Delphinidin 3-O-glucoside cation

Details

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Internal ID 84de1c13-9f23-4407-910a-d5436cc60e18
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Anthocyanins > Anthocyanidin-3-O-glycosides
IUPAC Name (2S,3R,4S,5S,6R)-2-[5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)chromenylium-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) C1=C(C=C(C(=C1O)O)O)C2=[O+]C3=CC(=CC(=C3C=C2OC4C(C(C(C(O4)CO)O)O)O)O)O
SMILES (Isomeric) C1=C(C=C(C(=C1O)O)O)C2=[O+]C3=CC(=CC(=C3C=C2O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O)O
InChI InChI=1S/C21H20O12/c22-6-15-17(28)18(29)19(30)21(33-15)32-14-5-9-10(24)3-8(23)4-13(9)31-20(14)7-1-11(25)16(27)12(26)2-7/h1-5,15,17-19,21-22,28-30H,6H2,(H4-,23,24,25,26,27)/p+1/t15-,17-,18+,19-,21-/m1/s1
InChI Key XENHPQQLDPAYIJ-PEVLUNPASA-O
Popularity 65 references in papers

Physical and Chemical Properties

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Molecular Formula C21H21O12+
Molecular Weight 465.40 g/mol
Exact Mass 465.10330110 g/mol
Topological Polar Surface Area (TPSA) 202.00 Ų
XlogP 0.00
Atomic LogP (AlogP) 0.09
H-Bond Acceptor 11
H-Bond Donor 9
Rotatable Bonds 4

Synonyms

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Delphinidin 3-O-glucoside
50986-17-9
Delphinidin 3-O-glucoside cation
UNII-8XEQ4P5O4Z
8XEQ4P5O4Z
Delphinidin 3-O-beta-D-glucoside
CHEBI:31463
(2S,3R,4S,5S,6R)-2-[5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)chromenylium-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
1-Benzopyrylium, 3-(beta-D-glucopyranosyloxy)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-
delphinidin 3-O-beta-glucoside
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Delphinidin 3-O-glucoside cation

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8136 81.36%
Caco-2 - 0.8983 89.83%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Nucleus 0.4412 44.12%
OATP2B1 inhibitior + 0.5895 58.95%
OATP1B1 inhibitior + 0.8836 88.36%
OATP1B3 inhibitior + 0.9404 94.04%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.6675 66.75%
P-glycoprotein inhibitior - 0.6389 63.89%
P-glycoprotein substrate - 0.8339 83.39%
CYP3A4 substrate + 0.5611 56.11%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8268 82.68%
CYP3A4 inhibition - 0.9550 95.50%
CYP2C9 inhibition - 0.9002 90.02%
CYP2C19 inhibition - 0.8426 84.26%
CYP2D6 inhibition - 0.9191 91.91%
CYP1A2 inhibition - 0.8856 88.56%
CYP2C8 inhibition + 0.7605 76.05%
CYP inhibitory promiscuity - 0.7819 78.19%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6532 65.32%
Eye corrosion - 0.9919 99.19%
Eye irritation - 0.7283 72.83%
Skin irritation - 0.8047 80.47%
Skin corrosion - 0.9630 96.30%
Ames mutagenesis - 0.6791 67.91%
Human Ether-a-go-go-Related Gene inhibition - 0.3599 35.99%
Micronuclear + 0.6359 63.59%
Hepatotoxicity - 0.7750 77.50%
skin sensitisation - 0.9067 90.67%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.8463 84.63%
Acute Oral Toxicity (c) III 0.4439 44.39%
Estrogen receptor binding + 0.7566 75.66%
Androgen receptor binding + 0.6834 68.34%
Thyroid receptor binding + 0.5833 58.33%
Glucocorticoid receptor binding + 0.7549 75.49%
Aromatase binding + 0.7136 71.36%
PPAR gamma + 0.7506 75.06%
Honey bee toxicity - 0.7857 78.57%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6049 60.49%
Fish aquatic toxicity + 0.7666 76.66%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.54% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.60% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.40% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.26% 96.09%
CHEMBL1951 P21397 Monoamine oxidase A 90.94% 91.49%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 90.37% 99.15%
CHEMBL3194 P02766 Transthyretin 90.16% 90.71%
CHEMBL241 Q14432 Phosphodiesterase 3A 89.10% 92.94%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.81% 99.17%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 88.51% 83.57%
CHEMBL3714130 P46095 G-protein coupled receptor 6 85.76% 97.36%
CHEMBL2424 Q04760 Glyoxalase I 84.78% 91.67%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 83.69% 95.78%
CHEMBL1937 Q92769 Histone deacetylase 2 83.47% 94.75%
CHEMBL3401 O75469 Pregnane X receptor 82.82% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.65% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.18% 86.33%
CHEMBL2581 P07339 Cathepsin D 82.09% 98.95%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.75% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Acacia adunca
Aconitum violaceum
Actiniopteris radiata
Adiantum philippense
Aglaia laxiflora
Aldama incana
Allium cepa
Annona cornifolia
Aronia melanocarpa
Artemisia carvifolia
Artemisia pedemontana subsp. assoana
Astragalus sempervirens
Callicarpa maingayi
Calostephane divaricata
Caragana aurantiaca
Centaurea virgata subsp. squarrosa
Cephalaria uralensis
Chaenomeles sinensis
Clitoria ternatea
Codonopsis pilosula
Crocus sativus
Crotalaria aegyptiaca
Delphinium shawurense
Dicoma capensis
Digitalis isabelliana
Dumortiera hirsuta
Echeveria secunda
Ericameria parryi
Eucalyptus melliodora
Euphorbia turczaninowii
Fagraea gracilipes
Garcinia xipshuanbannaensis
Geranium sylvaticum
Glycine max
Gnetum latifolium
Goniothalamus malayanus
Gutierrezia microcephala
Haplophyllum ferganicum
Hedysarum inundatum
Helichrysum graveolens
Hydrangea macrophylla
Hypericum laricifolium
Ipomoea digitata
Iryanthera paraensis
Lathyrus nissolia
Leonurus persicus
Lepisorus ussuriensis
Litsea rotundifolia
Lysimachia mauritiana
Magnolia sieboldii
Malva sylvestris
Marrubium anisodon
Morus alba
Naucleopsis ternstroemiiflora
Ocotea pittieri
Pastinaca sativa
Peltogyne floribunda
Peltostigma guatemalense
Phaseolus vulgaris
Pinus banksiana
Premna odorata
Punica granatum
Ratibida mexicana
Rauvolfia vomitoria
Rhodanthe chlorocephala subsp. rosea
Ribes nigrum
Ribes rubrum
Rubus idaeus
Rumex maritimus
Salvia syriaca
Scopolia carniolica
Scutellaria amoena
Solanum laxum
Sonchus ortunoi
Styrax ferrugineus
Swertia franchetiana
Vaccinium corymbosum
Vaccinium myrtillus
Vaccinium oxycoccos
Vincetoxicum hirundinaria
Vitis vinifera
Wikstroemia retusa
Zanthoxylum tetraspermum

Cross-Links

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PubChem 443650
NPASS NPC37793
ChEMBL CHEMBL518846
LOTUS LTS0010677
wikiData Q27114317