(-)-Catechin

Details

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Internal ID 8fd5a8c5-f509-492f-9f94-96c584e04e58
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavans > Catechins
IUPAC Name (2S,3R)-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol
SMILES (Canonical) C1C(C(OC2=CC(=CC(=C21)O)O)C3=CC(=C(C=C3)O)O)O
SMILES (Isomeric) C1[C@H]([C@@H](OC2=CC(=CC(=C21)O)O)C3=CC(=C(C=C3)O)O)O
InChI InChI=1S/C15H14O6/c16-8-4-11(18)9-6-13(20)15(21-14(9)5-8)7-1-2-10(17)12(19)3-7/h1-5,13,15-20H,6H2/t13-,15+/m1/s1
InChI Key PFTAWBLQPZVEMU-HIFRSBDPSA-N
Popularity 814 references in papers

Physical and Chemical Properties

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Molecular Formula C15H14O6
Molecular Weight 290.27 g/mol
Exact Mass 290.07903816 g/mol
Topological Polar Surface Area (TPSA) 110.00 Ų
XlogP 0.40
Atomic LogP (AlogP) 1.55
H-Bond Acceptor 6
H-Bond Donor 5
Rotatable Bonds 1

Synonyms

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18829-70-4
Catechin l-form
(-)-Catechol
(2S,3R)-2-(3,4-dihydroxyphenyl)chroman-3,5,7-triol
CATECHIN, ALPHA
Cianidanol, (-)-
(2S,3R)-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol
UNII-FHB0GX3D44
FHB0GX3D44
(2s,3r)-2-(3,4-dihydroxyphenyl)chromane-3,5,7-triol
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of (-)-Catechin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8922 89.22%
Caco-2 - 0.9406 94.06%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.4440 44.40%
OATP2B1 inhibitior - 0.5776 57.76%
OATP1B1 inhibitior + 0.8774 87.74%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9228 92.28%
P-glycoprotein inhibitior - 0.9411 94.11%
P-glycoprotein substrate - 0.9531 95.31%
CYP3A4 substrate - 0.5560 55.60%
CYP2C9 substrate - 0.8006 80.06%
CYP2D6 substrate + 0.5322 53.22%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9041 90.41%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9046 90.46%
CYP2C8 inhibition + 0.4599 45.99%
CYP inhibitory promiscuity - 0.8170 81.70%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5825 58.25%
Eye corrosion - 0.9901 99.01%
Eye irritation + 0.9629 96.29%
Skin irritation - 0.5859 58.59%
Skin corrosion - 0.9251 92.51%
Ames mutagenesis + 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4678 46.78%
Micronuclear + 0.8059 80.59%
Hepatotoxicity - 0.7375 73.75%
skin sensitisation - 0.7452 74.52%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.6250 62.50%
Nephrotoxicity - 0.6369 63.69%
Acute Oral Toxicity (c) IV 0.6433 64.33%
Estrogen receptor binding - 0.6719 67.19%
Androgen receptor binding + 0.6638 66.38%
Thyroid receptor binding + 0.7658 76.58%
Glucocorticoid receptor binding + 0.6993 69.93%
Aromatase binding + 0.6008 60.08%
PPAR gamma + 0.6832 68.32%
Honey bee toxicity - 0.8419 84.19%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 0.7342 73.42%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL5979 P05186 Alkaline phosphatase, tissue-nonspecific isozyme 407 nM
IC50
via Super-PRED
CHEMBL2326 P43166 Carbonic anhydrase VII 450 nM
Ki
via Super-PRED
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 28.2 nM
Potency
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.36% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 98.34% 91.49%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.87% 97.09%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 86.65% 99.15%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.55% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.27% 95.56%
CHEMBL1929 P47989 Xanthine dehydrogenase 85.19% 96.12%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 84.40% 93.40%
