Baicalein

Details

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Internal ID ed2c5ef7-f10a-4ed1-a08f-75f57572562e
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavones
IUPAC Name 5,6,7-trihydroxy-2-phenylchromen-4-one
SMILES (Canonical) C1=CC=C(C=C1)C2=CC(=O)C3=C(O2)C=C(C(=C3O)O)O
SMILES (Isomeric) C1=CC=C(C=C1)C2=CC(=O)C3=C(O2)C=C(C(=C3O)O)O
InChI InChI=1S/C15H10O5/c16-9-6-11(8-4-2-1-3-5-8)20-12-7-10(17)14(18)15(19)13(9)12/h1-7,17-19H
InChI Key FXNFHKRTJBSTCS-UHFFFAOYSA-N
Popularity 3,305 references in papers

Physical and Chemical Properties

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Molecular Formula C15H10O5
Molecular Weight 270.24 g/mol
Exact Mass 270.05282342 g/mol
Topological Polar Surface Area (TPSA) 87.00 Ų
XlogP 1.70
Atomic LogP (AlogP) 2.58
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 1

Synonyms

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491-67-8
5,6,7-Trihydroxyflavone
Noroxylin
5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one
Biacalein
BaiKalein
5,6,7-trihydroxy-2-phenylchromen-4-one
Baicelein
5,6,7-trihydroxy-2-phenyl-chromen-4-one
MFCD00017459
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Baicalein

