cis-Chlorogenic acid

Details

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Internal ID cdab8344-1bdc-49f5-8010-e961a49eb0db
Taxonomy Organic oxygen compounds > Organooxygen compounds > Alcohols and polyols > Cyclitols and derivatives > Quinic acids and derivatives
IUPAC Name (1S,3R,4R,5R)-3-[(Z)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy-1,4,5-trihydroxycyclohexane-1-carboxylic acid
SMILES (Canonical) C1C(C(C(CC1(C(=O)O)O)OC(=O)C=CC2=CC(=C(C=C2)O)O)O)O
SMILES (Isomeric) C1[C@H]([C@H]([C@@H](C[C@@]1(C(=O)O)O)OC(=O)/C=C\C2=CC(=C(C=C2)O)O)O)O
InChI InChI=1S/C16H18O9/c17-9-3-1-8(5-10(9)18)2-4-13(20)25-12-7-16(24,15(22)23)6-11(19)14(12)21/h1-5,11-12,14,17-19,21,24H,6-7H2,(H,22,23)/b4-2-/t11-,12-,14-,16+/m1/s1
InChI Key CWVRJTMFETXNAD-XYXZIBEBSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C16H18O9
Molecular Weight 354.31 g/mol
Exact Mass 354.09508215 g/mol
Topological Polar Surface Area (TPSA) 165.00 Ų
XlogP -0.40
Atomic LogP (AlogP) -0.65
H-Bond Acceptor 8
H-Bond Donor 6
Rotatable Bonds 4

