Germacrene D

Details

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Internal ID 92822cfd-3459-42c9-8479-d248dd61040e
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Sesquiterpenoids > Germacrane sesquiterpenoids
IUPAC Name (1E,6E,8S)-1-methyl-5-methylidene-8-propan-2-ylcyclodeca-1,6-diene
SMILES (Canonical) CC1=CCCC(=C)C=CC(CC1)C(C)C
SMILES (Isomeric) C/C/1=C\CCC(=C)/C=C/[C@@H](CC1)C(C)C
InChI InChI=1S/C15H24/c1-12(2)15-10-8-13(3)6-5-7-14(4)9-11-15/h7-8,10,12,15H,3,5-6,9,11H2,1-2,4H3/b10-8+,14-7+/t15-/m0/s1
InChI Key GAIBLDCXCZKKJE-RXJOXMPGSA-N
Popularity 1,581 references in papers

Physical and Chemical Properties

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Molecular Formula C15H24
Molecular Weight 204.35 g/mol
Exact Mass 204.187800766 g/mol
Topological Polar Surface Area (TPSA) 0.00 Ų
XlogP 4.70

Synonyms

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Germacrene D
23986-74-5
V2I9ATG34E
UNII-V2I9ATG34E
(1E,6E,8S)-1-methyl-5-methylidene-8-propan-2-ylcyclodeca-1,6-diene
1(10),4(14),5-Germacratriene
(1E,6E,8S)-1-methyl-5-methylidene-8-(propan-2-yl)cyclodeca-1,6-diene
(1E,5E)-germacra-1(10),4(15),5-triene
(1E,6E,8S)-8-isopropyl-1-methyl-5-methylenecyclodeca-1,6-diene
(1E,6E,8S)-1-methyl-8-(1-methylethyl)-5-methylidenecyclodeca-1,6-diene
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Germacrene D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
No predicted properties yet!

