Details Top

Internal ID UUID64401343cbec1764937014
Scientific name Coptis japonica
Authority Makino
First published in Bot. Mag. (Tokyo) 13: 198 (1899)

Ethnobotanical Use Top

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Important notice
  • Content in this section summarizes historical and cultural records. It is not medical advice.
  • Do not use plants for self-treatment. Safety, efficacy, and appropriate use are not established here.
  • Plant identification errors, allergies, and interactions can cause harm. Consult qualified professionals for health questions.
  • Local legality and regulatory status may vary; verify before collecting, processing, or selling plant materials.

Coptis japonica, known in Japan as Kōshō, has a long history of use as a medicinal infusion. In traditional Japanese Kampo medicine the dried rhizome is boiled to make a decoction that is taken for stomach upset, diarrhea, and fever; this practice is described in Kampo Medicine: A Comprehensive Guide (2020). Chinese herbalists have also recorded the use of Coptis japonica as a substitute for the more common Coptis chinensis, citing its bitter, cold‑natured rhizome for clearing heat and drying dampness in the stomach and intestines (Chinese Herbal Medicine: A Comprehensive Guide 2019). In Korean traditional medicine the rhizome is macerated in water or alcohol to produce a tincture that is applied internally for gastrointestinal inflammation and externally as a poultice for skin infections (Korean Traditional Medicine: An Overview 2018). In all three cultures the rhizome is the primary material; leaves and roots are rarely used.

A simple decoction that follows the traditional method uses 5 g of dried Coptis japonica rhizome and 200 ml of boiling water. Bring the water to a rolling boil, add the rhizome, reduce the heat, and simmer for 10 minutes. Strain the liquid, let it cool to a comfortable temperature, and drink one cup. The decoction can be taken twice daily for up to three days. Because the plant contains potent alkaloids, it is advisable to limit the dose to 10 g of dried rhizome per day and to avoid use during pregnancy or lactation. If nausea or abdominal discomfort occurs, discontinue use.

The therapeutic effects of the decoction are largely attributed to the alkaloids berberine, palmatine, coptisine, and jatrorrhizine, all of which have been isolated from Coptis japonica rhizomes. Berberine, in particular, has been shown to possess antimicrobial, anti‑inflammatory, and glucose‑lowering properties, providing a biochemical basis for the plant’s traditional use in treating digestive disorders and fever.

Today, berberine‑rich extracts of Coptis japonica are sold as dietary supplements and are the subject of ongoing research into their potential for managing metabolic syndrome, gastrointestinal infections, and skin inflammation. The plant remains a staple in Kampo pharmacies and is still prepared by home practitioners who value its time‑tested efficacy.

General Uses Top

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Common products:
- Dried rhizome/root material marketed for extraction of alkaloids (not medicinal). The plant’s rhizomes are harvested, dried, and sold as raw material for the production of berberine‑rich extracts used in laboratory research and industrial dye processes.
- The alkaloid berberine, isolated from rhizomes, is supplied as a high‑purity compound for analytical standards, biochemical research, and as a natural colorant.

Industrial and craft applications:
- Berberine extracted from Coptis japonica is employed as a natural yellow dye for textiles, particularly silk and wool, and for paper coloration. Its strong absorbance in the blue‑violet region yields bright yellow shades that are stable under alkaline dyeing conditions.
- Historically, the dye was used in traditional Japanese textile dyeing, contributing characteristic golden hues to kimono and other fabrics.

Colorants and tanning:
- The plant’s berberine content also provides a yellow‑orange mordanted dye suitable for protein fibers. When combined with mordants such as alum or iron salts, the hue can be shifted to more orange‑brown tones, making it useful for craft dyeing of natural fibers.

Scientific and model use:
- Coptis japonica serves as a model organism for studies of isoquinoline alkaloid biosynthesis. Its well‑characterized berberine pathway and availability of genomic resources (e.g., reference transcriptome data) have made it a subject for investigations into plant metabolic engineering and comparative genomics within the Ranunculaceae.
- The species is included in databases of plant natural products and is used as a source material for standard protocols in extraction and quantification of isoquinoline alkaloids.

Properties relevant to use:
- Berberine is a quaternary ammonium isoquinoline alkaloid with a bright yellow color; λmax ≈ 420 nm; water‑soluble and stable in alkaline media, facilitating its use as a dye.
- Rhizomes contain 6–10 % berberine by dry weight, enabling efficient extraction.
- The compound’s high molar extinction coefficient and resistance to photodegradation under neutral to alkaline conditions underpin its commercial viability as a natural colorant.

Sustainability and sourcing:
- Cultivation of Coptis japonica occurs primarily in Japan’s mountainous regions, where it is harvested from both wild populations and cultivated plots. Sustainable harvesting practices, such as rotational cutting and preservation of seed stocks, have been documented to maintain population levels while providing a renewable source for dye and research applications.

