Deoxypodophyllotoxin

Details

Top
Internal ID a10ddec5-7d08-4ca2-b373-32113bd69503
Taxonomy Lignans, neolignans and related compounds > Lignan lactones
IUPAC Name (5R,5aR,8aR)-5-(3,4,5-trimethoxyphenyl)-5a,8,8a,9-tetrahydro-5H-[2]benzofuro[5,6-f][1,3]benzodioxol-6-one
SMILES (Canonical) COC1=CC(=CC(=C1OC)OC)C2C3C(CC4=CC5=C(C=C24)OCO5)COC3=O
SMILES (Isomeric) COC1=CC(=CC(=C1OC)OC)[C@H]2[C@@H]3[C@@H](CC4=CC5=C(C=C24)OCO5)COC3=O
InChI InChI=1S/C22H22O7/c1-24-17-6-12(7-18(25-2)21(17)26-3)19-14-8-16-15(28-10-29-16)5-11(14)4-13-9-27-22(23)20(13)19/h5-8,13,19-20H,4,9-10H2,1-3H3/t13-,19+,20-/m0/s1
InChI Key ZGLXUQQMLLIKAN-SVIJTADQSA-N
Popularity 159 references in papers

Physical and Chemical Properties

Top
Molecular Formula C22H22O7
Molecular Weight 398.40 g/mol
Exact Mass 398.13655304 g/mol
Topological Polar Surface Area (TPSA) 72.40 Ų
XlogP 3.10
Atomic LogP (AlogP) 2.92
H-Bond Acceptor 7
H-Bond Donor 0
Rotatable Bonds 4

Synonyms

Top
19186-35-7
Anthricin
(-)-Deoxypodophyllotoxin
Desoxypodophyllotoxin
Silicicolin
4-Deoxypodophyllotoxin
(-)-Anthricin
Hernandin
Hernandion
(-)-Desoxypodophyllotoxin
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of Deoxypodophyllotoxin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9911 99.11%
Caco-2 + 0.8580 85.80%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.7177 71.77%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9216 92.16%
OATP1B3 inhibitior + 0.9697 96.97%
MATE1 inhibitior - 0.7400 74.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.9272 92.72%
P-glycoprotein inhibitior + 0.7094 70.94%
P-glycoprotein substrate - 0.9363 93.63%
CYP3A4 substrate + 0.6003 60.03%
CYP2C9 substrate + 0.5905 59.05%
CYP2D6 substrate - 0.7552 75.52%
CYP3A4 inhibition + 0.8745 87.45%
CYP2C9 inhibition + 0.9208 92.08%
CYP2C19 inhibition + 0.9535 95.35%
CYP2D6 inhibition - 0.7176 71.76%
CYP1A2 inhibition - 0.7567 75.67%
CYP2C8 inhibition - 0.6658 66.58%
CYP inhibitory promiscuity + 0.9347 93.47%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.3953 39.53%
Eye corrosion - 0.9837 98.37%
Eye irritation - 0.9016 90.16%
Skin irritation - 0.8279 82.79%
Skin corrosion - 0.9728 97.28%
Ames mutagenesis - 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3706 37.06%
Micronuclear + 0.7974 79.74%
Hepatotoxicity + 0.8125 81.25%
skin sensitisation - 0.6784 67.84%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.6333 63.33%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity + 0.8399 83.99%
Acute Oral Toxicity (c) III 0.6311 63.11%
Estrogen receptor binding + 0.8991 89.91%
Androgen receptor binding + 0.6921 69.21%
Thyroid receptor binding + 0.7880 78.80%
Glucocorticoid receptor binding + 0.8728 87.28%
Aromatase binding - 0.7060 70.60%
PPAR gamma + 0.6567 65.67%
Honey bee toxicity - 0.6993 69.93%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9680 96.80%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 98.46% 83.82%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.70% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.67% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.36% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.11% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.13% 95.56%
CHEMBL4247 Q9UM73 ALK tyrosine kinase receptor 92.01% 96.86%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.91% 89.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 90.31% 92.62%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 89.70% 96.77%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.43% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.04% 97.09%
CHEMBL5311 P37023 Serine/threonine-protein kinase receptor R3 85.67% 82.67%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.67% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.32% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 83.21% 97.14%
CHEMBL2581 P07339 Cathepsin D 83.12% 98.95%
CHEMBL4225 P49760 Dual specificity protein kinase CLK2 83.00% 80.96%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 81.32% 89.62%
CHEMBL2535 P11166 Glucose transporter 81.07% 98.75%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.35% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.30% 95.89%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 80.19% 94.80%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Aglaia meridionalis
Allium ursinum
Ammi majus
Anthriscus sylvestris
Arcangelisia gusanlung
Artemisia schmidtiana
Austrocedrus chilensis
Avena fatua
Brickellia pendula
Bridelia ferruginea
Bursera fagaroides
Bursera permollis
Callitris columellaris
Calocedrus decurrens
Campsis grandiflora
Chaerophyllum aureum
Chrysosplenium tetrandrum
Citrus deliciosa
Cladanthus scariosus
Cleidion brevipetiolatum
Condea verticillata
Copaifera paupera
Crotalaria spectabilis
Dimorphotheca sinuata
Endosamara racemosa
Entandrophragma cylindricum
Escallonia virgata
Ficus maxima
Galega officinalis
Gleichenia polypodioides
Helichrysum fulvum
Heptapleurum capitatum
Hernandia nymphaeifolia
Hernandia sonora
Hesperocyparis nevadensis
Hyptis tomentosa
Illigera luzonensis
Jacobaea erratica
Juniperus phoenicea
Juniperus rigida
Juniperus sabina
Juniperus thurifera
Juniperus virginiana var. silicicola
Lathyrus linifolius
Leptospermum scoparium
Libocedrus bidwillii
Linum album
Linum nodiflorum
Macrococculus pomiferus
Magnolia acuminata
Myodocarpus gracilis
Onoclea struthiopteris
Ophioglossum vulgatum
Piper sylvaticum
Platycladus orientalis
Plectranthus amboinicus
Plumbago europaea
Podolepis rugata
Podophyllum aurantiocaule
Podophyllum hexandrum
Podophyllum peltatum
Podophyllum pleianthum
Podophyllum versipelle
Polygala polygama
Pulsatilla cernua
Reissantia indica
Rhodanthe stricta
Roldana mexicana
Simmondsia chinensis
Tabebuia rosea
Tacca plantaginea
Tanacetum santolina
Tetraclinis articulata
Thuja occidentalis
Thujopsis dolabrata var. hondae
Timonius kaniensis

Cross-Links

Top
PubChem 345501
NPASS NPC80230
ChEMBL CHEMBL63970
LOTUS LTS0013249
wikiData Q27106380