Vicenin 2

Details

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Internal ID 88e88a62-a9f9-4e37-aa93-7d32de6af655
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid C-glycosides > Flavonoid 8-C-glycosides
IUPAC Name 5,7-dihydroxy-2-(4-hydroxyphenyl)-6,8-bis[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]chromen-4-one
SMILES (Canonical) C1=CC(=CC=C1C2=CC(=O)C3=C(C(=C(C(=C3O2)C4C(C(C(C(O4)CO)O)O)O)O)C5C(C(C(C(O5)CO)O)O)O)O)O
SMILES (Isomeric) C1=CC(=CC=C1C2=CC(=O)C3=C(C(=C(C(=C3O2)[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O)[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O)O
InChI InChI=1S/C27H30O15/c28-6-12-17(32)21(36)23(38)26(41-12)15-19(34)14-10(31)5-11(8-1-3-9(30)4-2-8)40-25(14)16(20(15)35)27-24(39)22(37)18(33)13(7-29)42-27/h1-5,12-13,17-18,21-24,26-30,32-39H,6-7H2/t12-,13-,17-,18-,21+,22+,23-,24-,26+,27+/m1/s1
InChI Key FIAAVMJLAGNUKW-VQVVXJKKSA-N
Popularity 61 references in papers

Physical and Chemical Properties

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Molecular Formula C27H30O15
Molecular Weight 594.50 g/mol
Exact Mass 594.15847025 g/mol
Topological Polar Surface Area (TPSA) 267.00 Ų
XlogP -2.30
Atomic LogP (AlogP) -2.39
H-Bond Acceptor 15
H-Bond Donor 11
Rotatable Bonds 5

Synonyms

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Vicenin 2
Vicenin II
Vicenin-2
Violantin
Vicenin -2
Vicenin
CHEBI:69814
MLS000575019
6,8-di-c-glucosylapigenin
5,7,4'-Trihydroxyflavone-6,8-di-C-glucoside
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Vicenin 2

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6251 62.51%
Caco-2 - 0.9152 91.52%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.5454 54.54%
OATP2B1 inhibitior - 0.5548 55.48%
OATP1B1 inhibitior + 0.7711 77.11%
OATP1B3 inhibitior + 0.9752 97.52%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.6705 67.05%
P-glycoprotein inhibitior - 0.5691 56.91%
P-glycoprotein substrate - 0.8398 83.98%
CYP3A4 substrate + 0.5621 56.21%
CYP2C9 substrate - 0.6194 61.94%
CYP2D6 substrate - 0.8416 84.16%
CYP3A4 inhibition - 0.8760 87.60%
CYP2C9 inhibition - 0.9182 91.82%
CYP2C19 inhibition - 0.9102 91.02%
CYP2D6 inhibition - 0.9445 94.45%
CYP1A2 inhibition - 0.8801 88.01%
CYP2C8 inhibition + 0.6604 66.04%
CYP inhibitory promiscuity - 0.7721 77.21%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6914 69.14%
Eye corrosion - 0.9937 99.37%
Eye irritation - 0.8867 88.67%
Skin irritation - 0.7949 79.49%
Skin corrosion - 0.9613 96.13%
Ames mutagenesis + 0.6329 63.29%
Human Ether-a-go-go-Related Gene inhibition + 0.7423 74.23%
Micronuclear + 0.6459 64.59%
Hepatotoxicity - 0.7446 74.46%
skin sensitisation - 0.8739 87.39%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.6625 66.25%
Nephrotoxicity - 0.6787 67.87%
Acute Oral Toxicity (c) IV 0.4242 42.42%
Estrogen receptor binding + 0.7148 71.48%
Androgen receptor binding + 0.7374 73.74%
Thyroid receptor binding - 0.5169 51.69%
Glucocorticoid receptor binding - 0.5206 52.06%
Aromatase binding + 0.6474 64.74%
PPAR gamma + 0.7165 71.65%
Honey bee toxicity - 0.7665 76.65%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.6549 65.49%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293226 B2RXH2 Lysine-specific demethylase 4D-like 28183.8 nM
Potency
via CMAUP
CHEMBL2608 P10253 Lysosomal alpha-glucosidase 35481.3 nM
35481.3 nM
Potency
Potency
via CMAUP
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.35% 91.11%
CHEMBL2581 P07339 Cathepsin D 98.05% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.61% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.73% 94.00%
CHEMBL3401 O75469 Pregnane X receptor 89.61% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.95% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.89% 95.56%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 86.20% 99.15%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.69% 86.92%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.08% 97.09%
CHEMBL5284 Q96RR4 CaM-kinase kinase beta 82.75% 89.23%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.70% 96.21%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.26% 99.17%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 81.97% 91.71%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 81.76% 93.10%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.13% 90.71%
CHEMBL242 Q92731 Estrogen receptor beta 80.62% 98.35%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 80.51% 85.11%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Abies veitchii
Aconitum leucostomum
Ainsliaea macrocephala
Aiouea montana
Aquilegia ecalcarata
Artemisia annua
Artemisia carvifolia
Artemisia szowitziana
Ballota nigra
Blumea axillaris
Bombax ceiba
Boronia ternata
Buxus microphylla
Buxus sempervirens
Camellia sinensis
Capsicum annuum
Casearia membranacea
Ceanothus velutinus
Cephalaria ambrosioides
Chamaecytisus ratisbonensis
Chlorophytum borivilianum
Cinnamomum kotoense
Citrus japonica
Citrus limon
Citrus maxima
Colchicum robustum
Conospermum teretifolium
Cucumis sativus
Cyperus alopecuroides
Dicoma anomala
Dipterocarpus dyeri
Ephedra alata
Ephedra aphylla
Epidendrum rigidum
Fragaria vesca
Galeopsis tetrahit
Gamblea innovans
Garcinia scortechinii
Gardenia tubifera
Glinus lotoides
Glinus oppositifolius
Glycyrrhiza
Glycyrrhiza glabra
Glycyrrhiza inflata
Glycyrrhiza uralensis
Gnetum africanum
Gratiola officinalis
Grona styracifolia
Ipomoea cairica
Isatis tinctoria
Isodon lophanthoides
Kopsia grandifolia
Lasianthus fordii
Ledebouria socialis
Linum grandiflorum
Luculia pinceana
Lychnophora ericoides
Lychnophora pohlii
Lycopus europaeus
Marrubium vulgare
Medicago truncatula
Melaleuca cuticularis
Mitracarpus hirtus
Nepeta cataria
Nervilia fordii
Origanum vulgare
Parkinsonia aculeata
Passiflora edulis
Perilla frutescens
Persea barbujana
Persicaria tinctoria
Pinus mugo
Pityrogramma ebenea
Portulaca oleracea
Potentilla anserina
Primula spectabilis
Pteris multifida
Retama sphaerocarpa
Salvia fruticosa
Salvia officinalis
Santalum album
Scleropyrum pentandrum
Scoparia dulcis
Senna alexandrina
Sicyos edulis
Sigesbeckia glabrescens
Sigesbeckia pubescens
Silybum marianum
Strychnos camptoneura
Thunbergia laurifolia
Thymbra capitata
Trichophorum cespitosum
Triticum aestivum
Urtica circularis
Vachellia pennatula
Vellozia nivea
Vepris gabonensis
Xanthosoma sagittifolium
Zanthoxylum ailanthoides
Ziziphus jujuba

Cross-Links

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PubChem 442664
NPASS NPC112701
ChEMBL CHEMBL1442950
LOTUS LTS0103522
wikiData Q72516285