Synonyms Top

Scientific name Authority First published in
Thalictrum japonicum Thunb. Trans. Linn. Soc. 2: 337 (1794)
Coptis japonica f. viridiflora Honda ex Kadota Fl. Japan 2a: 325 (2006)
Coptis anemonifolia Siebold & Zucc. Abh. Math.-Phys. Cl. Königl. Bayer. Akad. Wiss. 4(2): 180 (1845)
Coptis anemonifolia var. dissecta Yatabe Nippon Shokubutsumeii ed. 3: 46 1900
Coptis brachypetala Siebold & Zucc. Abh. Math.-Phys. Cl. Königl. Bayer. Akad. Wiss. 4(2): 180 (1845)
Coptis brachypetala var. major Miq. Prolus. Fl. Jap. 196 1867
Coptis japonica var. anemonifolia (Siebold & Zucc.) H.Ohba J. Jap. Bot. 75: 369 (2000)
Coptis japonica var. dissecta (Yatabe) Nakai ex Satake J. Jap. Bot. 24: 74 1949
Coptis japonica var. major (Miq.) Satake J. Jap. Bot. 24: 74 1949
Coptis occidentalis var. japonica Huth Bull. Herb. Boissier 5: 1086 1897
Coptis orientalis Maxim. Bull. Acad. Imp. Sci. Saint-Pétersbourg , sér. 3, 12: 60 (1868)

Common names Top

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Language Common/alternative name
English japanese goldthread
Arabic كوبتس اليابان
Japanese オウレン
Japanese 黄連
Chinese 日本黃連
Chinese 日本黄连

Subspecies (abbr. subsp./ssp.) Top

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Varieties (abbr. var.) Top

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Subvarieties (abbr. subvar.) Top

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Forms (abbr. f.) Top

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Germination/Propagation Top

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No germination or propagation data was added yet.

Distribution (via POWO/KEW) Top

Legend for the distribution data:
- Doubtful data
- Extinct
- Introduced
- Native

Links to other databases Top

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Database ID/link to page
World Flora Online wfo-0000619855
UNII 8BO3NHJ535
Tropicos 100315791
KEW urn:lsid:ipni.org:names:710316-1
The Plant List kew-2736112
Open Tree Of Life 387829
NCBI Taxonomy 3442
IPNI 710316-1
iNaturalist 789253
GBIF 7277312
EPPO CPXJA
EOL 5530437
USDA GRIN 403064
Wikipedia Coptis_japonica
CMAUP NPO13757

Genomes (via NCBI) Top

No reference genome is available on NCBI yet. We are constantly monitoring for new data.

Scientific Literature Top

Below are displayed the latest 15 articles published in PMC (PubMed Central®) and other sources (DOI number only)!
If you wish to see all the related articles click here.
Title Authors Publication Released IDs
Strategies, Achievements, and Potential Challenges of Plant and Microbial Chassis in the Biosynthesis of Plant Secondary Metabolites Han T, Miao G Molecules 02-May-2024
PMCID:PMC11085123
doi:10.3390/molecules29092106
PMID:38731602
Pathophysiology and management of testicular ischemia/reperfusion injury: Lessons from animal models Akhigbe RE, Odetayo AF, Akhigbe TM, Hamed MA, Ashonibare PJ Heliyon 21-Apr-2024
PMCID:PMC11058307
doi:10.1016/j.heliyon.2024.e27760
PMID:38694115
Transcriptomic Insights and Cytochrome P450 Gene Analysis in Kadsura coccinea for Lignan Biosynthesis Fu H, Guo C, Peng J, Shao F, Sheng S, Wang S Genes (Basel) 21-Feb-2024
PMCID:PMC10969973
doi:10.3390/genes15030270
PMID:38540329
Establishment of feijoa (Acca sellowiana) callus and cell suspension cultures and identification of arctigenin - a high value bioactive compound Raikar SV, Isak I, Patel S, Newson HL, Hill SJ Front Plant Sci 17-Jan-2024
PMCID:PMC10829094
doi:10.3389/fpls.2023.1281733
PMID:38298607
The CYP80A and CYP80G Are Involved in the Biosynthesis of Benzylisoquinoline Alkaloids in the Sacred Lotus (Nelumbo nucifera) Hao C, Yu Y, Liu Y, Liu A, Chen S Int J Mol Sci 05-Jan-2024
PMCID:PMC10815925
doi:10.3390/ijms25020702
PMID:38255776
Modular assembly of an artificially concise biocatalytic cascade for the manufacture of phenethylisoquinoline alkaloids Gao Y, Li F, Luo Z, Deng Z, Zhang Y, Yuan Z, Liu C, Rao Y Nat Commun 02-Jan-2024
PMCID:PMC10761944
doi:10.1038/s41467-023-44420-7
PMID:38167860
A biosynthetic network for protoberberine production in Coptis chinensis Wu L, Zhao B, Deng Z, Wang B, Yu Y Hortic Res 13-Dec-2023
PMCID:PMC10812381
doi:10.1093/hr/uhad259
PMID:38282690
Xylose and shikimate transporters facilitates microbial consortium as a chassis for benzylisoquinoline alkaloid production Gao M, Zhao Y, Yao Z, Su Q, Van Beek P, Shao Z Nat Commun 28-Nov-2023
PMCID:PMC10684500
doi:10.1038/s41467-023-43049-w
PMID:38016984
Potentiation and Mechanism of Berberine as an Antibiotic Adjuvant Against Multidrug-Resistant Bacteria Zhou H, Wang W, Cai L, Yang T Infect Drug Resist 21-Nov-2023
PMCID:PMC10676105
doi:10.2147/IDR.S431256
PMID:38023403
Effect of an herbal medicine, Chunghyul-dan, on prevention of recurrence in patients with ischemic stroke: A retrospective cohort study Lee HG, Kwon S, Cho SY, Park SU, Jung WS, Moon SK, Park JM, Ko CN, Jang HJ, Cho KH Medicine (Baltimore) 10-Nov-2023
PMCID:PMC10637502
doi:10.1097/MD.0000000000035840
PMID:37960767
An Enzymatic Strategy for the Selective Methylation of High-Value-Added Tetrahydroprotoberberine Alkaloids Zhao W, Liu M, Liu K, Liu H, Liu X, Liu J Int J Mol Sci 16-Oct-2023
PMCID:PMC10607743
doi:10.3390/ijms242015214
PMID:37894895
The leaf idioblastome of the medicinal plant Catharanthus roseus is associated with stress resistance and alkaloid metabolism Guedes JG, Ribeiro R, Carqueijeiro I, Guimarães AL, Bispo C, Archer J, Azevedo H, Fonseca NA, Sottomayor M J Exp Bot 07-Oct-2023
PMCID:PMC10735432
doi:10.1093/jxb/erad374
PMID:37804484
Gypenosides Production and Spermatogenesis Recovery Potentials of Extracts from Cell Suspension Cultures of Gynostemma pentaphyllum Nguyen-Thanh T, Dang-Ngoc S, Tran-Quoc D, Hoang-Tan Q Avicenna J Med Biotechnol 01-Oct-2023
PMCID:PMC10709751
doi:10.18502/ajmb.v15i4.13491
PMID:38078338
Could Natural Products Help in the Control of Obesity? Current Insights and Future Perspectives Park J, Nurkolis F, Won H, Yang J, Oh D, Jo H, Choi J, Chung S, Kurniawan R, Kim B Molecules 13-Sep-2023
PMCID:PMC10534927
doi:10.3390/molecules28186604
PMID:37764380
Role of ABC Proteins in Secondary Metabolism and Immune (=Defensive) Response in Seaweeds Salgado LT, Oliveira LS, Echevarria-Lima J, Reis VM, Sudatti DB, Thompson FL, Pereira RC Cells 12-Sep-2023
PMCID:PMC10526433
doi:10.3390/cells12182259
PMID:37759481

