Nortrachelogenin

Details

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Internal ID de178771-14d3-4d53-ab59-003c6c461892
Taxonomy Lignans, neolignans and related compounds > Furanoid lignans > Tetrahydrofuran lignans > 9,9-epoxylignans > Dibenzylbutyrolactone lignans
IUPAC Name (3S,4S)-3-hydroxy-3,4-bis[(4-hydroxy-3-methoxyphenyl)methyl]oxolan-2-one
SMILES (Canonical) COC1=C(C=CC(=C1)CC2COC(=O)C2(CC3=CC(=C(C=C3)O)OC)O)O
SMILES (Isomeric) COC1=C(C=CC(=C1)C[C@H]2COC(=O)[C@@]2(CC3=CC(=C(C=C3)O)OC)O)O
InChI InChI=1S/C20H22O7/c1-25-17-8-12(3-5-15(17)21)7-14-11-27-19(23)20(14,24)10-13-4-6-16(22)18(9-13)26-2/h3-6,8-9,14,21-22,24H,7,10-11H2,1-2H3/t14-,20-/m0/s1
InChI Key ZITBJWXLODLDRH-XOBRGWDASA-N
Popularity 19 references in papers

Physical and Chemical Properties

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Molecular Formula C20H22O7
Molecular Weight 374.40 g/mol
Exact Mass 374.13655304 g/mol
Topological Polar Surface Area (TPSA) 105.00 Ų
XlogP 2.50
Atomic LogP (AlogP) 1.80
H-Bond Acceptor 7
H-Bond Donor 3
Rotatable Bonds 6

Synonyms

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34444-37-6
Pinopalustrin
(-)-Wikstromol
Dibenzylbutyrolactone
NSC 271296
(-)-Wikstromol; NSC 271296
NSC698802
8'-(R)-4,4',8-Trihydroxy-3,3'-dimethoxylignanolide
SCHEMBL874637
CHEBI:7639
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Nortrachelogenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9488 94.88%
Caco-2 + 0.5000 50.00%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability + 0.6000 60.00%
Subcellular localzation Mitochondria 0.8761 87.61%
OATP2B1 inhibitior - 0.8578 85.78%
OATP1B1 inhibitior + 0.9534 95.34%
OATP1B3 inhibitior + 0.9248 92.48%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.5672 56.72%
P-glycoprotein inhibitior - 0.4546 45.46%
P-glycoprotein substrate - 0.7667 76.67%
CYP3A4 substrate + 0.5603 56.03%
CYP2C9 substrate - 0.6050 60.50%
CYP2D6 substrate - 0.7355 73.55%
CYP3A4 inhibition - 0.6122 61.22%
CYP2C9 inhibition - 0.6347 63.47%
CYP2C19 inhibition - 0.5940 59.40%
CYP2D6 inhibition - 0.9120 91.20%
CYP1A2 inhibition - 0.6277 62.77%
CYP2C8 inhibition + 0.5063 50.63%
CYP inhibitory promiscuity - 0.6084 60.84%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6091 60.91%
Eye corrosion - 0.9921 99.21%
Eye irritation - 0.8485 84.85%
Skin irritation - 0.8351 83.51%
Skin corrosion - 0.9622 96.22%
Ames mutagenesis + 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4665 46.65%
Micronuclear + 0.5166 51.66%
Hepatotoxicity + 0.5677 56.77%
skin sensitisation - 0.8530 85.30%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.6862 68.62%
Acute Oral Toxicity (c) III 0.5297 52.97%
Estrogen receptor binding + 0.9090 90.90%
Androgen receptor binding + 0.6078 60.78%
Thyroid receptor binding + 0.7403 74.03%
Glucocorticoid receptor binding + 0.6766 67.66%
Aromatase binding + 0.5355 53.55%
PPAR gamma + 0.6049 60.49%
Honey bee toxicity - 0.8852 88.52%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.9731 97.31%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.06% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.99% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.49% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.36% 85.14%
CHEMBL2581 P07339 Cathepsin D 93.78% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 91.97% 94.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 91.71% 92.62%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.91% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.34% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.85% 95.89%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.47% 99.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.58% 97.25%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.54% 89.00%
CHEMBL2535 P11166 Glucose transporter 80.83% 98.75%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Acacia simplicifolia
Adenia fruticosa
Alcea rosea
Alpinia roxburghii
Aristolochia triangularis
Artemisia alpina
Balanops australiana
Bowdichia virgilioides
Brandegea bigelovii
Breonia chinensis
Bupleurum falcatum
Bupleurum salicifolium
Campylotropis hirtella
Cedrus deodara
Centaurea zuccariniana
Ceropegia dichotoma
Chamaecyparis formosensis
Corydalis gigantea
Cousinia canescens
Crinum moorei
Crotalaria candicans
Cryptomeria japonica
Davallia perdurans
Dendrobium loddigesii
Didymochlaena truncatula
Distephanus angulifolius
Echinochloa esculenta
Eucalyptus apodophylla
Euonymus tingens
Euphorbia cornigera
Firmiana simplex
Galium album
Glycosmis macrophylla
Gomphostemma crinitum
Gonzalezia decurrens
Gypsophila perfoliata
Hopea brevipetiolaris
Hylocomium splendens
Hypericum polyanthemum
Juniperus drupacea
Juniperus rigida
Kokoona reflexa
Lophostemon confertus
Maesa ramentacea
Maharanga bicolor
Mentha × gentilis
Millettia laurentii
Millettia rubiginosa
Monodora tenuifolia
Mosla japonica
Nauclea parva
Neoorthocaulis floerkei
Ocimum tenuiflorum
Ononis spinosa
Orbivestus karaguensis
Osteospermum hyoseroides
Passerina corymbosa
Pentaclethra macrophylla
Periploca sepium
Pinalia japonica
Pinus massoniana
Pinus strobus
Pinus sylvestris
Plagiomnium undulatum
Plectranthus hereroensis
Pluchea odorata
Podophyllum delavayi
Pterocaulon virgatum
Rhodiola semenovii
Rubus chamaemorus
Rubus phoenicolasius
Salacia lehmbachii
Salvia sessei
Salvia yosgadensis
Saussurea pulchella
Sedum cepaea
Sideritis brevibracteata
Sideroxylon cubense
Solidago ptarmicoides
Sonneratia caseolaris
Stephania zippeliana
Symplocos glauca
Taiwania cryptomerioides
Taxus cuspidata
Taxus mairei
Teucrium scorodonia
Thuja occidentalis
Tinospora hainanensis
Titanotrichum oldhamii
Trachelospermum asiaticum
Trachelospermum axillare
Trachelospermum jasminoides
Urbanodendron verrucosum
Uvaria littoralis
Veronica anagallis
Veronica polita
Waitzia acuminata
Wikstroemia hainanensis
Wikstroemia indica
Wrightia tinctoria

Cross-Links

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PubChem 394846
NPASS NPC33090
LOTUS LTS0179270
wikiData Q105299746