Procyanidin B1

Details

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Internal ID b608fb80-9075-4a5b-a9c2-c39543b373a9
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Biflavonoids and polyflavonoids
IUPAC Name (2R,3S)-2-(3,4-dihydroxyphenyl)-8-[(2R,3R,4R)-2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-3,4-dihydro-2H-chromen-4-yl]-3,4-dihydro-2H-chromene-3,5,7-triol
SMILES (Canonical) C1C(C(OC2=C1C(=CC(=C2C3C(C(OC4=CC(=CC(=C34)O)O)C5=CC(=C(C=C5)O)O)O)O)O)C6=CC(=C(C=C6)O)O)O
SMILES (Isomeric) C1[C@@H]([C@H](OC2=C1C(=CC(=C2[C@@H]3[C@H]([C@H](OC4=CC(=CC(=C34)O)O)C5=CC(=C(C=C5)O)O)O)O)O)C6=CC(=C(C=C6)O)O)O
InChI InChI=1S/C30H26O12/c31-13-7-20(37)24-23(8-13)41-29(12-2-4-16(33)19(36)6-12)27(40)26(24)25-21(38)10-17(34)14-9-22(39)28(42-30(14)25)11-1-3-15(32)18(35)5-11/h1-8,10,22,26-29,31-40H,9H2/t22-,26+,27+,28+,29+/m0/s1
InChI Key XFZJEEAOWLFHDH-UKWJTHFESA-N
Popularity 353 references in papers

Physical and Chemical Properties

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Molecular Formula C30H26O12
Molecular Weight 578.50 g/mol
Exact Mass 578.14242626 g/mol
Topological Polar Surface Area (TPSA) 221.00 Ų
XlogP 2.40
Atomic LogP (AlogP) 3.00
H-Bond Acceptor 12
H-Bond Donor 10
Rotatable Bonds 3

Synonyms

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20315-25-7
Proanthocyanidin B1
Procyanidin dimer B1
CHEBI:75633
UNII-0566J48E7X
EC-(4b,8)-C
PROCYANIDOL B1
0566J48E7X
Epicatechin-(4beta->8)-ent-epicatechin
Endotelon
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Procyanidin B1

