Umbelliferone

Details

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Internal ID 02ee4fc9-1ebc-4b9e-8363-37cf00d91b61
Taxonomy Phenylpropanoids and polyketides > Coumarins and derivatives > Hydroxycoumarins > 7-hydroxycoumarins
IUPAC Name 7-hydroxychromen-2-one
SMILES (Canonical) C1=CC(=CC2=C1C=CC(=O)O2)O
SMILES (Isomeric) C1=CC(=CC2=C1C=CC(=O)O2)O
InChI InChI=1S/C9H6O3/c10-7-3-1-6-2-4-9(11)12-8(6)5-7/h1-5,10H
InChI Key ORHBXUUXSCNDEV-UHFFFAOYSA-N
Popularity 3,238 references in papers

Physical and Chemical Properties

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Molecular Formula C9H6O3
Molecular Weight 162.14 g/mol
Exact Mass 162.031694049 g/mol
Topological Polar Surface Area (TPSA) 46.50 Ų
XlogP 1.60
Atomic LogP (AlogP) 1.50
H-Bond Acceptor 3
H-Bond Donor 1
Rotatable Bonds 0

Synonyms

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7-hydroxycoumarin
93-35-6
7-Hydroxy-2H-chromen-2-one
Hydrangin
Skimmetin
7-hydroxycoumarine
Hydrangine
Skimmetine
7-Oxycoumarin
Umbelliferon
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Umbelliferone