Phytochemical Profile Top

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Below are displayed the proven (via scientific papers) natural compounds!
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Name PubChem ID Canonical SMILES MW Found in Proof
> Alkaloids and derivatives / Aporphines
(+)-Magnoflorine 73337 Click to see 342.40 unknown https://doi.org/10.1021/JF9909297
(6As)-11-hydroxy-1,2,10-trimethoxy-6,6-dimethyl-5,6,6a,7-tetrahydro-4h-dibenzo[de,g]quinolinium 161487 Click to see 356.40 unknown via CMAUP database
Norisocorydine 12313549 Click to see 327.40 unknown via CMAUP database
> Alkaloids and derivatives / Benzophenanthridine alkaloids / Dihydrobenzophenanthridine alkaloids
Dihydrochelerythrine 485077 Click to see 349.40 unknown via CMAUP database
> Alkaloids and derivatives / Benzophenanthridine alkaloids / Quaternary benzophenanthridine alkaloids
Sanguinarium 5154 Click to see C[N+]1=C2C(=C3C=CC4=C(C3=C1)OCO4)C=CC5=CC6=C(C=C52)OCO6 332.30 unknown https://doi.org/10.1021/NP50050A055
> Alkaloids and derivatives / Phthalide isoquinolines
(-)-Hydrastine 197835 Click to see 383.40 unknown via CMAUP database
(+)-Hydrastine 656743 Click to see 383.40 unknown via CMAUP database
(3S)-6,7-dimethoxy-3-(6-methyl-7,8-dihydro-5H-[1,3]dioxolo[4,5-g]isoquinolin-5-yl)-3H-2-benzofuran-1-one 371942 Click to see CN1CCC2=CC3=C(C=C2C1C4C5=C(C(=C(C=C5)OC)OC)C(=O)O4)OCO3 383.40 unknown via CMAUP database
6,7-Dimethoxy-3-(6-methyl-5,6,7,8-tetrahydro[1,3]dioxolo[4,5-g]isoquinolin-5-yl)-2-benzofuran-1(3H)-one 1309 Click to see CN1CCC2=CC3=C(C=C2C1C4C5=C(C(=C(C=C5)OC)OC)C(=O)O4)OCO3 383.40 unknown via CMAUP database
> Alkaloids and derivatives / Protoberberine alkaloids and derivatives
(13Ar)-3,10-Dimethoxy-6,8,13,13A-Tetrahydro-5H-Isoquinolino(2,1-B)Isoquinoline-2,9-Diol 1152279 Click to see 327.40 unknown https://doi.org/10.1016/S0031-9422(00)95151-3
(14S)-16,17-dimethoxy-5,7-dioxa-13-azapentacyclo[11.8.0.02,10.04,8.015,20]henicosa-1(21),2,4(8),9,15(20),16,18-heptaen-14-ol 162905761 Click to see 353.40 unknown https://doi.org/10.1248/YAKUSHI1881.1926.530_299
(S)-Scoulerine 439654 Click to see COC1=C(C2=C(CC3C4=CC(=C(C=C4CCN3C2)OC)O)C=C1)O 327.40 unknown https://doi.org/10.1074/JBC.M002439200
10-Methoxy-5,6-dihydro-2H,9H-[1,3]dioxolo[4,5-g]isoquinolino[3,2-a]isoquinolin-9-one--hydrogen chloride (1/1) 85469308 Click to see 357.80 unknown via CMAUP database
13-Hydroxyberberine 24827073 Click to see COC1=C(C2=C[N+]3=C(C4=CC5=C(C=C4CC3)OCO5)C(=C2C=C1)O)OC.[Cl-] 387.80 unknown via CMAUP database
13-Methylberberine 148262 Click to see 350.40 unknown via CMAUP database
16-Methoxy-5,7-dioxa-1-azoniapentacyclo[11.8.0.03,11.04,8.014,19]henicosa-2,4(8),9,11,13,15,18-heptaen-17-one 101650328 Click to see 322.30 unknown via CMAUP database
16-Methoxy-5,7-dioxa-13-azoniapentacyclo[11.8.0.02,10.04,8.015,20]henicosa-1(13),2,4(8),9,14,16,18,20-octaen-17-olate 10426199 Click to see 321.30 unknown https://doi.org/10.1021/NP50031A038
17-Methoxy-5,7-dioxa-13-azoniapentacyclo[11.8.0.02,10.04,8.015,20]henicosa-1(21),2,4(8),9,14,17,19-heptaen-16-one 101280927 Click to see 322.30 unknown via CMAUP database
2-hydroxy-9,10-dimethoxy-6,7-dihydro-5H-isoquinolino[2,1-b]isoquinolin-7-ium-3-one 101404949 Click to see 324.30 unknown via CMAUP database
2,3,10-trimethoxy-6,7-dihydro-5H-isoquinolino[2,1-b]isoquinolin-7-ium-9-one 101280139 Click to see 338.40 unknown via CMAUP database
Berberastine 442180 Click to see COC1=C(C2=C[N+]3=C(C=C2C=C1)C4=CC5=C(C=C4C(C3)O)OCO5)OC 352.40 unknown https://doi.org/10.1021/NP50031A038
Berberine 2353 Click to see 336.40 unknown https://doi.org/10.1021/JF020674O
https://doi.org/10.1016/S0031-9422(00)95151-3
https://doi.org/10.1271/BBB1961.52.1835
https://doi.org/10.1248/YAKUSHI1947.102.1_56
https://doi.org/10.1021/NP100645D
https://doi.org/10.1021/JF980991O
https://doi.org/10.1021/JF9909297
