Koparin

Details

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Internal ID f738c6f1-92b5-42f4-841b-20635fc35c72
Taxonomy Phenylpropanoids and polyketides > Isoflavonoids > O-methylated isoflavonoids > 4-O-methylated isoflavonoids > 3-hydroxy,4-methoxyisoflavonoids
IUPAC Name 3-(2,3-dihydroxy-4-methoxyphenyl)-7-hydroxychromen-4-one
SMILES (Canonical) COC1=C(C(=C(C=C1)C2=COC3=C(C2=O)C=CC(=C3)O)O)O
SMILES (Isomeric) COC1=C(C(=C(C=C1)C2=COC3=C(C2=O)C=CC(=C3)O)O)O
InChI InChI=1S/C16H12O6/c1-21-12-5-4-9(15(19)16(12)20)11-7-22-13-6-8(17)2-3-10(13)14(11)18/h2-7,17,19-20H,1H3
InChI Key SMOFGXHPWCTYQD-UHFFFAOYSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C16H12O6
Molecular Weight 300.26 g/mol
Exact Mass 300.06338810 g/mol
Topological Polar Surface Area (TPSA) 96.20 Ų
XlogP 2.10
Atomic LogP (AlogP) 2.59
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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65048-75-1
3-(2,3-dihydroxy-4-methoxyphenyl)-7-hydroxy-4H-chromen-4-one
Spectrum2_000299
SPECTRUM200422
SPBio_000238
SCHEMBL5723673
CHEMBL1354502
DTXSID401341627
CCG-39857
LMPK12050086
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Koparin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9577 95.77%
Caco-2 + 0.6799 67.99%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability + 0.6571 65.71%
Subcellular localzation Mitochondria 0.7944 79.44%
OATP2B1 inhibitior - 0.5595 55.95%
OATP1B1 inhibitior + 0.9414 94.14%
OATP1B3 inhibitior + 0.9965 99.65%
MATE1 inhibitior - 0.7600 76.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.8106 81.06%
P-glycoprotein inhibitior - 0.8157 81.57%
P-glycoprotein substrate - 0.6663 66.63%
CYP3A4 substrate + 0.6144 61.44%
CYP2C9 substrate - 0.8397 83.97%
CYP2D6 substrate - 0.7876 78.76%
CYP3A4 inhibition - 0.7179 71.79%
CYP2C9 inhibition + 0.5494 54.94%
CYP2C19 inhibition + 0.6827 68.27%
CYP2D6 inhibition - 0.9018 90.18%
CYP1A2 inhibition + 0.9263 92.63%
CYP2C8 inhibition + 0.6221 62.21%
CYP inhibitory promiscuity + 0.6056 60.56%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5596 55.96%
Eye corrosion - 0.9766 97.66%
Eye irritation + 0.5968 59.68%
Skin irritation - 0.5899 58.99%
Skin corrosion - 0.9443 94.43%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8419 84.19%
Micronuclear + 0.9100 91.00%
Hepatotoxicity + 0.6125 61.25%
skin sensitisation - 0.9318 93.18%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity + 0.5330 53.30%
Acute Oral Toxicity (c) III 0.6733 67.33%
Estrogen receptor binding + 0.9329 93.29%
Androgen receptor binding + 0.8889 88.89%
Thyroid receptor binding + 0.6559 65.59%
Glucocorticoid receptor binding + 0.8353 83.53%
Aromatase binding + 0.8281 82.81%
PPAR gamma + 0.5228 52.28%
Honey bee toxicity - 0.8897 88.97%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5249 52.49%
Fish aquatic toxicity + 0.8838 88.38%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 7079.5 nM
Potency
via CMAUP
CHEMBL3577 P00352 Aldehyde dehydrogenase 1A1 8912.5 nM
Potency
via CMAUP
CHEMBL2903 P16050 Arachidonate 15-lipoxygenase 12589.3 nM
Potency
via CMAUP
CHEMBL1293236 P46063 ATP-dependent DNA helicase Q1 3981.1 nM
Potency
via CMAUP
CHEMBL4159 Q99714 Endoplasmic reticulum-associated amyloid beta-peptide-binding protein 15848.9 nM
Potency
via CMAUP
CHEMBL1293226 B2RXH2 Lysine-specific demethylase 4D-like 11220.2 nM
Potency
via CMAUP
CHEMBL1293224 P10636 Microtubule-associated protein tau 15848.9 nM
10000 nM
12589.3 nM
Potency
Potency
Potency
via CMAUP
via CMAUP
via CMAUP
CHEMBL1075138 Q9NUW8 Tyrosyl-DNA phosphodiesterase 1 1000 nM
Potency
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.73% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.69% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.51% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.27% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.66% 89.00%
CHEMBL2002 P12268 Inosine-5'-monophosphate dehydrogenase 2 91.44% 98.21%
CHEMBL1255126 O15151 Protein Mdm4 90.50% 90.20%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.74% 94.00%
CHEMBL2535 P11166 Glucose transporter 88.82% 98.75%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.43% 99.17%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.41% 99.23%
CHEMBL1951 P21397 Monoamine oxidase A 80.88% 91.49%

Cross-Links

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PubChem 5318834
NPASS NPC195763
ChEMBL CHEMBL1354502
LOTUS LTS0195070
wikiData Q105256047