Synonyms

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Chlorogenic acid, (Z)-
UNII-037SV4IVWA
037SV4IVWA
Cis-5-Caffeoylquinic acid
15016-60-1
Cyclohexanecarboxylic acid, 3-(((2Z)-3-(3,4-dihydroxyphenyl)-1-oxo-2-propen-1-yl)oxy)-1,4,5-trihydroxy-, (1S,3R,4R,5R)-
(1S,3R,4R,5R)-3-{[(2Z)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}-1,4,5-trihydroxycyclohexanecarboxylic acid
NSC70861
NSC407296
Cyclohexanecarboxylic acid,4-dihydroxyphenyl)-1-oxo-2-propenyl]oxy]-1,4,5-trihydroxy-, [1S-(1.alpha.,3.beta.,4.alpha.,5.alpha.)]-
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of cis-Chlorogenic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8565 85.65%
Caco-2 - 0.9230 92.30%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.6770 67.70%
OATP2B1 inhibitior - 0.5784 57.84%
OATP1B1 inhibitior + 0.9640 96.40%
OATP1B3 inhibitior + 0.9473 94.73%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.8588 85.88%
BSEP inhibitior - 0.7020 70.20%
P-glycoprotein inhibitior - 0.9329 93.29%
P-glycoprotein substrate - 0.8340 83.40%
CYP3A4 substrate + 0.5526 55.26%
CYP2C9 substrate + 0.6014 60.14%
CYP2D6 substrate - 0.8568 85.68%
CYP3A4 inhibition - 0.8744 87.44%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9069 90.69%
CYP2D6 inhibition - 0.9388 93.88%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition + 0.4526 45.26%
CYP inhibitory promiscuity - 0.9686 96.86%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9064 90.64%
Carcinogenicity (trinary) Non-required 0.6128 61.28%
Eye corrosion - 0.9899 98.99%
Eye irritation - 0.8986 89.86%
Skin irritation - 0.6297 62.97%
Skin corrosion - 0.8862 88.62%
Ames mutagenesis - 0.9000 90.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5420 54.20%
Micronuclear + 0.6100 61.00%
Hepatotoxicity + 0.8750 87.50%
skin sensitisation - 0.5785 57.85%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.8806 88.06%
Acute Oral Toxicity (c) III 0.7775 77.75%
Estrogen receptor binding + 0.7776 77.76%
Androgen receptor binding + 0.6557 65.57%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.7362 73.62%
Aromatase binding + 0.6016 60.16%
PPAR gamma + 0.5828 58.28%
Honey bee toxicity - 0.8348 83.48%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6155 61.55%
Fish aquatic toxicity + 0.9844 98.44%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1900 P15121 Aldose reductase 300 nM
IC50
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.68% 91.11%
CHEMBL3194 P02766 Transthyretin 92.33% 90.71%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.21% 95.56%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 91.84% 94.62%
CHEMBL1951 P21397 Monoamine oxidase A 91.80% 91.49%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.73% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.16% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.14% 94.45%
CHEMBL221 P23219 Cyclooxygenase-1 90.83% 90.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.63% 89.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 90.33% 96.00%
CHEMBL245 P20309 Muscarinic acetylcholine receptor M3 90.18% 97.53%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 89.66% 94.08%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 88.14% 94.23%
CHEMBL2179 P04062 Beta-glucocerebrosidase 87.78% 85.31%
CHEMBL4208 P20618 Proteasome component C5 87.47% 90.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 85.05% 99.15%
CHEMBL211 P08172 Muscarinic acetylcholine receptor M2 84.95% 94.97%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.72% 95.50%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.57% 97.09%
CHEMBL340 P08684 Cytochrome P450 3A4 81.18% 91.19%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Abutilon theophrasti
Akebia quinata
Akebia trifoliata
Aloe africana
Aloe ferox
Aloe spicata
Aloe vera
Andrographis paniculata
Angelica acutiloba
Angelica gigas
Angelica pubescens
Angelica sinensis
Apocynum venetum
Aralia continentalis
Arctium lappa
Ardisia japonica
Artemisia annua
Artemisia argyi
Artemisia capillaris
Artemisia carvifolia
Artemisia gmelinii
Artemisia montana
Artemisia princeps
Centella asiatica
Centipeda minima
Chaenomeles sinensis
Chaenomeles speciosa
Chrysanthemum indicum
Cichorium intybus
Cichorium pumilum
Conioselinum anthriscoides
Coptis chinensis
Coptis deltoidea
Coptis japonica
Coptis teeta
Crataegus pinnatifida
Cuscuta australis
Cuscuta chinensis
Dipsacus inermis
Eclipta prostrata
Eleutherococcus senticosus
Epimedium brevicornu
Epimedium grandiflorum
Epimedium koreanum
Epimedium pubescens
Epimedium sagittatum
Epimedium sempervirens
Epimedium wushanense
Equisetum hyemale
Erigeron breviscapus
Eriobotrya japonica
Erycibe obtusifolia
Erycibe schmidtii
Eucommia ulmoides
Eupatorium lindleyanum
Euphorbia hirta
Foeniculum vulgare
Forsythia suspensa
Forsythia viridissima
Fraxinus chinensis
Fraxinus chinensis subsp. chinensis
Fraxinus stylosa
Gardenia jasminoides
Ginkgo biloba
Glechoma grandis
Glechoma longituba
Grona styracifolia
Houttuynia cordata
Humulus lupulus
Hypericum perforatum
Inula helenium
Inula japonica
Isatis tinctoria
Isodon rubescens
Kalopanax septemlobus
Ligusticum officinale
Lilium brownii
Lilium lancifolium
Lilium pumilum
Lonicera confusa
Lonicera hypoglauca
Lonicera japonica
Lonicera macrantha
Lycium barbarum
Lycium chinense
Lysimachia christinae
Melia azedarach
Morus alba
Morus indica
Murraya exotica
Murraya paniculata
Nelumbo nucifera
Pentanema britannicum
Perilla frutescens
Persicaria bistorta
Persicaria tinctoria
Phellodendron amurense
Phellodendron chinense
Phlomoides rotata
Pogostemon cablin
Prunella vulgaris
Prunus mume
Punica granatum
Pyrrosia hastata
Pyrrosia lingua
Pyrrosia petiolosa
Reynoutria japonica
Reynoutria multiflora
Rhododendron dauricum
Rosa chinensis
Rosa rugosa
Rubus chingii
Rubus coreanus
Salvia miltiorrhiza
Sarcandra glabra
Sargentodoxa cuneata
Saussurea involucrata
Schisandra chinensis
Scopolia carniolica
Scopolia japonica
Scutellaria baicalensis
Scutellaria barbata
Senecio scandens
Smilax china
Solanum nigrum
Solidago decurrens
Taraxacum coreanum
Taraxacum mongolicum
Taraxacum officinale
Taraxacum platycarpum
Taraxacum sinicum
Thymus quinquecostatus
Thymus vulgaris
Toxicodendron vernicifluum
Tussilago farfara
Uncaria macrophylla
Uncaria rhynchophylla
Uncaria sinensis
Vitex negundo
Xanthium strumarium
Xanthium strumarium subsp. strumarium
Ziziphus jujuba

Cross-Links

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PubChem 1794425
NPASS NPC167976