Esculin

Details

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Internal ID 7f073baf-3129-4939-af49-ab75707bea49
Taxonomy Phenylpropanoids and polyketides > Coumarins and derivatives > Coumarin glycosides
IUPAC Name 7-hydroxy-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-2-one
SMILES (Canonical) C1=CC(=O)OC2=CC(=C(C=C21)OC3C(C(C(C(O3)CO)O)O)O)O
SMILES (Isomeric) C1=CC(=O)OC2=CC(=C(C=C21)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O
InChI InChI=1S/C15H16O9/c16-5-10-12(19)13(20)14(21)15(24-10)23-9-3-6-1-2-11(18)22-8(6)4-7(9)17/h1-4,10,12-17,19-21H,5H2/t10-,12-,13+,14-,15-/m1/s1
InChI Key XHCADAYNFIFUHF-TVKJYDDYSA-N
Popularity 5,071 references in papers

Physical and Chemical Properties

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Molecular Formula C15H16O9
Molecular Weight 340.28 g/mol
Exact Mass 340.07943208 g/mol
Topological Polar Surface Area (TPSA) 146.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -1.32
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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aesculin
531-75-9
Esculoside
Bicolorin
Enallachrome
Escosyl
(-)-Esculin
6,7-Dihydroxycoumarin 6-glucoside
Esculetin 6-O-glucoside
Aesculinum
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Esculin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5923 59.23%
Caco-2 - 0.8934 89.34%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.5362 53.62%
OATP2B1 inhibitior - 0.8466 84.66%
OATP1B1 inhibitior + 0.9128 91.28%
OATP1B3 inhibitior + 0.9389 93.89%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.9323 93.23%
P-glycoprotein inhibitior - 0.9292 92.92%
P-glycoprotein substrate - 0.9074 90.74%
CYP3A4 substrate - 0.5324 53.24%
CYP2C9 substrate - 0.8141 81.41%
CYP2D6 substrate - 0.8577 85.77%
CYP3A4 inhibition - 0.9207 92.07%
CYP2C9 inhibition - 0.9414 94.14%
CYP2C19 inhibition - 0.9119 91.19%
CYP2D6 inhibition - 0.9327 93.27%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition - 0.7337 73.37%
CYP inhibitory promiscuity - 0.8472 84.72%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7090 70.90%
Eye corrosion - 0.9928 99.28%
Eye irritation - 0.7361 73.61%
Skin irritation - 0.7983 79.83%
Skin corrosion - 0.9715 97.15%
Ames mutagenesis - 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7961 79.61%
Micronuclear + 0.6033 60.33%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.8796 87.96%
Respiratory toxicity - 0.5333 53.33%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.7503 75.03%
Acute Oral Toxicity (c) III 0.4513 45.13%
Estrogen receptor binding + 0.5885 58.85%
Androgen receptor binding - 0.5515 55.15%
Thyroid receptor binding + 0.5288 52.88%
Glucocorticoid receptor binding + 0.8840 88.40%
Aromatase binding + 0.6276 62.76%
PPAR gamma + 0.6078 60.78%
Honey bee toxicity - 0.8425 84.25%
Biodegradation - 0.6000 60.00%
Crustacea aquatic toxicity - 0.7099 70.99%
Fish aquatic toxicity + 0.7790 77.90%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 1584.9 nM
Potency
via CMAUP
CHEMBL3577 P00352 Aldehyde dehydrogenase 1A1 707.9 nM
707.9 nM
Potency
Potency
via CMAUP
via Super-PRED
CHEMBL4801 P29466 Caspase-1 3981.1 nM
Potency
via CMAUP
CHEMBL3468 P55210 Caspase-7 3981.1 nM
Potency
via CMAUP
CHEMBL4159 Q99714 Endoplasmic reticulum-associated amyloid beta-peptide-binding protein 7943.3 nM
Potency
via CMAUP
CHEMBL1293226 B2RXH2 Lysine-specific demethylase 4D-like 43351.7 nM
Potency
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.79% 91.11%
CHEMBL220 P22303 Acetylcholinesterase 98.11% 94.45%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.31% 94.00%
