Violaxanthin

Details

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Internal ID 584b6dcb-688c-4824-a432-c88c7eb5063b
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Tetraterpenoids > Carotenoids > Xanthophylls
IUPAC Name (1R,3S,6S)-6-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4S,6R)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]heptan-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-1,5,5-trimethyl-7-oxabicyclo[4.1.0]heptan-3-ol
SMILES (Canonical) CC(=CC=CC=C(C)C=CC=C(C)C=CC12C(CC(CC1(O2)C)O)(C)C)C=CC=C(C)C=CC34C(CC(CC3(O4)C)O)(C)C
SMILES (Isomeric) C/C(=C\C=C\C=C(\C=C\C=C(\C=C\[C@@]12O[C@@]1(C[C@H](CC2(C)C)O)C)/C)/C)/C=C/C=C(/C=C/[C@@]34O[C@@]3(C[C@H](CC4(C)C)O)C)\C
InChI InChI=1S/C40H56O4/c1-29(17-13-19-31(3)21-23-39-35(5,6)25-33(41)27-37(39,9)43-39)15-11-12-16-30(2)18-14-20-32(4)22-24-40-36(7,8)26-34(42)28-38(40,10)44-40/h11-24,33-34,41-42H,25-28H2,1-10H3/b12-11+,17-13+,18-14+,23-21+,24-22+,29-15+,30-16+,31-19+,32-20+/t33-,34-,37+,38+,39-,40-/m0/s1
InChI Key SZCBXWMUOPQSOX-WVJDLNGLSA-N
Popularity 304 references in papers

Physical and Chemical Properties

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Molecular Formula C40H56O4
Molecular Weight 600.90 g/mol
Exact Mass 600.41786026 g/mol
Topological Polar Surface Area (TPSA) 65.50 Ų
XlogP 9.80
Atomic LogP (AlogP) 8.97
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 10

