trans,trans-Farnesol

Details

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Internal ID c94c7656-7f14-4216-b19f-231f9682f87a
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Sesquiterpenoids
IUPAC Name (2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ol
SMILES (Canonical) CC(=CCCC(=CCCC(=CCO)C)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CC/C(=C/CO)/C)/C)C
InChI InChI=1S/C15H26O/c1-13(2)7-5-8-14(3)9-6-10-15(4)11-12-16/h7,9,11,16H,5-6,8,10,12H2,1-4H3/b14-9+,15-11+
InChI Key CRDAMVZIKSXKFV-YFVJMOTDSA-N
Popularity 1,429 references in papers

Physical and Chemical Properties

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Molecular Formula C15H26O
Molecular Weight 222.37 g/mol
Exact Mass 222.198365449 g/mol
Topological Polar Surface Area (TPSA) 20.20 Ų
XlogP 4.80
Atomic LogP (AlogP) 4.40
H-Bond Acceptor 1
H-Bond Donor 1
Rotatable Bonds 7

Synonyms

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trans,trans-Farnesol
106-28-5
(E,E)-Farnesol
(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ol
4602-84-0
trans-Farnesol
(2E,6E)-Farnesol
2-trans,6-trans-Farnesol
All-trans-Farnesol
Farnesyl alcohol
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of trans,trans-Farnesol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9823 98.23%
Caco-2 + 0.9395 93.95%
Blood Brain Barrier + 0.9750 97.50%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Lysosomes 0.5576 55.76%
OATP2B1 inhibitior - 0.8517 85.17%
OATP1B1 inhibitior + 0.9449 94.49%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.6162 61.62%
P-glycoprotein inhibitior - 0.9566 95.66%
P-glycoprotein substrate - 0.9741 97.41%
CYP3A4 substrate - 0.6422 64.22%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7450 74.50%
CYP3A4 inhibition - 0.9088 90.88%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9026 90.26%
CYP2D6 inhibition - 0.9230 92.30%
CYP1A2 inhibition - 0.9046 90.46%
CYP2C8 inhibition - 0.9772 97.72%
CYP inhibitory promiscuity - 0.7650 76.50%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.6600 66.00%
Carcinogenicity (trinary) Non-required 0.6507 65.07%
Eye corrosion + 0.5325 53.25%
Eye irritation + 0.8851 88.51%
Skin irritation + 0.8492 84.92%
Skin corrosion - 0.9100 91.00%
Ames mutagenesis - 0.9000 90.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4749 47.49%
Micronuclear - 1.0000 100.00%
Hepatotoxicity - 0.9375 93.75%
skin sensitisation + 0.9333 93.33%
Respiratory toxicity - 0.9667 96.67%
Reproductive toxicity - 0.9812 98.12%
Mitochondrial toxicity - 0.9250 92.50%
Nephrotoxicity + 0.6319 63.19%
Acute Oral Toxicity (c) III 0.8552 85.52%
Estrogen receptor binding - 0.8886 88.86%
Androgen receptor binding - 0.8384 83.84%
Thyroid receptor binding - 0.7654 76.54%
Glucocorticoid receptor binding - 0.6535 65.35%
Aromatase binding - 0.7305 73.05%
PPAR gamma + 0.6073 60.73%
Honey bee toxicity - 0.9445 94.45%
Biodegradation - 0.5000 50.00%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.9500 95.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL2903 P16050 Arachidonate 15-lipoxygenase 15848.9 nM
Potency
via CMAUP
CHEMBL340 P08684 Cytochrome P450 3A4 12589.3 nM
12589.3 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL1293224 P10636 Microtubule-associated protein tau 14125.4 nM
Potency
via CMAUP
CHEMBL1287617 P22309 UDP-glucuronosyltransferase 1-1 40000 nM
47000 nM
IC50
IC50
PMID: 21030469
PMID: 21030469

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 94.25% 92.08%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 84.82% 96.09%
CHEMBL2581 P07339 Cathepsin D 82.45% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 81.91% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.90% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Abies firma
Acacia aulacocarpa
Acokanthera oblongifolia
Agnorhiza bolanderi
Anaxagorea crassipetala
Anemonastrum flaccidum
Anodendron affine
Araujia sericifera
Ardisia neriifolia
Arnica nevadensis
Artemisia gmelinii
Aspidosperma subincanum
Beyeria sulcata var. brevipes
Bursaria spinosa
Cedrela salvadorensis
Chimonanthus praecox
Chloranthus tianmushanensis
Chromolaena odorata
Chromolaena pulchella
Chrysanthemum indicum
Citrus × aurantium
Citrus maxima
Coluria geoides
Conocephalum conicum
Craibia grandiflora
Cryptocarya aschersoniana
Curcuma longa
Dendrosenecio kilimanjari
Descurainia sophia
Dipterocarpus alatus
Drosera peltata
Echinops amplexicaulis
Elettaria cardamomum
Eriobotrya japonica
Eucommia ulmoides
Eupatorium argentinum
Ficus formosana
Galium latoramosum
Garcinia gummi-gutta
Garcinia madruno
Gardenia fosbergii
Ginkgo biloba
Guatteria ucayalina
Hertia cheirifolia
Ilex affinis
Isodon umbrosus
Juniperus brevifolia
Juniperus communis
Kaempferia pulchra
Lantana camara
Licaria chrysophylla
Lindera aggregata
Litogyne gariepina
Lonicera japonica
Melaleuca leucadendra
Mentha arvensis
Mentha canadensis
Mentha spicata
Nelumbo nucifera
Nicotiana alata
Odixia angusta
Ormosia hosiei
Ornithoglossum viride
Panax ginseng
Panax notoginseng
Peritassa compta
Petasites radiatus
Pinus densiflora
Prosopis glandulosa
Prunus laurocerasus
Psiadia dentata
Pteris plumieri
Quercus cerris
Rudbeckia mollis
Salvia officinalis
Schisandra chinensis
Schizanthus tricolor
Senecio squalidus
Seriphidium cinum
Sesbania punicea
Simira eliezeriana
Sorbus pallescens
Sphaeranthus confertifolius
Stenostomum lucidum
Tagetes lucida
Taxodium huegelii
Torreya nucifera
Vitex madiensis
Zanthoxylum zanthoxyloides
Zea mays
Zingiber officinale

Cross-Links

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PubChem 445070
NPASS NPC103213
ChEMBL CHEMBL25308
LOTUS LTS0209244
wikiData Q420449