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.74% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.64% 95.56%
CHEMBL3359 P21462 Formyl peptide receptor 1 84.30% 93.56%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 83.74% 96.47%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 82.76% 97.23%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 82.73% 91.11%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.14% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.13% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.45% 97.09%
CHEMBL1871 P10275 Androgen Receptor 81.33% 96.43%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.89% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Abies pinsapo
Acanthospermum hispidum
Achillea abrotanoides
Achillea ptarmica
Achillea ptarmica subsp. ptarmica
Acinos alpinus
Acorus calamus
Acorus calamus var. angustatus
Acorus gramineus
Acrisione denticulata
Acritopappus confertus
Acritopappus prunifolius
Adenocarpus foliolosus
Aframomum melegueta
Afrocarpus mannii
Agastache foeniculum
Agastache rugosa
Agathosma betulina
Ageratina anisochroma
Ageratina ixiocladon
Ageratina riparia
Ageratina tristis
Ageratum conyzoides
Ageratum fastigiatum
Aglaia lawii
Agrimonia pilosa
Ajuga chamaepitys
Aldama helianthoides
Alisma plantago-aquatica subsp. orientale
Aloe ferox
Aloysia citrodora
Alpinia chinensis
Amaioua guianensis
Ananas comosus
Anethum graveolens
Angelica archangelica
Angiopteris evecta
Angostura trifoliata
Aniba puchury-minor
Annona reticulata
Annona squamosa
Anthemis aciphylla
Anthoxanthum nitens
Araucaria columnaris
Arnica sachalinensis
Artabotrys lastoursvillensis
Artemisia absinthium
Artemisia alba
Artemisia annua
Artemisia argyi
Artemisia capillaris
Artemisia carvifolia
Artemisia douglasiana
Artemisia dracunculus
Artemisia filifolia
Artemisia frigida
Artemisia gmelinii
Artemisia judaica
Artemisia koidzumii
Artemisia lagocephala
Artemisia molinieri
Artemisia montana
Artemisia pallens
Artemisia palustris
Artemisia princeps
Artemisia schmidtiana
Arum maculatum
Aspilia africana
Aspilia mossambicensis
Aster altaicus
Asterolasia squamuligera
Athrixia elata
Atractylodes lancea
Austrobaileya scandens
Austrobrickellia patens
Austroeupatorium chaparense
Austroeupatorium inulaefolium
Ayapana amygdalina
Azolla pinnata subsp. asiatica
Baccharis dracunculifolia
Baccharis kingii
Baccharis minutiflora
Baccharis neglecta
Baccharis patagonica
Baccharis santelicis
Baccharis tricuneata
Baccharis trimera
Baccharis trinervis
Badilloa salicina
Bazzania praerupta
Bejaranoa balansae
Berchemia floribunda
Betula glandulosa
Betula maximowicziana
Bidens cynapiifolia
Bidens pilosa
Bishovia boliviensis
Blepharispermum zanguebaricum
Brachylaena discolor var. transvaalensis
Brickellia californica
Brickellia diffusa
Brickellia laciniata
Brickellia veronicaefolia
Bupleurum gibraltaricum
Byrsonima microphylla
Calanthe arisanensis
Calea clematidea
Calea harleyi
Calea morii
Calea prunifolia
Calea rotundifolia
Calea sickii
Callicarpa japonica
Callilepis salicifolia
Calypogeia muelleriana
Cananga odorata
Capillipedium parviflorum
Capsicum annuum
Caputia tomentosa
Carapichea ipecacuanha
Cassia roxburghii
Cassipourea guianensis
Catharanthus roseus
Cedrus libani
Centaurea armena
Centaurea solstitialis
Centella asiatica
Centratherum punctatum
Choisya arizonica
Chromolaena arnottiana
Chromolaena connivens
Chrysanthemum indicum
Chrysosplenium oppositifolium
Cinnamomum chekiangense
Cinnamomum parthenoxylon
Cistus creticus
Citrus × aurantium
Citrus deliciosa
Citrus maxima
Citrus medica
Citrus trifoliata
Cleistopholis patens
Cleonia lusitanica
Clethra macrophylla
Clibadium armanii
Clinopodium acinos
Clinopodium brownei
Clinopodium grandiflorum
Clinopodium pamphylicum
Clinopodium serpyllifolium subsp. fruticosum
Clinopodium troodi
Cnidium monnieri
Commiphora kataf
Conioselinum anthriscoides
Conioselinum smithii
Conioselinum tenuissimum
Conocliniopsis prasiifolia
Coreopsis grandiflora
Critonia hebebotrya
Crotalaria madurensis
Croton adenocalyx
Croton eluteria
Cryptomeria japonica