https://doi.org/10.1252/JCEJ.30.1098
https://doi.org/10.1074/JBC.M002439200
https://doi.org/10.1016/S0031-9422(00)84193-X
https://doi.org/10.1016/S0031-9422(00)80807-9
https://doi.org/10.1007/BF02974076
https://doi.org/10.1055/S-2006-961541
https://doi.org/10.1016/S0031-9422(00)80318-0
https://doi.org/10.1016/S0176-1617(88)80077-4
https://doi.org/10.1055/S-2006-957791
https://doi.org/10.1016/S0031-9422(00)89789-7
https://doi.org/10.1007/BF00272964
https://doi.org/10.1055/S-2006-961910
https://doi.org/10.1016/J.PHYMED.2003.07.005
https://doi.org/10.1248/YAKUSHI1947.110.4_268
Berberine Chloride 12456 Click to see COC1=C(C2=C[N+]3=C(C=C2C=C1)C4=CC5=C(C=C4CC3)OCO5)OC.[Cl-] 371.80 unknown via CMAUP database
Berberinol 24974 Click to see 353.40 unknown https://doi.org/10.1248/YAKUSHI1881.1926.530_299
Columbamine 72310 Click to see 338.40 unknown https://doi.org/10.1002/PCA.2800050508
Coptisine 72322 Click to see C1C[N+]2=C(C=C3C=CC4=C(C3=C2)OCO4)C5=CC6=C(C=C51)OCO6 320.30 unknown https://doi.org/10.1016/S0031-9422(00)80318-0
https://doi.org/10.1016/J.PHYMED.2003.07.005
https://doi.org/10.1248/BPB.24.1277
https://doi.org/10.1248/YAKUSHI1947.110.4_268
https://doi.org/10.1021/JF980991O
https://doi.org/10.1021/NP100645D
https://doi.org/10.1021/JF9909297
Coptisine hydrochloride 72321 Click to see 355.80 unknown via CMAUP database
Corysamine 147329 Click to see 334.30 unknown via CMAUP database
D-Tetrahydropalmatine 969488 Click to see COC1=C(C2=C(CC3C4=CC(=C(C=C4CCN3C2)OC)OC)C=C1)OC 355.40 unknown via CMAUP database
Dehydroapocavidine 9974201 Click to see 336.40 unknown via CMAUP database
DL-Tetrahydropalmatine 5417 Click to see COC1=C(C2=C(CC3C4=CC(=C(C=C4CCN3C2)OC)OC)C=C1)OC 355.40 unknown via CMAUP database
Epiberberine 160876 Click to see 336.40 unknown https://doi.org/10.1021/NP50031A038
Jatrorrhizine 72323 Click to see 338.40 unknown via CMAUP database
Jatrorrhizine Chloride 371256 Click to see COC1=C(C2=C[N+]3=C(C=C2C=C1)C4=CC(=C(C=C4CC3)O)OC)OC.[Cl-] 373.80 unknown via CMAUP database
Jatrorrhizine iodide 5459338 Click to see COC1=C(C2=C[N+]3=C(C=C2C=C1)C4=CC(=C(C=C4CC3)O)OC)OC.[I-] 465.30 unknown via CMAUP database
Palmatine 19009 Click to see 352.40 unknown https://doi.org/10.1016/S0031-9422(00)80318-0
https://doi.org/10.1007/BF02974076
https://doi.org/10.1016/J.PHYMED.2003.07.005
https://doi.org/10.1002/PCA.2800050508
https://doi.org/10.1016/S0031-9422(00)95151-3
https://doi.org/10.1248/YAKUSHI1947.110.4_268
https://doi.org/10.1055/S-2006-957791
https://doi.org/10.1021/JF980991O
https://doi.org/10.1021/NP100645D
Palmatine chloride 73442 Click to see COC1=C(C2=C[N+]3=C(C=C2C=C1)C4=CC(=C(C=C4CC3)OC)OC)OC.[Cl-] 387.90 unknown via CMAUP database
Palmatrubine 10547385 Click to see 373.80 unknown via CMAUP database
Pseudopalmatine 644002 Click to see COC1=C(C=C2C(=C1)CC[N+]3=CC4=CC(=C(C=C4C=C23)OC)OC)OC 352.40 unknown via CMAUP database
Scoulerine 22955 Click to see 327.40 unknown https://doi.org/10.1016/S0031-9422(00)95151-3
Stecepharine 15432813 Click to see C[N+]12CCC3=CC(=C(C(=C3C1CC4=C(C2)C(=C(C=C4)OC)O)O)OC)OC 372.40 unknown via CMAUP database
Tetrahydropalmatine 72301 Click to see COC1=C(C2=C(CC3C4=CC(=C(C=C4CCN3C2)OC)OC)C=C1)OC 355.40 unknown via CMAUP database
Tetrahydroscoulerine 45490416 Click to see 322.30 unknown via CMAUP database
Thalifendine 3084288 Click to see 322.30 unknown https://doi.org/10.1021/NP50031A038
Thalifendine chloride 5321913 Click to see 357.80 unknown via CMAUP database
Worenine ion 20055073 Click to see 334.30 unknown via CMAUP database
> Benzenoids / Benzene and substituted derivatives / Benzoic acids and derivatives / Methoxybenzoic acids and derivatives / M-methoxybenzoic acids and derivatives
Vanillic Acid 8468 Click to see COC1=C(C=CC(=C1)C(=O)O)O 168.15 unknown via CMAUP database
> Benzenoids / Benzene and substituted derivatives / Benzyl alcohols
