Pectolinarigenin

Details

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Internal ID f334cfd8-4eab-4f0c-a65f-63593898ce9a
Taxonomy Phenylpropanoids and polyketides > Flavonoids > O-methylated flavonoids > 6-O-methylated flavonoids
IUPAC Name 5,7-dihydroxy-6-methoxy-2-(4-methoxyphenyl)chromen-4-one
SMILES (Canonical) COC1=CC=C(C=C1)C2=CC(=O)C3=C(O2)C=C(C(=C3O)OC)O
SMILES (Isomeric) COC1=CC=C(C=C1)C2=CC(=O)C3=C(O2)C=C(C(=C3O)OC)O
InChI InChI=1S/C17H14O6/c1-21-10-5-3-9(4-6-10)13-7-11(18)15-14(23-13)8-12(19)17(22-2)16(15)20/h3-8,19-20H,1-2H3
InChI Key GPQLHGCIAUEJQK-UHFFFAOYSA-N
Popularity 173 references in papers

Physical and Chemical Properties

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Molecular Formula C17H14O6
Molecular Weight 314.29 g/mol
Exact Mass 314.07903816 g/mol
Topological Polar Surface Area (TPSA) 85.20 Ų
XlogP 2.00
Atomic LogP (AlogP) 2.89
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

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520-12-7
Pectolinaringenin
5,7-Dihydroxy-4',6-dimethoxyflavone
4'-Methylcapillarisin
5,7-Dihydroxy-6,4'-dimethoxyflavone
5,7-Dihydroxy-6-methoxy-2-(4-methoxyphenyl)-4-benzopyrone
6-methoxyacacetin
5,7-dihydroxy-6-methoxy-2-(4-methoxyphenyl)chromen-4-one
NSC-106403
UNII-4U3UZ1K35N
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Pectolinarigenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9440 94.40%
Caco-2 + 0.8266 82.66%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.6642 66.42%
OATP2B1 inhibitior - 0.7050 70.50%
OATP1B1 inhibitior + 0.8950 89.50%
OATP1B3 inhibitior + 0.9261 92.61%
MATE1 inhibitior + 0.5400 54.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.6799 67.99%
P-glycoprotein inhibitior + 0.7559 75.59%
P-glycoprotein substrate - 0.9388 93.88%
CYP3A4 substrate + 0.5402 54.02%
CYP2C9 substrate - 0.6401 64.01%
CYP2D6 substrate - 0.8296 82.96%
CYP3A4 inhibition + 0.7817 78.17%
CYP2C9 inhibition + 0.6258 62.58%
CYP2C19 inhibition + 0.8187 81.87%
CYP2D6 inhibition - 0.6249 62.49%
CYP1A2 inhibition + 0.8668 86.68%
CYP2C8 inhibition + 0.5920 59.20%
CYP inhibitory promiscuity + 0.8459 84.59%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6581 65.81%
Eye corrosion - 0.9779 97.79%
Eye irritation - 0.5000 50.00%
Skin irritation - 0.6522 65.22%
Skin corrosion - 0.9396 93.96%
Ames mutagenesis - 0.6900 69.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5465 54.65%
Micronuclear + 0.9200 92.00%
Hepatotoxicity - 0.6250 62.50%
skin sensitisation - 0.9222 92.22%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.6750 67.50%
Nephrotoxicity - 0.8811 88.11%
Acute Oral Toxicity (c) III 0.5920 59.20%
Estrogen receptor binding + 0.9555 95.55%
Androgen receptor binding + 0.9117 91.17%
Thyroid receptor binding + 0.7259 72.59%
Glucocorticoid receptor binding + 0.8935 89.35%
Aromatase binding + 0.8417 84.17%
PPAR gamma + 0.8275 82.75%
Honey bee toxicity - 0.8843 88.43%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.8636 86.36%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL236 P41143 Delta opioid receptor 8400 nM
Ki
PMID: 26035635
CHEMBL2392 P06746 DNA polymerase beta 22387.2 nM
Potency
via CMAUP
CHEMBL1293224 P10636 Microtubule-associated protein tau 11220.2 nM
Potency
via CMAUP
CHEMBL1293277 O15118 Niemann-Pick C1 protein 3162.3 nM
Potency
via CMAUP
CHEMBL1293294 P51151 Ras-related protein Rab-9A 3548.1 nM
Potency
via CMAUP
CHEMBL1936 P10721 Stem cell growth factor receptor 600 nM
600 nM
1500 nM
IC50
IC50
IC50
PMID: 26807861
via Super-PRED
PMID: 26807861