Cunila fasciculata
Curcuma aromatica
Curcuma kwangsiensis
Curcuma longa
Curcuma phaeocaulis
Curcuma wenyujin
Curcuma zedoaria
Curio talinoides
Cyclotrichium niveum
Cymbopogon nervatus
Cyperus erectus
Cyperus haspan
Daniellia oliveri
Daphne odora
Daucus carota
Dendropanax trifidus
Dimerostemma brasilianum
Dimerostemma lippioides
Diplostephium ericoides
Disynaphia multicrenulata
Duguetia flagellaris
Echinacea purpurea
Ekimia bornmuelleri
Elsholtzia ciliata
Encelia canescens
Entandrophragma cylindricum
Epimedium sagittatum
Eremanthus brasiliensis
Eremanthus crotonoides
Eremanthus glomerulatus
Eremanthus mollis
Erigeron annuus
Erigeron philadelphicus
Eriogonum nudum
Erythrina sandwicensis
Ethulia vernonioides subsp. vernonioides
Eucalyptus apodophylla
Eugenia uniflora
Eupatorium altissimum
Eupatorium cannabinum
Eupatorium serotinum
Euphorbia balsamifera
Falcaria vulgaris
Felicia erigeroides
Ferula feruloides
Ferulago thirkeana
Ferulago trachycarpa
Ficus carica
Ficus mucuso
Fleischmannia pratensis
Flourensia heterolepis
Flourensia macrophylla
Foeniculum vulgare
Geigeria aspera
Glebionis coronaria
Glehnia littoralis
Goniothalamus thwaitesii
Goyazianthus tetrastichus
Grazielia serrata
Grindelia hirsutula
Grindelia squarrosa
Guarea guidonia
Gutierrezia sarothrae
Gymnanthemum corymbosum
Gynoxys dielsiana
Gynoxys nitida
Halocarpus bidwillii
Halocarpus biformis
Hamamelis virginiana
Hansenia forbesii
Hansenia weberbaueriana
Haplopappus deserticola
Haplopappus marginalis
Hartwrightia floridana
Hebeclinium macrophyllum
Hedyosmum costaricense
Helichrysum glomeratum
Helichrysum herbaceum
Helichrysum splendidum
Helietta apiculata
Heliopsis buphthalmoides
Hemionitis cairon
Heracleum antasiaticum
Heracleum dissectum
Heracleum maximum
Hertia pallens
Heterotheca grandiflora
Hexalobus crispiflorus
Hilliardiella aristata
Hoslundia opposita
Humulus lupulus
Hyacinthoides hispanica
Hygrophila polysperma
Hymenocrater incanus
Hymenopappus scabiosaeus
Hymenothrix wislizeni
Hypericum androsaemum
Hypericum perfoliatum
Hypericum perforatum
Hypericum rumeliacum
Hyssopus officinalis
Ichthyothere connata
Ichthyothere terminalis
Illicium difengpi
Incarvillea emodi
Inezia integrifolia
Inulanthera tridens
Iris tectorum
Isocoma veneta
Iva annua
Jacobaea vulgaris
Juniperus comitana
Juniperus communis
Juniperus jaliscana
Juniperus monticola
Klasea erucifolia
Kleinia petraea
Koanophyllon albicaulis
Laggera alata
Lallemantia peltata
Lantana xenica
Larix gmelinii var. gmelinii
Larix laricina
Lasianthaea fruticosa
Lasiolaena morii
Lavandula angustifolia
Lavandula latifolia
Leonurus japonicus
Lepechinia chamaedryoides
Lepechinia floribunda
Lessingianthus compactiflorus
Leucanthemum maximum
Leuzea carthamoides
Levisticum officinale
Liatris squarrosa
Ligularia fischeri
Ligularia thyrsoidea
Ligusticum officinale
Lindera aggregata
Lippia alba
Lippia multiflora
Liquidambar styraciflua
Litsea cubeba
Lomatia silaifolia
Lonicera japonica
Loxothysanus sinuatus
Magnolia balansae
Magnolia obovata
Magnolia officinalis
Marrubium parviflorum
Marsypianthes chamaedrys
Mattfeldanthus andrade-limae
Melissa officinalis
Mentha × piperita
Mentha × verticillata
Mentha spicata
Mentha suaveolens
Merremia hirta
Microglossa pyrifolia
Microglossa pyrrhopappa
Micromeria cremnophila
Micromeria myrtifolia
Mikania arrojadoi
Mikania goyazensis
Mikania hookeriana
Milleria quinqueflora
Minthostachys andina
Minthostachys glabrescens
Montanoa hibiscifolia
Morina persica
Moringa oleifera
Mosla cavaleriei
Mosla chinensis
Mucuna sloanei
Mulguraea tridens
Murraya exotica
Murraya paniculata
Mutisia retrorsa
Myrrhis odorata
Myrtus communis
Nassauvia aculeata
Nassauvia darwinii
Neomirandea arthodes
Nepeta nuda
Nepeta racemosa
Nepeta tenuifolia
Nepeta trachonitica
Nervilia fordii
Nicotiana alata
Nidorella auriculata
Nidorella podocephala
Nidorella welwitschii
Ocimum basilicum
Ocimum gratissimum
Ocimum gratissimum subsp. gratissimum
Olearia phlogopappa
Ophryosporus floribundus
Origanum × adanense
Origanum acutidens
Origanum laevigatum
Origanum majoricum
Origanum vulgare