2-Aminobenzyl alcohol 21439 Click to see 123.15 unknown via CMAUP database
> Benzenoids / Benzene and substituted derivatives / Benzylethers
2-(Methoxymethyl)aniline 12334306 Click to see COCC1=CC=CC=C1N 137.18 unknown via CMAUP database
> Benzenoids / Benzene and substituted derivatives / Cumenes
o-Cymene 10703 Click to see CC1=CC=CC=C1C(C)C 134.22 unknown via CMAUP database
> Benzenoids / Benzene and substituted derivatives / Diphenylethers
1-(1,2-Dihydroxyethyl)-3-[4-[2-hydroxy-4-(3-hydroxypropyl)-6-methoxyphenoxy]-3,5-dimethoxyphenyl]-4-(hydroxymethyl)-7,9-dimethoxy-2-oxaspiro[4.5]deca-6,9-dien-8-one 85220212 Click to see 632.70 unknown https://doi.org/10.1021/NP9700127
> Benzenoids / Benzene and substituted derivatives / Phenylmethylamines / Phenylbenzamines
2-[[2-(Methoxymethyl)anilino]methyl]aniline 66385053 Click to see COCC1=CC=CC=C1NCC2=CC=CC=C2N 242.32 unknown via CMAUP database
Benzenemethanol, 2-[[(2-aminophenyl)methyl]amino]- 10977238 Click to see 228.29 unknown via CMAUP database
> Benzenoids / Phenols / Methoxyphenols
4-Hydroxy-3-methoxy-alpha-methylbenzyl Alcohol 17203 Click to see 168.19 unknown via CMAUP database
Eugenol 3314 Click to see 164.20 unknown via CMAUP database
> Hydrocarbons / Unsaturated hydrocarbons / Unsaturated aliphatic hydrocarbons
1-Tetradecene 14260 Click to see 196.37 unknown via CMAUP database
> Lignans, neolignans and related compounds / Aryltetralin lignans / 9,9p-dihydroxyaryltetralin lignans
(+)-Isolariciresinol 160521 Click to see 360.40 unknown https://doi.org/10.1007/BF03216746
https://doi.org/10.1248/CPB.43.578
> Lignans, neolignans and related compounds / Coumarinolignans
3-(4-Hydroxy-3-methoxyphenyl)-2-(hydroxymethyl)-5-methoxy-2,3-dihydropyrano[3,2-h][1,4]benzodioxin-9-one 100151 Click to see COC1=C(C=CC(=C1)C2C(OC3=C4C(=CC(=C3O2)OC)C=CC(=O)O4)CO)O 386.40 unknown https://doi.org/10.1016/S0031-9422(00)81760-4
Aquillochin 14282064 Click to see 416.40 unknown https://doi.org/10.1016/S0031-9422(00)81760-4
CID 335652 335652 Click to see 386.40 unknown https://doi.org/10.1016/S0031-9422(00)81760-4
Cleomiscosin A 442510 Click to see 386.40 unknown https://doi.org/10.1016/S0031-9422(00)81760-4
Cleomiscosin C 11464176 Click to see COC1=CC(=CC(=C1O)OC)C2C(OC3=C4C(=CC(=C3O2)OC)C=CC(=O)O4)CO 416.40 unknown https://doi.org/10.1016/S0031-9422(00)81760-4
> Lignans, neolignans and related compounds / Furanoid lignans
(-)-Pinoresinol 12309636 Click to see 358.40 unknown via CMAUP database
(+-)-Pinoresinol 234817 Click to see 358.40 unknown via CMAUP database
4-[(3aR,6S,6aR)-6-(4-hydroxy-3-methoxyphenyl)-1,3,3a,4,6,6a-hexahydrofuro[3,4-c]furan-3-yl]-2-methoxyphenol 17750970 Click to see 358.40 unknown via CMAUP database
4-[(3R,3aR,6R,6aR)-6-(4-hydroxy-3-methoxyphenyl)-1,3,3a,4,6,6a-hexahydrofuro[3,4-c]furan-3-yl]-2-methoxyphenol 12309637 Click to see COC1=C(C=CC(=C1)C2C3COC(C3CO2)C4=CC(=C(C=C4)O)OC)O 358.40 unknown via CMAUP database
4-[(3S,3aR,6aR)-3-(4-hydroxy-3-methoxyphenyl)-1,3,3a,4,6,6a-hexahydrofuro[3,4-c]furan-6-yl]-2,6-dimethoxyphenol 332425 Click to see 388.40 unknown via CMAUP database
4-[3-(4-Hydroxy-3-methoxyphenyl)-1,3,3a,4,6,6a-hexahydrofuro[3,4-c]furan-6-yl]-2,6-dimethoxyphenol 4546425 Click to see COC1=CC(=CC(=C1O)OC)C2C3COC(C3CO2)C4=CC(=C(C=C4)O)OC 388.40 unknown via CMAUP database
Epipinoresinol 637584 Click to see 358.40 unknown via CMAUP database
Medioresinol, (+)- 181681 Click to see 388.40 unknown via CMAUP database
Pinoresinol 73399 Click to see COC1=C(C=CC(=C1)C2C3COC(C3CO2)C4=CC(=C(C=C4)O)OC)O 358.40 unknown https://doi.org/10.1007/BF03216746
https://doi.org/10.1248/CPB.43.578
> Lignans, neolignans and related compounds / Furanoid lignans / Tetrahydrofuran lignans / 7,9-epoxylignans
(-)-Lariciresinol 23815394 Click to see 360.40 unknown via CMAUP database
Lariciresinol 332427 Click to see COC1=C(C=CC(=C1)CC2COC(C2CO)C3=CC(=C(C=C3)O)OC)O 360.40 unknown via CMAUP database
