(-)-Stachydrine

Details

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Internal ID f872660f-a22a-4f31-ab76-3edc1aeceeae
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives > Proline and derivatives
IUPAC Name (2S)-1,1-dimethylpyrrolidin-1-ium-2-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C7H13NO2/c1-8(2)5-3-4-6(8)7(9)10/h6H,3-5H2,1-2H3/t6-/m0/s1
InChI Key CMUNUTVVOOHQPW-LURJTMIESA-N
Popularity 157 references in papers

Physical and Chemical Properties

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Molecular Formula C7H13NO2
Molecular Weight 143.18 g/mol
Exact Mass 143.094628657 g/mol
Topological Polar Surface Area (TPSA) 40.10 Ų
XlogP 1.00
Atomic LogP (AlogP) -1.02
H-Bond Acceptor 2
H-Bond Donor 0
Rotatable Bonds 1

Synonyms

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471-87-4
L-proline betaine
N,N-dimethyl-L-proline
methyl hygrate betaine
(-)-Stachydrine
dimethylproline
CHEBI:35280
(2S)-1,1-dimethylpyrrolidinium-2-carboxylate
S1L688345C
Pyrrolidinium, 2-carboxy-1,1-dimethyl-, inner salt, (2S)-
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of (-)-Stachydrine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9339 93.39%
Caco-2 + 0.7508 75.08%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability + 0.6714 67.14%
Subcellular localzation Lysosomes 0.4748 47.48%
OATP2B1 inhibitior - 0.8297 82.97%
OATP1B1 inhibitior + 0.9548 95.48%
OATP1B3 inhibitior + 0.9460 94.60%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior - 0.9716 97.16%
P-glycoprotein inhibitior - 0.9848 98.48%
P-glycoprotein substrate - 0.9784 97.84%
CYP3A4 substrate - 0.6169 61.69%
CYP2C9 substrate - 0.5971 59.71%
CYP2D6 substrate - 0.8320 83.20%
CYP3A4 inhibition - 0.9641 96.41%
CYP2C9 inhibition - 0.9452 94.52%
CYP2C19 inhibition - 0.9208 92.08%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9137 91.37%
CYP2C8 inhibition - 0.9758 97.58%
CYP inhibitory promiscuity - 0.9825 98.25%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.6721 67.21%
Eye corrosion - 0.8679 86.79%
Eye irritation + 0.9860 98.60%
Skin irritation - 0.6234 62.34%
Skin corrosion - 0.6079 60.79%
Ames mutagenesis - 0.7900 79.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7627 76.27%
Micronuclear - 0.8400 84.00%
Hepatotoxicity + 0.8125 81.25%
skin sensitisation - 0.8748 87.48%
Respiratory toxicity - 0.8000 80.00%
Reproductive toxicity + 0.5556 55.56%
Mitochondrial toxicity + 0.6625 66.25%
Nephrotoxicity - 0.8058 80.58%
Acute Oral Toxicity (c) III 0.5343 53.43%
Estrogen receptor binding - 0.9478 94.78%
Androgen receptor binding - 0.5656 56.56%
Thyroid receptor binding - 0.9142 91.42%
Glucocorticoid receptor binding - 0.8411 84.11%
Aromatase binding - 0.8658 86.58%
PPAR gamma - 0.9054 90.54%
Honey bee toxicity - 0.9657 96.57%
Biodegradation + 0.7250 72.50%
Crustacea aquatic toxicity - 0.7600 76.00%
Fish aquatic toxicity - 0.4365 43.65%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1963 P16473 Thyroid stimulating hormone receptor 10000 nM
Potency
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 99.67% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.52% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.43% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.97% 95.56%
CHEMBL340 P08684 Cytochrome P450 3A4 83.17% 91.19%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.32% 92.94%

Cross-Links

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PubChem 115244
NPASS NPC274499
ChEMBL CHEMBL1456892
LOTUS LTS0190320
wikiData Q27104306