Rhamnocitrin

Details

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Internal ID 46370575-f8a5-4a95-be25-e8bdef1dbd88
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavones > Flavonols
IUPAC Name 3,5-dihydroxy-2-(4-hydroxyphenyl)-7-methoxychromen-4-one
SMILES (Canonical) COC1=CC(=C2C(=C1)OC(=C(C2=O)O)C3=CC=C(C=C3)O)O
SMILES (Isomeric) COC1=CC(=C2C(=C1)OC(=C(C2=O)O)C3=CC=C(C=C3)O)O
InChI InChI=1S/C16H12O6/c1-21-10-6-11(18)13-12(7-10)22-16(15(20)14(13)19)8-2-4-9(17)5-3-8/h2-7,17-18,20H,1H3
InChI Key MQSZRBPYXNEFHF-UHFFFAOYSA-N
Popularity 172 references in papers

Physical and Chemical Properties

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Molecular Formula C16H12O6
Molecular Weight 300.26 g/mol
Exact Mass 300.06338810 g/mol
Topological Polar Surface Area (TPSA) 96.20 Ų
XlogP 2.20
Atomic LogP (AlogP) 2.59
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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569-92-6
7-Methylkaempferol
3,4',5-Trihydroxy-7-methoxyflavone
3,5-dihydroxy-2-(4-hydroxyphenyl)-7-methoxychromen-4-one
CHEBI:80897
4H-1-Benzopyran-4-one, 3,5-dihydroxy-2-(4-hydroxyphenyl)-7-methoxy-
BZ59ZB4HBU
3,5,4''-TRIHYDROXY-7-METHOXYFLAVONE
Flavone, 3,4',5-trihydroxy-7-methoxy-
3,5-dihydroxy-2-(4-hydroxyphenyl)-7-methoxy-4H-1-benzopyran-4-one
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Rhamnocitrin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9779 97.79%
Caco-2 - 0.8512 85.12%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.8113 81.13%
OATP2B1 inhibitior - 0.5383 53.83%
OATP1B1 inhibitior + 0.8654 86.54%
OATP1B3 inhibitior + 0.9877 98.77%
MATE1 inhibitior + 0.5400 54.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.4661 46.61%
P-glycoprotein inhibitior - 0.4651 46.51%
P-glycoprotein substrate - 0.7937 79.37%
CYP3A4 substrate + 0.5576 55.76%
CYP2C9 substrate - 0.6401 64.01%
CYP2D6 substrate - 0.8296 82.96%
CYP3A4 inhibition - 0.6447 64.47%
CYP2C9 inhibition + 0.8876 88.76%
CYP2C19 inhibition + 0.9315 93.15%
CYP2D6 inhibition - 0.8064 80.64%
CYP1A2 inhibition + 0.9264 92.64%
CYP2C8 inhibition + 0.8996 89.96%
CYP inhibitory promiscuity + 0.7815 78.15%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5580 55.80%
Eye corrosion - 0.9749 97.49%
Eye irritation + 0.9037 90.37%
Skin irritation - 0.5737 57.37%
Skin corrosion - 0.9616 96.16%
Ames mutagenesis + 0.7600 76.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8733 87.33%
Micronuclear + 0.9200 92.00%
Hepatotoxicity - 0.6625 66.25%
skin sensitisation - 0.9457 94.57%
Respiratory toxicity - 0.5667 56.67%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.7740 77.40%
Acute Oral Toxicity (c) III 0.7641 76.41%
Estrogen receptor binding + 0.8571 85.71%
Androgen receptor binding + 0.9056 90.56%
Thyroid receptor binding + 0.6385 63.85%
Glucocorticoid receptor binding + 0.8963 89.63%
Aromatase binding + 0.8756 87.56%
PPAR gamma + 0.8883 88.83%
Honey bee toxicity - 0.9088 90.88%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.8637 86.37%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1951 P21397 Monoamine oxidase A 51 nM
IC50
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.71% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.94% 94.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 94.85% 99.15%