CHEMBL3194 P02766 Transthyretin 84.35% 90.71%
CHEMBL3401 O75469 Pregnane X receptor 81.47% 94.73%
CHEMBL3438 Q05513 Protein kinase C zeta 81.02% 88.48%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.01% 94.45%
CHEMBL4208 P20618 Proteasome component C5 80.01% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Abutilon theophrasti
Acacia adunca
Adiantum philippense
Agrimonia pilosa
Alcea rosea
Aldama incana
Aloe africana
Aloe ferox
Aloe spicata
Aloe vera
Alpinia roxburghii
Ancistrocladus korupensis
Annona cornifolia
Apocynum venetum
Arbutus unedo
Artemisia pedemontana subsp. assoana
Astragalus sempervirens
Avena sativa
Balanops australiana
Bauhinia racemosa
Begonia nantoensis
Betula papyrifera
Betula pendula subsp. mandshurica
Boehmeria nivea
Brassica juncea
Calostephane divaricata
Caragana aurantiaca
Centella asiatica
Chaenomeles sinensis
Chaenomeles speciosa
Chamaebatia foliolosa
Cinnamomum kotoense
Crataegus pinnatifida
Crateva religiosa
Cynomorium coccineum subsp. songaricum
Dalbergia assamica
Dasiphora fruticosa
Davallia perdurans
Dumortiera hirsuta
Echeveria secunda
Echinops transiliensis
Elsholtzia ciliata
Epimedium brevicornu
Epimedium grandiflorum
Epimedium koreanum
Epimedium pubescens
Epimedium sagittatum
Epimedium sempervirens
Epimedium wushanense
Eucalyptus melliodora
Euonymus alatus
Euonymus tingens
Euphorbia cornigera
Euphorbia hirta
Gardenia jasminoides
Ginkgo biloba
Glycyrrhiza uralensis
Gnetum latifolium
Goniothalamus malayanus
Gonzalezia decurrens
Haemanthus amarylloides
Hasteola suaveolens
Hedysarum inundatum
Hedysarum theinum
Herniaria fontanesii
Hippophae rhamnoides
Humulus lupulus
Hylocomium splendens
Hypericum laricifolium
Hypericum perforatum
Ipomoea digitata
Kokoona reflexa
Lantana montevidensis
Lanxangia tsaoko
Lepisorus ussuriensis
Lilium brownii
Lilium lancifolium
Lilium pumilum
Loranthus kaoi
Lysimachia mauritiana
Maesa ramentacea
Marrubium anisodon
Millettia laurentii
Mitracarpus hirtus
Monodora tenuifolia
Mosla chinensis
Murraya exotica
Murraya paniculata
Muscari botryoides
Myristica fragrans
Naucleopsis ternstroemiiflora
Nelumbo nucifera
Ocimum tenuiflorum
Ocotea pittieri
Olearia pimeleoides
Paeonia suffruticosa
Pastinaca sativa
Peltostigma guatemalense
Persicaria bistorta
Persicaria hydropiper
Persicaria orientalis
Pinus strobus
Pinus sylvestris
Pluchea odorata
Podocarpus macrophyllus
Polygonum perfoliatum
Premna odorata
Pseudocedrela kotschyi
Punica granatum
Rauvolfia vomitoria
Reynoutria japonica
Reynoutria multiflora
Rheum officinale
Rheum palmatum
Rheum tanguticum
Rhodanthe chlorocephala subsp. rosea
Rhodiola crenulata
Rosa laevigata
Rosa transmorrisonensis
Rubia cordifolia
Rubus chingii
Rubus coreanus
Rumex maritimus
Salacia lehmbachii
Salvia castanea
Salvia miltiorrhiza
Salvia syriaca
Salvia yosgadensis
Sanguisorba officinalis
Scutellaria amoena
Senegalia catechu
Sideritis brevibracteata
Sideroxylon cubense
Sinapis alba
Smilax china
Smilax corbularia
Smilax glabra
Solanum laxum
Solanum nigrum
Spatholobus suberectus
Stellaria holostea
Swertia franchetiana
Terminalia argentea
Thalictrum flavum
Trachycarpus fortunei
Ulmus davidiana
Uncaria gambir
Uncaria macrophylla
Uncaria rhynchophylla
Uncaria sinensis
Vaccinium oxycoccos
Vepris gerrardii
Vigna angularis
Vigna umbellata
Vitis vinifera
Wikstroemia retusa
Zanthoxylum bungeanum
Zanthoxylum schinifolium
Zanthoxylum tetraspermum
Zingiber officinale
Ziziphus jujuba
Ziziphus mauritiana

Cross-Links

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PubChem 73160
NPASS NPC15658
ChEMBL CHEMBL200715
LOTUS LTS0088008
wikiData Q27115730