Synonyms

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126-29-4
all-trans-Violaxanthin
trans-Violaxanthin
Zeaxanthin diepoxide
(1R,3S,6S)-6-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4S,6R)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]heptan-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-1,5,5-trimethyl-7-oxabicyclo[4.1.0]heptan-3-ol
CHEBI:35288
E 161e
UNII-51C926029A
51C926029A
(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Violaxanthin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9754 97.54%
Caco-2 - 0.8134 81.34%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability + 0.5571 55.71%
Subcellular localzation Mitochondria 0.4735 47.35%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8782 87.82%
OATP1B3 inhibitior + 0.9625 96.25%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.9912 99.12%
P-glycoprotein inhibitior + 0.7620 76.20%
P-glycoprotein substrate - 0.8311 83.11%
CYP3A4 substrate + 0.6047 60.47%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7596 75.96%
CYP3A4 inhibition - 0.8778 87.78%
CYP2C9 inhibition - 0.8314 83.14%
CYP2C19 inhibition - 0.7199 71.99%
CYP2D6 inhibition - 0.9441 94.41%
CYP1A2 inhibition - 0.8519 85.19%
CYP2C8 inhibition - 0.8661 86.61%
CYP inhibitory promiscuity - 0.8434 84.34%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.8720 87.20%
Carcinogenicity (trinary) Non-required 0.5157 51.57%
Eye corrosion - 0.9854 98.54%
Eye irritation - 0.8904 89.04%
Skin irritation - 0.6620 66.20%
Skin corrosion - 0.9386 93.86%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8134 81.34%
Micronuclear - 0.6400 64.00%
Hepatotoxicity - 0.7046 70.46%
skin sensitisation - 0.5767 57.67%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.6111 61.11%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity + 0.6237 62.37%
Acute Oral Toxicity (c) III 0.3944 39.44%
Estrogen receptor binding + 0.8511 85.11%
Androgen receptor binding + 0.7349 73.49%
Thyroid receptor binding + 0.6812 68.12%
Glucocorticoid receptor binding + 0.7672 76.72%
Aromatase binding + 0.5929 59.29%
PPAR gamma + 0.7297 72.97%
Honey bee toxicity - 0.7802 78.02%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9004 90.04%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.21% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.07% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 91.79% 83.82%
CHEMBL2061 P19793 Retinoid X receptor alpha 85.65% 91.67%
CHEMBL1870 P28702 Retinoid X receptor beta 84.44% 95.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.35% 89.00%
CHEMBL2004 P48443 Retinoid X receptor gamma 83.51% 100.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.30% 92.94%
CHEMBL259 P32245 Melanocortin receptor 4 82.78% 95.38%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.80% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.15% 95.89%
CHEMBL221 P23219 Cyclooxygenase-1 80.09% 90.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Acacia adunca
Aconitum burnatii
Adiantum philippense
Agastache foeniculum
Agnorhiza bolanderi
Aldama incana
Allium rotundum
Aloe arborescens
Alseodaphne paludosa
Anaxagorea crassipetala
Annona cornifolia
Annona impressivenia
Arabidopsis thaliana
Araujia sericifera
Arnica nevadensis
Artemisia gmelinii
Artemisia pedemontana subsp. assoana
Asparagus falcatus
Astragalus sempervirens
Bersama yangambiensis
Beyeria sulcata var. brevipes
Brassica oleracea
Bursaria spinosa
Calamus draco
Caloncoba echinata
Calostephane divaricata
Camellia sasanqua
Capsicum annuum
Caragana aurantiaca
Carica papaya
Castanopsis sclerophylla
Celastrus orbiculatus
Chaenomeles sinensis
Chloranthus tianmushanensis
Chromolaena odorata
Chromolaena pulchella
Citrus × aurantium
Citrus trifoliata
Coffea arabica
Conocephalum japonicum
Cordylanthus kingii
Craibia grandiflora
Crepis tectorum
Croton cascarilloides
Croton megistocarpus
Cucurbita maxima
Dendrosenecio kilimanjari
Diospyros kaki
Dipterocarpus alatus
Disynaphia halimifolia
Drosera peltata
Dumortiera hirsuta
Echeveria secunda
Echinops amplexicaulis
Equisetum fluviatile
Eragrostis viscosa
Eschscholzia californica
Eucalyptus melliodora
Euonymus japonicus
Excoecaria acerifolia
Ficus formosana
Forsteronia refracta
Fridericia chica
Gardenia fosbergii
Garrya laurifolia
Geranium sibiricum
Ginkgo biloba
Gnetum latifolium
Goniothalamus malayanus
Goupia glabra
Grewia mollis
Gymnocarpium robertianum
Hedysarum inundatum
Heliotropium floridum
Hemerocallis fulva var. angustifolia
Heterotheca grandiflora
Hovenia acerba
Hypericum laricifolium
Ilex affinis
Impatiens noli-tangere
Ipomoea digitata
Iris pseudacorus
Isodon umbrosus
Juglans nigra
Kaempferia marginata
Kaempferia pulchra
Kaunia saltensis
Lagerstroemia indica
Laggera alata
Lepisorus ussuriensis
Litogyne gariepina
Lysimachia mauritiana
Machilus japonica
Mangifera indica
Marrubium anisodon
Medinilla magnifica
Mesua ferrea
Metasequoia glyptostroboides
Momordica charantia
Moringa oleifera
Nauclea officinalis
Naucleopsis ternstroemiiflora
Ocotea pittieri
Odixia angusta
Onobrychis bobrovii
Orobanche owerinii
Panzerina lanata
Papaver persicum
Passiflora edulis
Pastinaca sativa
Peltostigma guatemalense
Perilla frutescens
Petteria ramentacea
Pittosporum tobira
Premna odorata
Prosopis glandulosa
Prunus laurocerasus
Prunus persica
Pteris plumieri
Pyrus communis
Quercus cerris
Rauvolfia vomitoria
Rhodanthe chlorocephala subsp. rosea
Rumex maritimus
Ruta pinnata
Salvia dorrii
Salvia officinalis
Salvia syriaca
Scutellaria amoena
Senecio cathcartensis
Senecio isatideus
Senecio squalidus
Sequoia sempervirens
Seriphidium cinum
Sesbania punicea
Simira eliezeriana
Solanum laxum
Solanum tuberosum
Sophora flavescens var. flavescens
Sorbus pallescens
Spinacia oleracea
Stenostomum lucidum
Stevia polycephala
Strobilanthes cusia
Swertia franchetiana
Syncarpha gnaphaloides
Taxodium huegelii
Terminalia catappa
Teucrium cubense
Thymus piperella
Trichilia rubescens
Trigonella foenum-graecum
Uraria picta
Vaccinium oxycoccos
Viola tricolor
Viscum album
Vitex madiensis
Vitis vinifera
Wikstroemia retusa
Zanthoxylum tetraspermum
Zea mays
Zostera marina

Cross-Links

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PubChem 448438
NPASS NPC10559
LOTUS LTS0102265
wikiData Q607883