CHEMBL2581 P07339 Cathepsin D 94.23% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.78% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.70% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.59% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.10% 94.45%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 90.37% 95.64%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.35% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 88.70% 94.73%
CHEMBL3194 P02766 Transthyretin 86.81% 90.71%
CHEMBL242 Q92731 Estrogen receptor beta 85.82% 98.35%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.32% 99.17%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.46% 99.23%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 81.13% 93.65%
CHEMBL4208 P20618 Proteasome component C5 80.79% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Acicarpha tribuloides
Aconitum palmatum
Aconitum rotundifolium
Aeonium nobile
Ageratina havanensis
Ageratina ligustrina
Ageratum myriadenium
Aglaia elaeagnoidea
Aldama linearis
Alpinia oxyphylla
Alpinia tonkinensis
Ambrosia trifida
Aniba kappleri
Aniba rosaeodora
Anthyllis onobrychioides
Aquilaria sinensis
Ariocarpus fissuratus
Artemisia absinthium
Artemisia annua
Artemisia campestris
Artemisia capillaris
Artemisia carvifolia
Artemisia scoparia
Astragalus mongholicus
Baccharis dracunculifolia
Baccharis vaccinoides
Berteroa incana
Betula nigra
Bidens tripartita
Bryum argenteum
Calceolaria irazuensis
Callicarpa japonica
Campsis grandiflora
Carpesium faberi
Cheirolophus arbutifolius
Chromolaena odorata
Chrysobalanus icaco
Cirsium oligophyllum
Cistus laurifolius
Cistus monspeliensis
Cistus parviflorus
Codonopsis cordifolioidea
Coniogramme japonica
Coprosma areolata
Corydalis sewerzowi
Corymbia citriodora
Culcitium albifolium
Dahlstedtia pentaphylla
Dalbergia hupeana
Daphne genkwa
Dittrichia viscosa subsp. viscosa
Elephantopus hirtiflorus
Empetrum nigrum
Entada phaseoloides
Ericameria laricifolia
Euphorbia amygdaloides
Flemingia prostrata
Gelsemium elegans
Genista sessilifolia
Gmelina asiatica
Gomphostemma parviflorum
Haplopappus schumannii
Hasteola robusta
Helichrysum cephaloideum
Heliotropium chenopodiaceum
Hesperis matronalis
Hippobroma longiflora
Hirtellina fruticosa
Hypericum balearicum
Hypericum japonicum
Iris domestica
Iris tectorum
Jackiella javanica
Jatropha macrorhiza
Ligularia cymbulifera
Lilium philadelphicum
Madia sativa
Magnolia montana
Meehania urticifolia
Mirabilis viscosa
Nematolepis phebalioides
Nervilia fordii
Nothofagus cunninghamii
Onoseris alata
Osyris alba
Oxytropis ochrocephala
Pangium edule
Phyllanthus emblica
Phyllolobium chinense
Piper acutifolium
Pityrogramma ebenea
Platyosprion platycarpum
Pogostemon cablin
Populus cathayana
Populus nigra
Populus suaveolens
Populus tomentosa
Populus tremula
Populus tremuloides
Psilotum nudum
Rhamnus cathartica
Rhamnus disperma
Rhamnus lycioides
Rhamnus pallasii
Rhamnus prinoides
Searsia pyroides
Sedum yvesi
Senecio adenophyllus
Solanum paludosum
Solidago flexicaulis
Sterculia foetida
Syzygium aromaticum
Tamarix aphylla
Tamarix hispida
Tetracera sarmentosa
Trapa natans var. bicornis
Trollius chinensis
Vellozia streptophylla
Vigna mungo
Vitex quinata
Xyris indica
Zuccagnia punctata

Cross-Links

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PubChem 5320946
NPASS NPC143799
LOTUS LTS0198024
wikiData Q27151395