Geniposidic acid

Details

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Internal ID 0b2f09f3-7b10-4170-b383-1149bf4b5328
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name (1S,4aS,7aS)-7-(hydroxymethyl)-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid
SMILES (Canonical) C1C=C(C2C1C(=COC2OC3C(C(C(C(O3)CO)O)O)O)C(=O)O)CO
SMILES (Isomeric) C1C=C([C@@H]2[C@H]1C(=CO[C@H]2O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)C(=O)O)CO
InChI InChI=1S/C16H22O10/c17-3-6-1-2-7-8(14(22)23)5-24-15(10(6)7)26-16-13(21)12(20)11(19)9(4-18)25-16/h1,5,7,9-13,15-21H,2-4H2,(H,22,23)/t7-,9-,10-,11-,12+,13-,15+,16+/m1/s1
InChI Key ZJDOESGVOWAULF-OGJQONSISA-N
Popularity 76 references in papers

Physical and Chemical Properties

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Molecular Formula C16H22O10
Molecular Weight 374.34 g/mol
Exact Mass 374.12129689 g/mol
Topological Polar Surface Area (TPSA) 166.00 Ų
XlogP -2.70
Atomic LogP (AlogP) -2.32
H-Bond Acceptor 9
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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27741-01-1
CHEBI:5301
(1R,2S,6S)-9-(HYDROXYMETHYL)-2-[(2S,3R,4S,5S,6R)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)OXAN-2-YL]OXY-3-OXABICYCLO[4.3.0]NONA-4,8-DIENE-5-CARBOXYLIC ACID
(1S,4aS,7aS)-7-(hydroxymethyl)-1-(((2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylic acid
CHEMBL460031
Geniposidinsaure
geniposidic-acid
Premnosidic acid
Cyclopenta(c)pyran-4-carboxylic acid, 1-(beta-D-glucopyranosyloxy)-1,4a,5,7a-tetrahydro-7-(hydroxymethyl)-, (1S,4aS,7aS)-
Cyclopenta[c]pyran-4-carboxylic acid, 1-(beta-D-glucopyranosyloxy)-1,4a,5,7a-tetrahydro-7-(hydroxymethyl)-, (1S,4aS,7aS)-
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Geniposidic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5126 51.26%
Caco-2 - 0.9043 90.43%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7457 74.57%
OATP2B1 inhibitior - 0.8580 85.80%
OATP1B1 inhibitior + 0.7685 76.85%
OATP1B3 inhibitior + 0.9554 95.54%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.9400 94.00%
P-glycoprotein inhibitior - 0.9173 91.73%
P-glycoprotein substrate - 0.9117 91.17%
CYP3A4 substrate + 0.5278 52.78%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8723 87.23%
CYP3A4 inhibition - 0.9424 94.24%
CYP2C9 inhibition - 0.9368 93.68%
CYP2C19 inhibition - 0.8280 82.80%
CYP2D6 inhibition - 0.8957 89.57%
CYP1A2 inhibition - 0.8766 87.66%
CYP2C8 inhibition - 0.7629 76.29%
CYP inhibitory promiscuity - 0.8327 83.27%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7241 72.41%
Eye corrosion - 0.9872 98.72%
Eye irritation - 0.9176 91.76%
Skin irritation - 0.8107 81.07%
Skin corrosion - 0.9605 96.05%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6255 62.55%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.8214 82.14%
skin sensitisation - 0.8808 88.08%
Respiratory toxicity + 0.5333 53.33%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity + 0.6784 67.84%
Acute Oral Toxicity (c) IV 0.3602 36.02%
Estrogen receptor binding - 0.5724 57.24%
Androgen receptor binding + 0.5347 53.47%
Thyroid receptor binding - 0.5832 58.32%
Glucocorticoid receptor binding - 0.6360 63.60%
Aromatase binding + 0.6350 63.50%
PPAR gamma - 0.5073 50.73%
Honey bee toxicity - 0.8557 85.57%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity - 0.7550 75.50%
Fish aquatic toxicity + 0.8288 82.88%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.22% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.67% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.56% 97.09%
CHEMBL5255 O00206 Toll-like receptor 4 81.19% 92.50%
CHEMBL1811 P34995 Prostanoid EP1 receptor 80.15% 95.71%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 80.08% 94.62%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.02% 89.00%

Cross-Links

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PubChem 443354
NPASS NPC241911
LOTUS LTS0051067
wikiData Q5533206