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8698 86.98%
Caco-2 - 0.9107 91.07%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.4793 47.93%
OATP2B1 inhibitior - 0.5605 56.05%
OATP1B1 inhibitior + 0.9408 94.08%
OATP1B3 inhibitior + 0.9459 94.59%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.9057 90.57%
P-glycoprotein inhibitior + 0.6991 69.91%
P-glycoprotein substrate - 0.8066 80.66%
CYP3A4 substrate + 0.5743 57.43%
CYP2C9 substrate - 0.5994 59.94%
CYP2D6 substrate + 0.5264 52.64%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9026 90.26%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9155 91.55%
CYP2C8 inhibition + 0.6770 67.70%
CYP inhibitory promiscuity - 0.8625 86.25%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6139 61.39%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.8204 82.04%
Skin irritation - 0.6044 60.44%
Skin corrosion - 0.9317 93.17%
Ames mutagenesis + 0.6700 67.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8993 89.93%
Micronuclear + 0.7859 78.59%
Hepatotoxicity - 0.7375 73.75%
skin sensitisation - 0.7665 76.65%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.8000 80.00%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity - 0.6052 60.52%
Acute Oral Toxicity (c) IV 0.5696 56.96%
Estrogen receptor binding + 0.7555 75.55%
Androgen receptor binding + 0.7545 75.45%
Thyroid receptor binding + 0.6710 67.10%
Glucocorticoid receptor binding + 0.5949 59.49%
Aromatase binding - 0.5919 59.19%
PPAR gamma + 0.7488 74.88%
Honey bee toxicity - 0.7797 77.97%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.6855 68.55%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.52% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 98.87% 83.82%
CHEMBL1951 P21397 Monoamine oxidase A 96.88% 91.49%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.71% 96.09%
CHEMBL1929 P47989 Xanthine dehydrogenase 93.59% 96.12%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.66% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.86% 89.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.20% 99.15%
CHEMBL2535 P11166 Glucose transporter 86.62% 98.75%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.17% 95.56%
CHEMBL4208 P20618 Proteasome component C5 84.92% 90.00%
CHEMBL3401 O75469 Pregnane X receptor 84.40% 94.73%
CHEMBL3194 P02766 Transthyretin 83.39% 90.71%
CHEMBL236 P41143 Delta opioid receptor 83.31% 99.35%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.46% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Acacia adunca
Aconitum liangshanicum
Aconitum sachalinense
Adiantum philippense
Aesculus hippocastanum
Ageratina gracilis
Aizoon africanum
Alangium premnifolium
Alcea rosea
Aldama incana
Alhagi sparsifolia
Alkanna cappadocica
Alpinia roxburghii
Alstonia deplanchei
Angelica tarokoensis
Annona cornifolia
Areca catechu
Artemisia pedemontana subsp. assoana
Artemisia rupestris subsp. rupestris
Asteriscus graveolens
Astragalus sempervirens
Atalantia racemosa
Baccharis megapotamica
Balanops australiana
Bischofia javanica
Bombax ceiba
Bromelia karatas
Buddleja cordata
Calostephane divaricata
Camellia sinensis
Campylotropis hirtella
Capnoides sempervirens
Caragana aurantiaca
Centrosema pascuorum
Ceratozamia fuscoviridis
Chaenomeles sinensis
Chaenomeles speciosa
Chamaecrista kleinii
Cinnamomum aromaticum
Cinnamomum bejolghota
Cinnamomum burmanni
Cinnamomum camphora
Cistus × incanus
Citrus glauca
Cola nitida
Coleogyne ramosissima
Cornus kousa
Crambe tatarica
Crataegus monogyna
Critonia quadrangularis
Croton lechleri
Cynomorium coccineum subsp. songaricum
Davallia perdurans
Dioscorea bulbifera
Dioscorea cirrhosa
Diospyros eriantha
Diospyros ferrea
Dumortiera hirsuta
Echeveria secunda
Epimedium davidii
Eriobotrya japonica
Erysimum odoratum
Erythroxylum novogranatense
Eucalyptus melliodora
Eucalyptus ovata
Euonymus tingens
Euphorbia cornigera
Fagopyrum acutatum
Ficus simplicissima
Flemingia macrophylla
Fragaria vesca
Fritillaria monantha
Frullania tamarisci
Globba variabilis
Gnetum latifolium
Goniothalamus malayanus
Gonzalezia decurrens
Gynura bicolor
Haplophyllum dauricum
Hedysarum inundatum
Helianthus maximiliani
Heterotheca inuloides
Hoffmannia strigillosa
Houttuynia cordata
Humulus lupulus
Hylocomium splendens
Hypericum japonicum
Hypericum laricifolium
Hypericum perforatum
Ilex amara
Ipomoea digitata
Isodon japonicus
Kandelia candel
Knightia excelsa
Kokoona reflexa
Lasiosiphon lampranthus
Leonurus glaucescens
Lepidium draba
Lepisorus ussuriensis
Lotus pedunculatus
Lysimachia mauritiana
Maesa ramentacea
Malus pumila
Marrubium anisodon
Marrubium supinum
Metalasia capitata
Micromeria pineolens
Millettia erythrocalyx
Millettia laurentii
Monodora tenuifolia
Myrsine lancifolia
Naucleopsis ternstroemiiflora
Nelumbo nucifera
Neolitsea cassia
Ocimum tenuiflorum
Ocotea pittieri
Ononis vaginalis
Orthosphenia mexicana
Oxyanthus speciosus
Pastinaca sativa
Paullinia cupana
Peltostigma guatemalense
Phaseolus vulgaris
Pinus strobus
Pinus sylvestris
Platycodon grandiflorus
Pluchea odorata
Premna odorata
Prunus persica
Pseudotsuga menziesii
Psidium guajava
Pteris semipinnata
Pyrola asarifolia subsp. asarifolia
Quercus dentata
Quercus miyagii
Quercus petraea subsp. petraea
Raulinoreitzia crenulata
Rauvolfia vomitoria
Reynoutria multiflora
Rheum tanguticum
Rhodanthe chlorocephala subsp. rosea
Rhododendron dauricum
Rhynchopsidium pumilum
Rumex acetosa
Rumex maritimus
Salacia lehmbachii
Salacia madagascariensis
Salix sieboldiana
Salvia hispanica
Salvia syriaca
Salvia yosgadensis
Saraca asoca
Saussurea lyrata
Scorzonera pseudodivaricata
Scutellaria amoena
Senecio latifolius
Senecio peripotamus
Sideritis brevibracteata
Sideroxylon cubense
Solanum acaule
Solanum elaeagnifolium
Solanum laxum
Stenocereus griseus
Stevia mercedensis
Strychnos tabascana
Styrax hookeri
Swertia delavayi
Swertia franchetiana
Swinglea glutinosa
Syncarpia hillii
Terminalia catappa
Theobroma cacao
Thuja standishii
Uncaria gambir
Uncaria macrophylla
Uncaria rhynchophylla
Uncaria sinensis
Vaccinium oxycoccos
Vaccinium vitis-idaea
Vateria indica
Vepris hiernii
Verbesina rupestris
Vicia faba
Vigna angularis
Vismia jefensis
Vitis vinifera
Wikstroemia retusa
Zanthoxylum tetraspermum

Cross-Links

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PubChem 11250133
NPASS NPC108811
ChEMBL CHEMBL504937
LOTUS LTS0066122
wikiData Q7247551