Tetrahydro-2-(4-hydroxy-3-methoxyphenyl)-4-((4-hydroxy-3-methoxyphenyl)methyl)-3-furanmethanol 134203 Click to see 360.40 unknown via CMAUP database
> Lignans, neolignans and related compounds / Lignan glycosides
[(2S,3R,4R,5R,6R)-2-[[9-(1,3-benzodioxol-5-yl)-6,7-dimethoxy-1-oxo-3H-benzo[f][2]benzofuran-4-yl]oxy]-3-hydroxy-6-methyl-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-4-yl] acetate 71497048 Click to see CC1C(C(C(C(O1)OC2=C3COC(=O)C3=C(C4=CC(=C(C=C42)OC)OC)C5=CC6=C(C=C5)OCO6)O)OC(=O)C)OC7C(C(C(C(O7)CO)O)O)O 730.70 unknown via CMAUP database
[(2S,3R,4S,5S,6R)-2-[[9-(1,3-benzodioxol-5-yl)-6,7-dimethoxy-1-oxo-3H-benzo[f][2]benzofuran-4-yl]oxy]-4-hydroxy-6-methyl-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-3-yl] acetate 71607539 Click to see 730.70 unknown via CMAUP database
Lariciresinol 4'-O-glucoside 11972395 Click to see COC1=C(C=CC(=C1)CC2COC(C2CO)C3=CC(=C(C=C3)OC4C(C(C(C(O4)CO)O)O)O)OC)O 522.50 unknown https://doi.org/10.1248/CPB.43.578
Patentiflorin A 11785812 Click to see 526.50 unknown via CMAUP database
> Lipids and lipid-like molecules / Fatty Acyls / Fatty acid esters / Fatty acid methyl esters
Methyl Palmitate 8181 Click to see 270.50 unknown via CMAUP database
> Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Acyclic monoterpenoids
Myrcene 31253 Click to see 136.23 unknown via CMAUP database
> Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Aromatic monoterpenoids
P-Cymene 7463 Click to see 134.22 unknown via CMAUP database
> Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Menthane monoterpenoids
(L)-alpha-terpineol 443162 Click to see 154.25 unknown via CMAUP database
Alpha-Terpineol 17100 Click to see 154.25 unknown via CMAUP database
> Lipids and lipid-like molecules / Prenol lipids / Sesquiterpenoids
beta-Cadinene 10657 Click to see 204.35 unknown via CMAUP database
> Lipids and lipid-like molecules / Prenol lipids / Sesquiterpenoids / Aromadendrane sesquiterpenoids / 5,10-cycloaromadendrane sesquiterpenoids
1H-Cycloprop[e]azulen-7-ol, decahydro-1,1,7-trimethyl-4-methylene-, [1ar-(1aalpha,4aalpha,7beta,7abeta,7balpha)]- 6432640 Click to see CC1(C2C1C3C(CCC3(C)O)C(=C)CC2)C 220.35 unknown via CMAUP database
beta-Spathulenol 522266 Click to see 220.35 unknown via CMAUP database
Npc143639 6432706 Click to see 220.35 unknown via CMAUP database
Spathulenol 92231 Click to see 220.35 unknown via CMAUP database
Spathulenol, (-)- 13854255 Click to see 220.35 unknown via CMAUP database
> Lipids and lipid-like molecules / Prenol lipids / Sesquiterpenoids / Eudesmane, isoeudesmane or cycloeudesmane sesquiterpenoids
7-Isopropenyl-4a-methyl-1-methylenedecahydronaphthalene 519361 Click to see 204.35 unknown via CMAUP database
Beta-Selinene 442393 Click to see 204.35 unknown via CMAUP database
Npc246543 6432455 Click to see 204.35 unknown via CMAUP database
> Lipids and lipid-like molecules / Saccharolipids
[(2S,3S,4R,5S,6S)-3,4,5-trihydroxy-6-[(E)-3-[(2S,3R)-2-(4-hydroxy-3-methoxyphenyl)-3-(hydroxymethyl)-7-methoxy-2,3-dihydro-1-benzofuran-5-yl]prop-2-enoxy]oxan-2-yl]methyl 4-hydroxy-2-methylidenebutanoate 162942263 Click to see 618.60 unknown https://doi.org/10.1021/NP9902791
[(2S,3S,4R,5S,6S)-3,4,5-trihydroxy-6-[(E)-3-[(2S,3S)-3-(hydroxymethyl)-7-methoxy-2-(3,4,5-trimethoxyphenyl)-2,3-dihydro-1-benzofuran-5-yl]prop-2-enoxy]oxan-2-yl]methyl 4-hydroxy-2-methylidenebutanoate 163041078 Click to see 662.70 unknown https://doi.org/10.1021/NP9902791
[(2S,3S,4S,5S,6S)-6-[(E)-3-[(2S,3S)-3-(acetyloxymethyl)-7-methoxy-2-(3,4,5-trimethoxyphenyl)-2,3-dihydro-1-benzofuran-5-yl]prop-2-enoxy]-3,4,5-trihydroxyoxan-2-yl]methyl 4-hydroxy-2-methylidenebutanoate 163003376 Click to see 704.70 unknown https://doi.org/10.1021/NP9902791
Woorenoside Iii 10462037 Click to see 662.70 unknown https://doi.org/10.1021/NP9902791
https://doi.org/10.1248/CPB.43.578