CHEMBL2581 P07339 Cathepsin D 91.37% 98.95%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 86.03% 83.57%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.79% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.35% 89.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.53% 86.92%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.38% 95.56%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.34% 90.71%
CHEMBL3401 O75469 Pregnane X receptor 83.29% 94.73%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 80.26% 99.15%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Acacia cambagei
Actinidia chinensis
Adina eurhyncha
Aesculus hippocastanum
Afraegle paniculata
Agave parryi var. huachucensis
Allium victorialis
Aloe vera
Althaea officinalis
Angelica dahurica
Angiopteris helferiana
Aniba rosodora
Anisomeles indica
Anomospermum grandifolium
Arabidopsis thaliana
Arnica viscosa
Artemisia absinthium
Artemisia jacutica
Artemisia tridentata
Artemisia vulgaris
Aster alpinus
Berberis crataegina
Blepharis scindica
Boophone disticha
Bruguiera cylindrica
Calceolaria thyrsiflora
Calophyllum thwaitesii
Catunaregam longispina
Centaurea diffusa
Cichorium intybus
Cichorium pumilum
Ciliosemina pedunculata
Cistus creticus
Clarkia unguiculata
Coptis trifolia
Crataegus monogyna
Crataegus pontica
Croton steenkampianus
Crowea exalata
Cryptocarya griffithiana
Cynara cornigera
Dahlstedtia pinnata
Daphne aurantiaca
Daphne gnidioides
Daphne papyracea
Datura stramonium
Dermatophyllum secundiflorum
Dictamnus albus
Durio oxleyanus
Ecbolium ligustrinum
Echinocystis lobata
Erigeron bonariensis
Erinus alpinus
Euphorbia lathyris
Felicia amelloides
Ficus septica
Flemingia grahamiana
Foeniculum vulgare
Fraxinus angustifolia subsp. oxycarpa
Fraxinus chinensis
Fraxinus chinensis subsp. chinensis
Fraxinus chinensis subsp. rhynchophylla
Fraxinus excelsior
Fraxinus floribunda
Fraxinus insularis
Fraxinus ornus
Fraxinus stylosa
Fritillaria taipaiensis
Frullania brittoniae
Garcinia cantleyana
Geranium macrorrhizum
Gundelia tournefortii
Gypothamnium pinifolium
Helenium quadridentatum
Hordeum vulgare
Hydrophyllum tenuipes
Hymenodictyon orixense
Hypolaena fastigiata
Inulanthera dregeana
Isodon gesneroides
Ixeridium laevigatum
Jacobaea arnautorum
Kalanchoe marmorata
Koelpinia linearis
Latua pubiflora
Leionema gracile
Littorella uniflora
Lonicera korolkowii
Lupinus angustifolius
Machilus robusta
Maclura pomifera
Manihot esculenta
Melaleuca decora
Meryta denhamii
Mimosa invisa
Morinda citrifolia
Morus alba
Myrtus communis
Nama johnstonii
Nicotiana tabacum
Ocimum tenuiflorum
Olea europaea
Ostericum grossiserratum
Paramignya scandens
Pedicularis densispica
Penianthus zenkeri
Peucedanum japonicum
Phaseolus vulgaris
Phegopteris subaurita
Philotheca brucei
Phlomoides medicinalis
Podocarpus nivalis
Podophyllum hexandrum
Portulaca pilosa
Potentilla indica
Pteridium aquilinum
Pteris sinensis
Rhododendron groenlandicum
Rhododendron tomentosum
Rudbeckia hirta
Ruscus aculeatus
Schisandra arisanensis
Schraderanthus viscosa
Senecio macrophyllus
Senecio polyodon
Senna sophera
Solanum chacoense
Solanum stramoniifolium
Solanum virginianum
Sophora davidii
Stenostomum acutatum
Styphnolobium japonicum
Symphytum tuberosum
Taraxacum officinale
Teucrium pernyi
Thymus quinquecostatus var. przewalskii
Thymus transcaucasicus
Timonius eximius
Virola sebifera
Vitis vinifera

Cross-Links

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PubChem 5281417
NPASS NPC206264
ChEMBL CHEMBL482581
LOTUS LTS0105345
wikiData Q105348169