Cyanidin 3-O-galactoside

Details

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Internal ID 9f75215e-9b1d-4c0b-a8be-7c7686767577
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Anthocyanins > Anthocyanidin-3-O-glycosides
IUPAC Name (2S,3R,4S,5R,6R)-2-[2-(3,4-dihydroxyphenyl)-5,7-dihydroxychromenylium-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) C1=CC(=C(C=C1C2=[O+]C3=CC(=CC(=C3C=C2OC4C(C(C(C(O4)CO)O)O)O)O)O)O)O
SMILES (Isomeric) C1=CC(=C(C=C1C2=[O+]C3=CC(=CC(=C3C=C2O[C@H]4[C@@H]([C@H]([C@H]([C@H](O4)CO)O)O)O)O)O)O)O
InChI InChI=1S/C21H20O11/c22-7-16-17(27)18(28)19(29)21(32-16)31-15-6-10-12(25)4-9(23)5-14(10)30-20(15)8-1-2-11(24)13(26)3-8/h1-6,16-19,21-22,27-29H,7H2,(H3-,23,24,25,26)/p+1/t16-,17+,18+,19-,21-/m1/s1
InChI Key RKWHWFONKJEUEF-WVXKDWSHSA-O
Popularity 40 references in papers

Physical and Chemical Properties

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Molecular Formula C21H21O11+
Molecular Weight 449.40 g/mol
Exact Mass 449.10838648 g/mol
Topological Polar Surface Area (TPSA) 181.00 Ų
XlogP 0.00
Atomic LogP (AlogP) 0.38
H-Bond Acceptor 10
H-Bond Donor 8
Rotatable Bonds 4

Synonyms

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142506-26-1
Cyanidin 3-galactoside cation
Cyanidin 3-o-galactoside cation
UNII-YM35G4AYEY
YM35G4AYEY
CHEBI:27475
Cyanidin 3-O-beta-galactopyranoside
Idaein
(2S,3R,4S,5R,6R)-2-[2-(3,4-dihydroxyphenyl)-5,7-dihydroxychromenylium-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
1-Benzopyrylium, 2-(3,4-dihydroxyphenyl)-3-(beta-D-galactopyranosyloxy)-5,7-dihydroxy-
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Cyanidin 3-O-galactoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8136 81.36%
Caco-2 - 0.8921 89.21%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Nucleus 0.4412 44.12%
OATP2B1 inhibitior + 0.5876 58.76%
OATP1B1 inhibitior + 0.9309 93.09%
OATP1B3 inhibitior + 0.9404 94.04%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.7183 71.83%
P-glycoprotein inhibitior - 0.6860 68.60%
P-glycoprotein substrate - 0.8592 85.92%
CYP3A4 substrate + 0.5715 57.15%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8268 82.68%
CYP3A4 inhibition - 0.9550 95.50%
CYP2C9 inhibition - 0.9002 90.02%
CYP2C19 inhibition - 0.8426 84.26%
CYP2D6 inhibition - 0.9191 91.91%
CYP1A2 inhibition - 0.8856 88.56%
CYP2C8 inhibition + 0.8164 81.64%
CYP inhibitory promiscuity - 0.7819 78.19%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6532 65.32%
Eye corrosion - 0.9919 99.19%
Eye irritation - 0.7073 70.73%
Skin irritation - 0.8047 80.47%
Skin corrosion - 0.9630 96.30%
Ames mutagenesis - 0.5137 51.37%
Human Ether-a-go-go-Related Gene inhibition - 0.4694 46.94%
Micronuclear + 0.6359 63.59%
Hepatotoxicity - 0.8321 83.21%
skin sensitisation - 0.9067 90.67%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.7457 74.57%
Acute Oral Toxicity (c) III 0.4439 44.39%
Estrogen receptor binding + 0.7517 75.17%
Androgen receptor binding + 0.6917 69.17%
Thyroid receptor binding + 0.5977 59.77%
Glucocorticoid receptor binding + 0.7298 72.98%
Aromatase binding + 0.7175 71.75%
PPAR gamma + 0.7415 74.15%
Honey bee toxicity - 0.7367 73.67%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5449 54.49%
Fish aquatic toxicity + 0.7666 76.66%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL284 P27487 Dipeptidyl peptidase IV 420 nM
IC50
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.30% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 96.01% 91.49%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 94.22% 99.15%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.22% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.14% 96.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.39% 94.00%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 88.82% 95.78%
CHEMBL2581 P07339 Cathepsin D 88.59% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.42% 99.17%
CHEMBL3194 P02766 Transthyretin 86.69% 90.71%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.35% 86.33%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.75% 92.94%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 84.66% 89.62%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.24% 86.92%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.52% 97.09%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.60% 95.83%

Cross-Links

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PubChem 441699
NPASS NPC159451
LOTUS LTS0186861
wikiData Q63399308