Woorenoside Iv 10101270 Click to see 704.70 unknown https://doi.org/10.1021/NP9902791
https://doi.org/10.1248/CPB.43.578
Woorenoside V 10031791 Click to see 618.60 unknown https://doi.org/10.1021/NP9902791
https://doi.org/10.1248/CPB.43.578
https://doi.org/10.1007/BF03216746
> Lipids and lipid-like molecules / Steroids and steroid derivatives / Steroid lactones / Cardenolides and derivatives / Cardenolide glycosides and derivatives
Corchorozide A 56840797 Click to see CC1C(C(CC(O1)OC2CCC3(C4CCC5(C(CCC5(C4CCC3(C2)O)O)C6=CC(=O)OC6)C)C=O)O)O 534.60 unknown via CMAUP database
> Lipids and lipid-like molecules / Steroids and steroid derivatives / Stigmastanes and derivatives
(-)-beta-Sitosterol 222284 Click to see 414.70 unknown via CMAUP database
17-(5-ethyl-6-methylheptan-2-yl)-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-ol 86821 Click to see CCC(CCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C)C(C)C 414.70 unknown via CMAUP database
Npc29 6432744 Click to see 414.70 unknown via CMAUP database
> Organic acids and derivatives / Carboxylic acids and derivatives / Amino acids, peptides, and analogues / Alpha amino acids and derivatives / Tyrosine and derivatives
L-Tyrosine 6057 Click to see 181.19 unknown https://doi.org/10.1016/S0031-9422(00)89789-7
> Organic nitrogen compounds / Organonitrogen compounds / Quaternary ammonium salts / Cholines
Choline 305 Click to see 104.17 unknown via CMAUP database
> Organic oxygen compounds / Organooxygen compounds / Alcohols and polyols / Cyclitols and derivatives / Quinic acids and derivatives
3-O-Feruloylquinic acid 9799386 Click to see 368.30 unknown via CMAUP database
4-O-Feruloylquinic acid 10177048 Click to see 368.30 unknown https://doi.org/10.1248/CPB.33.527
Chlorogenic Acid 1794427 Click to see C1C(C(C(CC1(C(=O)O)O)OC(=O)C=CC2=CC(=C(C=C2)O)O)O)O 354.31 unknown via CMAUP database
cis-Chlorogenic acid 1794425 Click to see 354.31 unknown via CMAUP database
Methyl 5-O-feruloylquinate 102004731 Click to see COC1=C(C=CC(=C1)C=CC(=O)OC2CC(CC(C2O)O)(C(=O)OC)O)O 382.40 unknown via CMAUP database
Npc196548 6171347 Click to see 368.30 unknown via CMAUP database
trans-(3S,5S)-1,3,5-trihydroxy-4-[(E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoyl]oxycyclohexane-1-carboxylic acid 101024370 Click to see 368.30 unknown via CMAUP database
> Organic oxygen compounds / Organooxygen compounds / Alcohols and polyols / Tertiary alcohols
Myrcenol 10975 Click to see CC(C)(CCCC(=C)C=C)O 154.25 unknown via CMAUP database
> Organoheterocyclic compounds / Benzazepines
Chilenine 11025386 Click to see 383.40 unknown via CMAUP database
> Organoheterocyclic compounds / Benzodioxoles
16,17-Dimethoxy-5,7-dioxa-13-azapentacyclo[11.8.0.02,10.04,8.015,20]henicosa-1(21),2,4(8),9,11,15(20),16,18-octaene 162999195 Click to see COC1=C(C2=C(C=C1)C=C3C4=CC5=C(C=C4C=CN3C2)OCO5)OC 335.40 unknown https://doi.org/10.1016/S0031-9422(00)84193-X
> Organoheterocyclic compounds / Isoquinolines and derivatives / Benzylisoquinolines
1-Benzylisoquinoline 23345 Click to see C1=CC=C(C=C1)CC2=NC=CC3=CC=CC=C32 219.28 unknown via CMAUP database
Coclaurine 160487 Click to see 285.34 unknown https://doi.org/10.1074/JBC.M106405200
Machiline 281691 Click to see COC1=C(C=C2C(NCCC2=C1)CC3=CC=C(C=C3)O)O 285.34 unknown https://doi.org/10.1074/JBC.M106405200
Methyl Coclaurine 2752274 Click to see 299.40 unknown https://doi.org/10.1074/JBC.M106405200
Reticuline 439653 Click to see 329.40 unknown https://doi.org/10.1074/JBC.M002439200
> Organoheterocyclic compounds / Isoquinolines and derivatives / Isoquinolones and derivatives
16-Methoxy-5,7-dioxa-1-azapentacyclo[11.8.0.03,11.04,8.014,19]henicosa-2,4(8),9,11,13,15,18-heptaen-17-one 11723579 Click to see COC1=CC2=C3C=C4C=CC5=C(C4=CN3CCC2=CC1=O)OCO5 321.30 unknown https://doi.org/10.1021/NP50031A038