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9932 99.32%
Caco-2 + 0.9313 93.13%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.5575 55.75%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior - 0.7738 77.38%
OATP1B3 inhibitior + 0.9858 98.58%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior - 0.9345 93.45%
P-glycoprotein inhibitior - 0.9682 96.82%
P-glycoprotein substrate - 0.9355 93.55%
CYP3A4 substrate - 0.7341 73.41%
CYP2C9 substrate - 0.8392 83.92%
CYP2D6 substrate - 0.8390 83.90%
CYP3A4 inhibition - 0.8380 83.80%
CYP2C9 inhibition - 0.8700 87.00%
CYP2C19 inhibition - 0.7922 79.22%
CYP2D6 inhibition - 0.9420 94.20%
CYP1A2 inhibition + 0.8298 82.98%
CYP2C8 inhibition - 0.8351 83.51%
CYP inhibitory promiscuity - 0.9069 90.69%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9413 94.13%
Carcinogenicity (trinary) Non-required 0.4671 46.71%
Eye corrosion - 0.9232 92.32%
Eye irritation + 1.0000 100.00%
Skin irritation + 0.8174 81.74%
Skin corrosion - 0.9909 99.09%
Ames mutagenesis - 0.6700 67.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8444 84.44%
Micronuclear + 0.7759 77.59%
Hepatotoxicity + 0.5033 50.33%
skin sensitisation - 0.7792 77.92%
Respiratory toxicity - 0.7222 72.22%
Reproductive toxicity + 0.6000 60.00%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.5582 55.82%
Acute Oral Toxicity (c) III 0.5546 55.46%
Estrogen receptor binding - 0.5303 53.03%
Androgen receptor binding + 0.7237 72.37%
Thyroid receptor binding - 0.6406 64.06%
Glucocorticoid receptor binding + 0.6663 66.63%
Aromatase binding + 0.6378 63.78%
PPAR gamma + 0.6014 60.14%
Honey bee toxicity - 0.9426 94.26%
Biodegradation + 0.5500 55.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.8563 85.63%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 28183.8 nM
Potency
via CMAUP
CHEMBL3577 P00352 Aldehyde dehydrogenase 1A1 28183.8 nM
Potency
via CMAUP
CHEMBL1900 P15121 Aldose reductase 22900 nM
IC50
PMID: 20805028
CHEMBL2524 P06280 Alpha-galactosidase A 35481.3 nM
Potency
via CMAUP
CHEMBL3594 Q16790 Carbonic anhydrase IX 482 nM
478 nM
480 nM
24.9 nM
Ki
Ki
Ki
Ki
PMID: 21067924
PMID: 22077347
PMID: 26688270
via Super-PRED
CHEMBL3242 O43570 Carbonic anhydrase XII 754 nM
750 nM
45.1 nM
Ki
Ki
Ki
PMID: 22077347
PMID: 26688270
via Super-PRED
CHEMBL4801 P29466 Caspase-1 19952.6 nM
Potency
via CMAUP
CHEMBL3468 P55210 Caspase-7 15848.9 nM
Potency
via CMAUP
CHEMBL4159 Q99714 Endoplasmic reticulum-associated amyloid beta-peptide-binding protein 25118.9 nM
Potency
via CMAUP
CHEMBL1293226 B2RXH2 Lysine-specific demethylase 4D-like 14125.4 nM
Potency
via CMAUP
CHEMBL2608 P10253 Lysosomal alpha-glucosidase 31622.8 nM
Potency
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.56% 91.11%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 90.50% 83.57%
CHEMBL2581 P07339 Cathepsin D 88.25% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.03% 94.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 84.95% 90.71%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.62% 99.23%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.22% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 82.98% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Abies nephrolepis
Acer caudatifolium
Achillea arabica
Aconitum heterophyllum
Adonis mongolica
Adonis tianschanicus
Aegle marmelos
Aeonium cuneatum
Aframomum daniellii
Agathis macrophylla
Ageratina adenophora
Ageratina tomentella
Alchornea cordifolia
Allium rotundum
Aloe arborescens
Althaea officinalis
Ammi majus
Anethum graveolens
Angelica acutiloba
Angelica anomala
Angelica archangelica
Angelica dahurica
Angelica decursiva
Angelica genuflexa
Angelica gigas
Angelica japonica
Angelica keiskei
Angelica pachycarpa
Angelica pubescens
Angelica sinensis
Aniba rosodora
Apium graveolens
Aralia continentalis
Aralia fargesii
Artemisia abrotanum
Artemisia absinthium
Artemisia alba
Artemisia anomala
Artemisia argyi
Artemisia capillaris
Artemisia dracunculus
Artemisia gilvescens
Artemisia gmelinii
Artemisia laciniata
Artemisia latifolia
Artemisia marschalliana
Artemisia minor
Artemisia mongolica