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.33% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 97.44% 94.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.06% 85.14%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 96.62% 99.15%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.67% 95.56%
CHEMBL2581 P07339 Cathepsin D 91.26% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.54% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.47% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.38% 94.45%
CHEMBL1907 P15144 Aminopeptidase N 86.31% 93.31%
CHEMBL3192 Q9BY41 Histone deacetylase 8 86.23% 93.99%
CHEMBL3194 P02766 Transthyretin 85.92% 90.71%
CHEMBL4208 P20618 Proteasome component C5 84.86% 90.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.40% 86.92%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 82.36% 83.57%
CHEMBL3401 O75469 Pregnane X receptor 81.50% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Achillea collina
Achillea millefolium
Achillea spinulifolia
Aeonium spathulatum
Ageratina calophylla
Alluaudia ascendens
Alnus glutinosa
Alnus japonica
Aloysia citrodora
Annona rensoniana
Anthemis auriculata
Archidendron clypearia
Aristeguietia salvia
Aristolochia maxima
Arnica chamissonis
Arnica longifolia
Arnica montana
Artemisia capillaris
Artemisia judaica
Artemisia mongolica
Artemisia obtusiloba var. glabra
Artemisia xerophytica
Asanthus solidaginifolius
Baccharis conferta
Baccharis macraei
Baccharis trinervis
Baccharis vaccinoides
Barleria acanthoides
Bergenia purpurascens
Betula pendula subsp. mandshurica
Bischofia javanica
Bishopanthus soliceps
Brassica nigra
Brickellia dentata
Buddleja macrostachya
Caragana tibetica
Cassinia uncata
Centaurea aspera
Centaurea collina
Centaurea sulphurea
Chromolaena odorata
Cirsium arvense
Cirsium japonicum
Cirsium oleraceum
Cirsium setidens
Clerodendrum indicum
Cordia elaeagnoides
Crataegus sinaica
Decachaeta ovatifolia
Digitalis grandiflora
Discaria chacaye
Dodonaea viscosa
Duranta erecta
Echinocereus berlandieri
Eriodictyon sessilifolium
Euonymus nanus
Eupatorium cannabinum
Euphorbia ferganensis
Gardenia jasminoides
Gmelina arborea
Grindelia hirsutula
Helianthus grosseserratus
Heterotheca subaxillaris
Hexalobus crispiflorus
Hymenoxys jamesii
Iphiona grantioides
Isodon leucophyllus
Isodon rubescens
Isodon weisiensis
Jasminum officinale
Jatropha multifida
Jungia polita
Lasiocephalus ovatus
Layia hieracioides
Leucosceptrum canum
Ligularia platyglossa
Linaria vulgaris
Macrotyloma axillare
Malus asiatica
Marrubium cylleneum
Marrubium globosum
Meehania fargesii
Melicope lunu-ankenda
Mentha pulegium
Mikania obtusata
Millingtonia hortensis
Montrouziera sphaeroidea
Nepeta tenuifolia
Nothofagus dombeyi
Onopordum corymbosum
Onopordum nervosum
Paulownia tomentosa
Physostigma venenosum
Picrasma quassioides
Pimpinella saxifraga
Plagius grandis
Polygala myrtifolia
Polystichum deltodon
Purshia mexicana
Pyrus pyrifolia
Rhodiola stephani
Rostrinucula dependens
Salvia hypoleuca
Salvia limbata
Salvia plebeia
Sarcomelicope argyrophylla
Saussurea elegans
Schkuhria pinnata
Schkuhria schkuhrioides
Scrophularia wattii
Seriphidium vachanicum
Solanum bahamense
Striga passargei
Tanacetum aucherianum
Tanacetum densum
Teucrium chamaedrys
Tinospora smilacina
Trifolium pratense
Trigonostemon reidioides
Trollius chinensis
Tropaeolum speciosum
Tsuga heterophylla
Uncaria sessilifructus
Vatica diospyroides
Veratrum dahuricum
Veronica cupressoides
Volkameria inermis
Xerochrysum viscosum

Cross-Links

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PubChem 5320438
NPASS NPC156222
ChEMBL CHEMBL78010
LOTUS LTS0185768
wikiData Q15425293