Secoisolariciresinol

Details

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Internal ID 253507db-11eb-45c3-979c-8b4cfe857fcd
Taxonomy Lignans, neolignans and related compounds > Dibenzylbutane lignans > Dibenzylbutanediol lignans
IUPAC Name (2R,3R)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,4-diol
SMILES (Canonical) COC1=C(C=CC(=C1)CC(CO)C(CC2=CC(=C(C=C2)O)OC)CO)O
SMILES (Isomeric) COC1=C(C=CC(=C1)C[C@@H](CO)[C@@H](CC2=CC(=C(C=C2)O)OC)CO)O
InChI InChI=1S/C20H26O6/c1-25-19-9-13(3-5-17(19)23)7-15(11-21)16(12-22)8-14-4-6-18(24)20(10-14)26-2/h3-6,9-10,15-16,21-24H,7-8,11-12H2,1-2H3/t15-,16-/m0/s1
InChI Key PUETUDUXMCLALY-HOTGVXAUSA-N
Popularity 604 references in papers

Physical and Chemical Properties

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Molecular Formula C20H26O6
Molecular Weight 362.40 g/mol
Exact Mass 362.17293854 g/mol
Topological Polar Surface Area (TPSA) 99.40 Ų
XlogP 2.50
Atomic LogP (AlogP) 2.12
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 9

Synonyms

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29388-59-8
(-)-Secoisolariciresinol
CCRIS 7790
M8QRJ7JEJH
UNII-M8QRJ7JEJH
EINECS 249-599-2
(2R,3R)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,4-diol
CHEMBL368347
CHEBI:65004
(2R,3R)-2,3-bis(4-hydroxy-3-methoxybenzyl)butane-1,4-diol
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Secoisolariciresinol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9378 93.78%
Caco-2 + 0.5058 50.58%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.8966 89.66%
OATP2B1 inhibitior - 0.8556 85.56%
OATP1B1 inhibitior + 0.9157 91.57%
OATP1B3 inhibitior + 0.9348 93.48%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.4568 45.68%
P-glycoprotein inhibitior - 0.4395 43.95%
P-glycoprotein substrate - 0.8682 86.82%
CYP3A4 substrate - 0.6289 62.89%
CYP2C9 substrate - 0.6000 60.00%
CYP2D6 substrate + 0.4255 42.55%
CYP3A4 inhibition - 0.5137 51.37%
CYP2C9 inhibition - 0.5549 55.49%
CYP2C19 inhibition + 0.6283 62.83%
CYP2D6 inhibition - 0.8490 84.90%
CYP1A2 inhibition + 0.6381 63.81%
CYP2C8 inhibition + 0.5859 58.59%
CYP inhibitory promiscuity + 0.6134 61.34%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.7460 74.60%
Carcinogenicity (trinary) Non-required 0.6732 67.32%
Eye corrosion - 0.9842 98.42%
Eye irritation - 0.7695 76.95%
Skin irritation - 0.8239 82.39%
Skin corrosion - 0.9616 96.16%
Ames mutagenesis - 0.7644 76.44%
Human Ether-a-go-go-Related Gene inhibition + 0.8163 81.63%
Micronuclear - 0.6500 65.00%
Hepatotoxicity - 0.6922 69.22%
skin sensitisation - 0.7735 77.35%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.6111 61.11%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.8240 82.40%
Acute Oral Toxicity (c) III 0.7568 75.68%
Estrogen receptor binding + 0.8019 80.19%
Androgen receptor binding + 0.7500 75.00%
Thyroid receptor binding + 0.6727 67.27%
Glucocorticoid receptor binding + 0.6204 62.04%
Aromatase binding + 0.5691 56.91%
PPAR gamma + 0.5331 53.31%
Honey bee toxicity - 0.9095 90.95%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5349 53.49%
Fish aquatic toxicity + 0.9503 95.03%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL340 P08684 Cytochrome P450 3A4 47300 nM
IC50
PMID: 21138310

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.13% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.16% 91.11%
CHEMBL1255126 O15151 Protein Mdm4 93.22% 90.20%
CHEMBL2581 P07339 Cathepsin D 93.12% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 92.12% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.47% 94.45%
CHEMBL3492 P49721 Proteasome Macropain subunit 87.93% 90.24%
CHEMBL2535 P11166 Glucose transporter 87.62% 98.75%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.57% 86.33%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 85.04% 99.15%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.32% 95.56%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 82.89% 95.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.69% 94.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 82.40% 92.62%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.97% 95.89%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 81.28% 89.62%

Cross-Links

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PubChem 65373
NPASS NPC85488
ChEMBL CHEMBL368347
LOTUS LTS0086727
wikiData Q4413253