Artemisia montana
Artemisia nova
Artemisia ordosica
Artemisia palustris
Artemisia pedemontana subsp. assoana
Artemisia princeps
Artemisia tridentata
Artemisia vulgaris
Artemisia xanthochroa
Asimina parviflora
Asterolasia phebalioides
Asterolasia trymalioides
Astilbe rubra
Astragalus brachycarpus
Astragalus onobrychis
Astragalus pycnocephalus
Astragalus sinicus
Atalantia buxifolia
Atalantia racemosa
Atalantia wightii
Atractylodes lancea
Atractylodes macrocephala
Atraphaxis spinosa
Atropa belladonna
Ayapana triplinervis
Baccharis macraei
Baccharis neglecta
Baccharis trinervis
Balanophora japonica
Bidens tripartita
Biebersteinia orphanidis
Blechnum vulcanicum
Boenninghausenia albiflora
Boronia muelleri
Breonadia salicina
Brosimum gaudichaudii
Bulbophyllum crabro
Butea monosperma
Calea villosa
Calendula officinalis
Callisia fragrans
Caltha palustris
Camellia sinensis
Caragana frutex
Caragana spinosa
Caralluma stalagmifera
Carthamus tinctorius
Casimiroa edulis
Castanopsis eyrei
Centaurea cuneifolia subsp. cuneifolia
Centaurea solstitialis
Chamaecyparis formosensis
Chamaecyparis obtusa
Chaptalia integerrima
Chondrodendron tomentosum
Chromolaena subscandens
Chuquiraga ulicina
Cicer arietinum
Cicuta virosa
Citrus × aurantium
Citrus maxima
Citrus medica
Citrus trifoliata
Clausena anisata
Clausena anisum-olens
Clausena excavata
Clausena lansium
Clerodendrum bungei
Colchicum macedonicum
Coprosma acerosa
Coptis deltoidea
Coriandrum sativum
Coronilla scorpioides
Coronilla vaginalis
Coronilla valentina subsp. glauca
Corydalis persica
Corynanthe pachyceras
Cota tinctoria
Coussarea paniculata
Crataegus flava
Crowea exalata
Cruciata laevipes
Cryptocarya griffithiana
Cullen drupaceum
Cynoglossum amabile
Cynoglossum lanceolatum
Dalbergia frutescens
Daphne acutiloba
Daphne bholua
Daphne feddei
Daphne genkwa
Daphne mezereum
Daphne mucronata
Daphne odora
Daphne oleoides
Datura stramonium
Daucus carota
Deutzia corymbosa
Dicliptera riparia
Dictamnus albus
Dillenia papuana
Dioscorea gracillima
Diospyros ebenum
Diplostephium ericoides
Dipteryx odorata
Disynaphia multicrenulata
Dorstenia brasiliensis
Dorstenia convexa
Dorstenia excentrica
Drymaria cordata
Durio oxleyanus
Dystaenia takesimana
Echium italicum
Echium rubrum
Edgeworthia chrysantha
Eleutherococcus senticosus
Elsholtzia ciliata
Embelia parviflora
Embelia schimperi
Entada africana
Entada polystachya
Ephedra sinica
Epilobium hirsutum
Erigeron bonariensis
Eryngium campestre
Erysimum leptophyllum
Erythrina melanacantha
Erythroxylum passerinum
Esenbeckia leiocarpa
Eucalyptus decorticans
Eucalyptus viminalis
Eucommia ulmoides
Euphorbia caducifolia
Euphorbia ebracteolata
Euphorbia fischeriana
Euphorbia hirta
Euphorbia humifusa
Euphorbia jolkinii
Euphorbia lathyris
Euryops rupestris
Euthamia graminifolia
Faramea multiflora
Fatoua villosa
Ferula assa-foetida
Ferula diversivittata
Ferula gigantea
Ferula gummosa
Ferula iliensis
Ferula kokanica
Ferula litwinowiana
Ferula marmarica
Ferula moschata
Ferula persica
Ferula tadshikorum
Ferulago lutea
Ferulopsis hystrix
Ficus carica
Ficus elastica
Ficus nervosa
Ficus septica
Flemingia grahamiana
Foeniculum vulgare
Fumaria indica
Glebionis segetum
Glehnia littoralis
Glycosmis pseudoracemosa
Goniophlebium formosanum
Gymnocalycium schickendantzii
Gypothamnium pinifolium
Hansenia forbesii
Hansenia weberbaueriana
Haplophyllum obtusifolium
Haplophyllum patavinum
Haplophyllum villosum
Haplophyllum vulcanicum
Harbouria trachypleura
Helichrysum maracandicum
Helichrysum tenuifolium
Heracleum candicans
Heracleum lehmannianum
Heracleum yungningense
Heteroplexis microcephala
Holarrhena pubescens
Hydrangea chinensis
Hydrangea febrifuga
Hydrangea macrophylla
Hydrangea paniculata
Hydrangea serrata
Hydrocotyle leucocephala
Hymenocallis speciosa
Hymenophyllum nephrophyllum
Hypericum carinatum
Hypericum papuanum
Hypericum styphelioides
Iberis sempervirens
Ilex kaushue
Inula helenium
Inula thapsoides
Iphiona grantioides
Ipomoea aquatica
Ipomoea cairica
Ipomoea digitata
Ipomoea nil
Ipomoea purpurea
Isodon gesneroides
Isodon loxothyrsus
Juniperus chinensis