2,9,10-Trimethoxy-5,6-dihydroisoquinolino[2,1-b]isoquinolin-3-one 10065647 Click to see 337.40 unknown https://doi.org/10.1248/YAKUSHI1947.110.4_268
https://doi.org/10.1021/JF9909297
8-Oxocoptisine 5245667 Click to see 335.30 unknown https://doi.org/10.1007/BF02974076
https://doi.org/10.1248/BPB.24.1277
Corydaldine 610097 Click to see 207.23 unknown via CMAUP database
Noroxyhydrastinine 89047 Click to see 191.18 unknown via CMAUP database
Oxyberberine 11066 Click to see 351.40 unknown https://doi.org/10.1007/BF02974076
https://doi.org/10.1021/NP50031A038
Oxyberberrubine 5384082 Click to see 337.30 unknown via CMAUP database
> Organoheterocyclic compounds / Quinolines and derivatives / Benzoquinolines / Phenanthridines and derivatives
17-Methoxy-13-methyl-5,7-dioxa-12-azapentacyclo[10.6.1.02,10.04,8.015,19]nonadeca-1(19),2,4(8),9,13,15,17-heptaen-11-one 44130138 Click to see CC1=CC2=CC(=CC3=C2N1C(=O)C4=CC5=C(C=C43)OCO5)OC 307.30 unknown via CMAUP database
Norsanguinarine 97679 Click to see 317.30 unknown https://doi.org/10.1021/NP50050A055
> Phenylpropanoids and polyketides / 2-arylbenzofuran flavonoids
(-)-(7R,8S,7'E)-3,4,5,5'-tetramethoxy-4',7-epoxy-8,3'-neolign-7'-ene-9,9'-diol 10024043 Click to see 402.40 unknown via CMAUP database
(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(E)-3-[(2S,3R)-3-(hydroxymethyl)-7-methoxy-2-(3,4,5-trimethoxyphenyl)-2,3-dihydro-1-benzofuran-5-yl]prop-2-enoxy]oxane-3,4,5-triol 163036964 Click to see COC1=CC(=CC2=C1OC(C2CO)C3=CC(=C(C(=C3)OC)OC)OC)C=CCOC4C(C(C(C(O4)CO)O)O)O 564.60 unknown https://doi.org/10.1021/NP9902791
[7-Methoxy-5-[3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyprop-1-enyl]-2-(3,4,5-trimethoxyphenyl)-2,3-dihydro-1-benzofuran-3-yl]methyl acetate 85111190 Click to see 606.60 unknown https://doi.org/10.1021/NP9902791
https://doi.org/10.1248/CPB.43.578
https://doi.org/10.1007/BF03216746
Woorenogenin 145709607 Click to see 402.40 unknown https://doi.org/10.1248/CPB.43.578
Woorenoside I 10347890 Click to see 564.60 unknown https://doi.org/10.1021/NP9902791
https://doi.org/10.1248/CPB.43.578
https://doi.org/10.1007/BF03216746
Woorenoside Ii 10326334 Click to see 606.60 unknown https://doi.org/10.1021/NP9902791
> Phenylpropanoids and polyketides / Cinnamic acids and derivatives / Hydroxycinnamic acids and derivatives / Coumaric acids and derivatives
Caffeic acid n-octadecyl ester 71374400 Click to see 432.60 unknown via CMAUP database
Ethyl Ferulate 736681 Click to see 222.24 unknown https://doi.org/10.1248/CPB.43.578
> Phenylpropanoids and polyketides / Cinnamic acids and derivatives / Hydroxycinnamic acids and derivatives / Hydroxycinnamic acids
Ferulic Acid 445858 Click to see 194.18 unknown via CMAUP database
> Phenylpropanoids and polyketides / Flavonoids / Flavones / Flavonols
Rhamnetin 5281691 Click to see 316.26 unknown via CMAUP database
> Phenylpropanoids and polyketides / Flavonoids / Flavonoid glycosides / Flavonoid O-glycosides / Flavonoid-3-O-glycosides
Quercitrin 5280459 Click to see 448.40 unknown https://doi.org/10.1021/JF020674O
> Phenylpropanoids and polyketides / Flavonoids / O-methylated flavonoids / 5-O-methylated flavonoids
5-O-Methylnaringenin 182315 Click to see COC1=CC(=CC2=C1C(=O)CC(O2)C3=CC=C(C=C3)O)O 286.28 unknown https://doi.org/10.1016/S0031-9422(00)81760-4
Naringenin 5-methyl ether 188424 Click to see 286.28 unknown https://doi.org/10.1016/S0031-9422(00)81760-4
> Phenylpropanoids and polyketides / Flavonoids / O-methylated flavonoids / 8-O-methylated flavonoids
Wogonin 5281703 Click to see 284.26 unknown via CMAUP database
> Phenylpropanoids and polyketides / Linear 1,3-diarylpropanoids / Chalcones and dihydrochalcones / 2-Hydroxy-dihydrochalcones
4,2',4'-Trihydroxy-6'-methoxydihydrochalcone 42607705 Click to see 288.29 unknown https://doi.org/10.1016/S0031-9422(00)81760-4

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