Osteospermum thodei
Oyedaea verbesinoides
Pachylobus normandii
Packera coahuilensis
Panax ginseng
Panax notoginseng
Panax quinquefolius
Pappobolus stuebelii
Pegolettia senegalensis
Pelargonium citronellum
Pelargonium endlicherianum
Pelargonium quercifolium
Pelargonium vitifolium
Perilla frutescens
Perilla frutescens var. hirtella
Persea americana
Persicaria bistorta
Persicaria minor
Perymeniopsis ovalifolia
Perymenium featherstonei
Peucedanum zenkeri
Picea sitchensis
Picradeniopsis multiflora
Pimenta racemosa
Pinus pinaster
Pinus sibirica
Pinus sylvestris
Pinus sylvestris var. hamata
Piper aduncum
Piper auritum
Piper cernuum
Piper corcovadense
Piper cubeba
Piper fimbriulatum
Piper gaudichaudianum
Piper guineense
Piper nigrum
Piper pseudofuligineum
Piper regnellii
Pittosporum viridiflorum
Planaltoa lychnophoroides
Platostoma africanum
Pluchea dioscoridis
Polemannia montana
Polygala reinii
Polygonatum falcatum
Polymnia canadensis
Polyscias fruticosa
Porcelia macrocarpa
Porella canariensis
Prangos heyniae
Prangos uechtritzii
Prumnopitys ferruginoides
Pseudocedrela kotschyi
Pseudognaphalium oligandrum
Pseudotaxus chienii
Psiadia altissima
Pteronia camphorata
Pycnanthemum floridanum
Pyrola rotundifolia
Pyrrosia davidii
Raulinoa echinata
Retama raetam subsp. bovei
Rhamnus fallax
Riccia fluitans
Roldana barba-johannis
Rothmannia urcelliformis
Rubia schumanniana
Sabal causiarum
Salmea scandens
Salvia absconditiflora
Salvia caespitosa
Salvia iodantha
Salvia nemorosa
Salvia sahendica
Salvia sclarea
Salvia virgata
Santolina chamaecyparissus
Santolina rosmarinifolia
Satureja spicigera
Satureja wiedemanniana
Scandix australis
Schinus molle
Schisandra chinensis
Schistostephium crataegifolium
Schkuhria schkuhrioides
Senecio bergii
Senecio brasiliensis
Senecio coronatus
Senecio gallicus
Senecio lanceus
Senecio lydenburgensis
Senecio pachyphyllos
Senecio philippicus
Senecio richii
Senecio ruwenzoriensis
Senecio subrubriflorus
Senecio subsessilis
Sequoia sempervirens
Shorea robusta
Sideritis brevidens
Sideritis condensata
Sideritis congesta
Sideritis dichotoma
Sideritis hirsuta
Sideritis hispida
Sideritis lyciae
Sideritis montana
Sideritis perfoliata subsp. athoa
Sideritis tragoriganum
Silphium perfoliatum
Smallanthus glabratus
Smallanthus uvedalia
Solanecio biafrae
Solanum stuckertii
Solanum tuberosum
Solidago canadensis
Solidago flexicaulis
Solidago gigantea
Solidago odora
Solidago spathulata
Spiranthera odoratissima
Stachys aegyptiaca
Stachys obliqua
Steganotaenia araliacea
Stevia alpina
Stevia amambayensis
Stevia andina
Stevia chamaedrys
Stevia rebaudiana
Stevia yaconensis
Stilpnopappus glomeratus
Strychnos tomentosa
Swertia decora
Symphyopappus reticulatus
Syncretocarpus sericeus
Synedrella nodiflora
Syneilesis aconitifolia
Syzygium nervosum
Tagetes minuta
Tamaulipa azurea
Tanacetum annuum
Tanacetum parthenium
Tanacetum vulgare
Tasmannia lanceolata
Tessaria fastigiata
Teucrium melissoides
Teucrium montanum
Teucrium polium
Thymus camphoratus
Thymus kotschyanus
Thymus longicaulis
Thymus nummularius
Thymus praecox subsp. polytrichus
Thymus quinquecostatus
Thymus subcollinus
Thymus thracicus
Thymus vulgaris
Thymus willkommii
Thymus zygioides
Tordylium apulum
Torilis japonica
Trichogonia villosa
Tripleurospermum inodorum
Tritomaria quinquedentata
Trixis divaricata subsp. divaricata
Trixis pterocaulis
Ursinia abrotanifolia
Ursinia serrata
Uvaria chamae
Valeriana officinalis
Varronia curassavica
Veratrum viride var. eschscholtzianum
Verbesina glabrata
Verbesina sordescens
Vernonia colorata
Viguiera grammatoglossa
Virola surinamensis
Vitex agnus-castus
Vitex negundo
Wedelia hookeriana
Wedelia regis
Wunderlichia mirabilis
Wurfbainia longiligularis
Wurfbainia villosa
Wurfbainia villosa var. xanthioides
Xanthium spinosum subsp. spinosum
Zanthoxylum bungeanum
Zanthoxylum schinifolium
Zanthoxylum simulans
Zingiber officinale
Zinnia elegans
Zinnia peruviana

Cross-Links

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PubChem 5317570
NPASS NPC120926
ChEMBL CHEMBL105432
LOTUS LTS0059194
wikiData Q27121450