Juniperus drupacea
Juniperus horizontalis
Kalanchoe laciniata
Kaunia arbuscularis
Kitagawia praeruptora
Klasea centauroides subsp. strangulata
Laetia corymbulosa
Lathyrus tingitanus
Leontopodium nanum
Leucoptera nodosa
Ligularia pleurocaulis
Ligularia thyrsoidea
Limeum pterocarpum
Lindera glauca
Linnaea chinensis
Lithospermum canescens
Litsea verticillata
Lomatia hirsuta
Lonchocarpus salvadorensis
Lupinus formosus
Lythrum salicaria
Maclura tricuspidata
Mandragora officinarum
Marshallia graminifolia
Melicope hayesii
Melicope semecarpifolia
Melilotus albus
Melilotus indicus
Metrodorea nigra
Micromelum integerrimum
Mikania goyazensis
Monodora undulata
Monsonia senegalensis
Morus alba
Morus cathayana
Morus indica
Morus mongolica
Murraya koenigii
Murraya paniculata
Myrica rubra
Nama johnstonii
Naringi crenulata
Nassauvia aculeata
Nematolepis ovatifolia
Nicotiana tabacum
Oenanthe fistulosa
Onobrychis kemulariae
Onopordum acanthium
Ophioglossum petiolatum
Oxandra xylopioides
Oxytropis ochrocephala
Oyedaea verbesinoides
Palicourea alpina
Pancratium sickenbergeri
Parasenecio hastatus
Parastrephia quadrangularis
Paris dunniana
Pastinaca sativa
Peddiea fischeri
Persicaria mitis
Phaseolus vulgaris
Phellodendron amurense
Phellodendron chinense var. glabriusculum
Philotheca apiculata
Philotheca fitzgeraldii
Philotheca tomentella
Physochlaina physaloides
Picea neoveitchii
Picramnia antidesma
Picramnia hirsuta
Picramnia latifolia
Picramnia teapensis
Picrasma quassioides
Pimpinella anisum
Pinalia anomala
Pinus armandii
Piper regnellii
Plathymenia reticulata
Plectranthus caninus
Plectranthus verticillatus
Pleiospermium alatum
Poa huecu
Polygonatum orientale
Polygonum thunbergii
Pontederia crassipes
Portulaca oleracea
Posoqueria latifolia
Potentilla argentea
Potentilla erecta
Prangos ferulacea
Prangos latiloba
Prangos tschimganica
Prosopis cineraria
Prunella vulgaris
Prunus mahaleb
Prunus prostrata
Pseudobrickellia angustissima
Pseuduvaria trimera
Pteridium esculentum
Pteris spinescens
Pyrola calliantha
Rauvolfia salicifolia
Rhinacanthus nasutus
Rhinacanthus nasutus
Rhodiola chrysanthemifolia subsp. sacra
Rhodiola coccinea
Rhodiola heterodonta
Rhododendron dauricum
Rhododendron groenlandicum
Rhododendron lepidotum
Rhododendron mucronulatum
Rhododendron spinuliferum
Rhodomyrtus tomentosa
Roemeria carica
Rosa transmorrisonensis
Rubus xanthocarpus
Rumohra adiantiformis
Ruta chalepensis
Ruta graveolens
Ruta montana
Salacia cordata
Salix sieboldiana
Salvia officinalis subsp. oxyodon
Salvia xalapensis
Sambucus ebulus
Saussurea superba
Schumanniophyton magnificum
Scrophularia smithii
Selaginella pulvinata
Selaginella tamariscina
Semenovia dasycarpa
Senna spectabilis var. spectabilis
Seriphidium scotinum
Serratula coronata subsp. coronata
Seseli foliosum
Simarouba glauca
Sinacalia tangutica
Skimmia japonica
Skimmia laureola
Skimmia reevesiana
Solanum aculeatissimum
Solanum berthaultii
Solanum dasyphyllum
Solanum torvum
Sophora davidii
Sophora flavescens
Stellera chamaejasme
Stenocephalum megapotamicum
Stenocereus laevigatus
Strychnos spinosa
Syzygium polycephaloides
Syzygium sandwicense
Tagetes lucida
Tanacetum cadmeum
Tanacetum sinaicum
Tetradium glabrifolium
Teucrium pernyi
Tordylium apulum
Trifolium alexandrinum
Trifolium pratense
Triphasia trifolia
Triptilion spinosum
Typha domingensis
Uncaria hirsuta
Vachellia flava
Vahlia capensis
Varronia leucocephala
Vellozia nanuzae
Vernonanthura fagifolia
Viburnum cylindricum
Viburnum dilatatum
Vicia sativa
Vigna radiata var. radiata
Vincetoxicum indicum var. glabrum
Virola sebifera
Vitex limonifolia
Vitis vinifera
Wikstroemia canescens
Wikstroemia elliptica
Wikstroemia glabra
Wikstroemia hainanensis
Wikstroemia sikokiana
Wunderlichia mirabilis
Zanthoxylum ailanthoides
Zanthoxylum armatum
Zanthoxylum beecheyanum
Zanthoxylum rhoifolium
Zanthoxylum schinifolium
Zanthoxylum spinosum
Zanthoxylum wutaiense
Zanthoxylum zanthoxyloides
Zilla spinosa

Cross-Links

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PubChem 5281426
NPASS NPC247553
ChEMBL CHEMBL51628
LOTUS LTS0162728
wikiData Q416196