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9071 90.71%
Caco-2 - 0.9372 93.72%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability + 0.6714 67.14%
Subcellular localzation Mitochondria 0.5892 58.92%
OATP2B1 inhibitior - 0.5665 56.65%
OATP1B1 inhibitior + 0.9505 95.05%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior + 0.6600 66.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.8558 85.58%
P-glycoprotein inhibitior - 0.7133 71.33%
P-glycoprotein substrate - 0.9700 97.00%
CYP3A4 substrate - 0.5997 59.97%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8553 85.53%
CYP3A4 inhibition + 0.6951 69.51%
CYP2C9 inhibition - 0.5823 58.23%
CYP2C19 inhibition - 0.9025 90.25%
CYP2D6 inhibition - 0.9287 92.87%
CYP1A2 inhibition + 0.9106 91.06%
CYP2C8 inhibition + 0.5678 56.78%
CYP inhibitory promiscuity + 0.5822 58.22%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6750 67.50%
Eye corrosion - 0.9905 99.05%
Eye irritation + 0.9628 96.28%
Skin irritation + 0.5835 58.35%
Skin corrosion - 0.9397 93.97%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8465 84.65%
Micronuclear + 0.9300 93.00%
Hepatotoxicity - 0.6000 60.00%
skin sensitisation - 0.7447 74.47%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.8449 84.49%
Acute Oral Toxicity (c) II 0.7348 73.48%
Estrogen receptor binding + 0.9162 91.62%
Androgen receptor binding + 0.8992 89.92%
Thyroid receptor binding + 0.6775 67.75%
Glucocorticoid receptor binding + 0.9336 93.36%
Aromatase binding + 0.8824 88.24%
PPAR gamma + 0.9086 90.86%
Honey bee toxicity - 0.8822 88.22%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9124 91.24%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 3162.3 nM
7943.3 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL3577 P00352 Aldehyde dehydrogenase 1A1 14988.9 nM
11220.2 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL3687 P18054 Arachidonate 12-lipoxygenase 860 nM
IC50
PMID: 17869117
CHEMBL2903 P16050 Arachidonate 15-lipoxygenase 600 nM
9100 nM
Ki
IC50
via Super-PRED
PMID: 17869117
CHEMBL1293236 P46063 ATP-dependent DNA helicase Q1 5011.9 nM
28183.8 nM
15848.9 nM
Potency
Potency
Potency
via CMAUP
via CMAUP
via CMAUP
CHEMBL1293237 P54132 Bloom syndrome protein 15848.9 nM
6309.6 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL4096 P04637 Cellular tumor antigen p53 631 nM
3981.1 nM
631 nM
Potency
Potency
Potency
via CMAUP
via CMAUP
via Super-PRED
CHEMBL5587 P16220 Cyclic AMP-responsive element-binding protein 1 13500 nM
AC50
PMID: 18722769
CHEMBL308 P06493 Cyclin-dependent kinase 1 6530 nM
IC50
PMID: 18639462
CHEMBL2231 P04798 Cytochrome P450 1A1 1220 nM
Ki
PMID: 21482471
CHEMBL3356 P05177 Cytochrome P450 1A2 501.19 nM
AC50
via CMAUP
CHEMBL4878 Q16678 Cytochrome P450 1B1 260 nM
Ki
PMID: 21482471
CHEMBL3622 P33261 Cytochrome P450 2C19 5011.9 nM
Potency
via CMAUP
CHEMBL3397 P11712 Cytochrome P450 2C9 5011.9 nM
Potency
via CMAUP
CHEMBL289 P10635 Cytochrome P450 2D6 31622.8 nM
Potency
via CMAUP
CHEMBL340 P08684 Cytochrome P450 3A4 31622.8 nM
31622.8 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 631 nM
631 nM
Potency
Potency
via Super-PRED
via CMAUP
CHEMBL4159 Q99714 Endoplasmic reticulum-associated amyloid beta-peptide-binding protein 1995.3 nM
3981.1 nM
2511.9 nM
Potency
Potency
Potency
via CMAUP
via CMAUP
via CMAUP
CHEMBL6144 P43250 G protein-coupled receptor kinase 6 8700 nM
IC50
via CMAUP
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 28200 nM
IC50
PMID: 24900447
CHEMBL2424 Q04760 Glyoxalase I 11000 nM
IC50
PMID: 18258440
CHEMBL4331 P68871 Hemoglobin beta chain 31622.8 nM
Potency
via CMAUP
CHEMBL1287622 Q9Y468 Lethal(3)malignant brain tumor-like protein 1 15848.9 nM
Potency
via CMAUP
CHEMBL1293226 B2RXH2 Lysine-specific demethylase 4D-like 3000 nM
891.3 nM
3000 nM
IC50
Potency
IC50
DOI: 10.1039/C1MD00199J
via Super-PRED
PMID: 21596573
CHEMBL1293224 P10636 Microtubule-associated protein tau 10000 nM
19952.6 nM
28183.8 nM
19952.6 nM
25118.9 nM
7943.3 nM
10000 nM
17782.8 nM
15848.9 nM
Potency
Potency
Potency
Potency
Potency
Potency
Potency
Potency
Potency
via CMAUP
via CMAUP
via CMAUP
via CMAUP
via CMAUP
via CMAUP
via CMAUP
via CMAUP
via CMAUP
CHEMBL4302 P08183 P-glycoprotein 1 41000 nM
IC50
PMID: 15481991
CHEMBL3202 P48147 Prolyl endopeptidase 36000 nM
IC50
PMID: 18650094
CHEMBL2396508 Q13332 Receptor-type tyrosine-protein phosphatase S 10300 nM
IC50
PMID: 26602279
CHEMBL2748 P14410 Sucrase-isomaltase 52000 nM
35000 nM
IC50
IC50
PMID: 18255289
PMID: 9834167
CHEMBL1293232 Q16637 Survival motor neuron protein 12589.3 nM
Potency
via CMAUP
CHEMBL1947 P10828 Thyroid hormone receptor beta-1 44668.4 nM
44668.4 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL1293227 O75604 Ubiquitin carboxyl-terminal hydrolase 2 631 nM
631 nM
Potency
Potency
via Super-PRED
via CMAUP
CHEMBL1287617 P22309 UDP-glucuronosyltransferase 1-1 7000 nM
4400 nM
IC50
IC50
PMID: 21030469
PMID: 21030469
CHEMBL1929 P47989 Xanthine dehydrogenase 2790 nM
IC50
PMID: 9461655

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 95.41% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.39% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.20% 85.14%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 90.84% 99.15%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.79% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.21% 89.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 87.96% 95.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.83% 86.33%
CHEMBL3194 P02766 Transthyretin 83.92% 90.71%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 83.31% 83.57%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 82.31% 94.62%
CHEMBL3401 O75469 Pregnane X receptor 81.77% 94.73%

Cross-Links

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PubChem 5281605
NPASS NPC239312
ChEMBL CHEMBL8260
LOTUS LTS0214160
wikiData Q2879363