Gardenin B

Details

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Internal ID b41abfa7-8f76-4e7f-bd00-49e4a4873929
Taxonomy Phenylpropanoids and polyketides > Flavonoids > O-methylated flavonoids > 8-O-methylated flavonoids
IUPAC Name 5-hydroxy-6,7,8-trimethoxy-2-(4-methoxyphenyl)chromen-4-one
SMILES (Canonical) COC1=CC=C(C=C1)C2=CC(=O)C3=C(C(=C(C(=C3O2)OC)OC)OC)O
SMILES (Isomeric) COC1=CC=C(C=C1)C2=CC(=O)C3=C(C(=C(C(=C3O2)OC)OC)OC)O
InChI InChI=1S/C19H18O7/c1-22-11-7-5-10(6-8-11)13-9-12(20)14-15(21)17(23-2)19(25-4)18(24-3)16(14)26-13/h5-9,21H,1-4H3
InChI Key LXEVSYZNYDZSOB-UHFFFAOYSA-N
Popularity 45 references in papers

Physical and Chemical Properties

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Molecular Formula C19H18O7
Molecular Weight 358.30 g/mol
Exact Mass 358.10525291 g/mol
Topological Polar Surface Area (TPSA) 83.40 Ų
XlogP 3.30
Atomic LogP (AlogP) 3.20
H-Bond Acceptor 7
H-Bond Donor 1
Rotatable Bonds 5

Synonyms

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2798-20-1
Demethyltangeretin
5-demethyltangeretin
5-Hydroxy-4',6,7,8-tetramethoxyflavone
5-hydroxy-6,7,8-trimethoxy-2-(4-methoxyphenyl)chromen-4-one
CHEBI:79628
UNII-313E89KN5E
MLS002701917
313E89KN5E
NSC79093
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Gardenin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9823 98.23%
Caco-2 + 0.8596 85.96%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.7745 77.45%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8736 87.36%
OATP1B3 inhibitior + 0.9817 98.17%
MATE1 inhibitior + 0.5400 54.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.6797 67.97%
P-glycoprotein inhibitior + 0.9132 91.32%
P-glycoprotein substrate - 0.9243 92.43%
CYP3A4 substrate + 0.5203 52.03%
CYP2C9 substrate - 0.6401 64.01%
CYP2D6 substrate - 0.8296 82.96%
CYP3A4 inhibition - 0.5748 57.48%
CYP2C9 inhibition - 0.8861 88.61%
CYP2C19 inhibition + 0.5778 57.78%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition + 0.8530 85.30%
CYP2C8 inhibition + 0.5739 57.39%
CYP inhibitory promiscuity + 0.6103 61.03%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5716 57.16%
Eye corrosion - 0.9793 97.93%
Eye irritation - 0.6516 65.16%
Skin irritation - 0.7150 71.50%
Skin corrosion - 0.9836 98.36%
Ames mutagenesis - 0.5364 53.64%
Human Ether-a-go-go-Related Gene inhibition + 0.6668 66.68%
Micronuclear + 0.8359 83.59%
Hepatotoxicity - 0.7500 75.00%
skin sensitisation - 0.9504 95.04%
Respiratory toxicity - 0.6444 64.44%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.8180 81.80%
Acute Oral Toxicity (c) II 0.4982 49.82%
Estrogen receptor binding + 0.8909 89.09%
Androgen receptor binding + 0.9093 90.93%
Thyroid receptor binding + 0.7126 71.26%
Glucocorticoid receptor binding + 0.8097 80.97%
Aromatase binding + 0.7234 72.34%
PPAR gamma + 0.7476 74.76%
Honey bee toxicity - 0.9006 90.06%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.8902 89.02%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL3577 P00352 Aldehyde dehydrogenase 1A1 112.2 nM
112.2 nM
Potency
Potency
via Super-PRED
via CMAUP
CHEMBL4040 P28482 MAP kinase ERK2 10000 nM
Potency
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.74% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 97.11% 94.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 94.88% 99.15%
CHEMBL2581 P07339 Cathepsin D 93.22% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.43% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.35% 86.33%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 88.86% 83.57%
CHEMBL3192 Q9BY41 Histone deacetylase 8 88.51% 93.99%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.16% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.77% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.75% 85.14%
CHEMBL3401 O75469 Pregnane X receptor 86.21% 94.73%
CHEMBL1907 P15144 Aminopeptidase N 84.91% 93.31%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 84.67% 81.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.22% 99.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.59% 86.92%
CHEMBL4208 P20618 Proteasome component C5 81.92% 90.00%
CHEMBL5284 Q96RR4 CaM-kinase kinase beta 80.48% 89.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Agnorhiza bolanderi
Ammopiptanthus mongolicus
Anaxagorea crassipetala
Araujia sericifera
Arnebia ugamensis
Arnica nevadensis
Artemisia gmelinii
Baccharis grisebachii
Bauhinia racemosa
Beyeria sulcata var. brevipes
Biebersteinia orphanidis
Bursaria spinosa
Chloranthus tianmushanensis
Chromolaena odorata
Chromolaena pulchella
Citrus × aurantium
Citrus deliciosa
Citrus japonica
Clausena lenis
Condea albida
Craibia grandiflora
Dendrosenecio kilimanjari
Dipterocarpus alatus
Drosera peltata
Echinops amplexicaulis
Ficus formosana
Gamochaeta malvinensis
Gardenia fosbergii
Gardenia resinifera
Godmania aesculifolia
Hyptis tomentosa
Ilex affinis
Isodon umbrosus
Kaempferia pulchra
Launaea arborescens
Limnophila geoffrayi
Litogyne gariepina
Mentha × piperita
Mentha aquatica
Mentha arvensis
Mentha canadensis
Montanoa leucantha
Ocimum basilicum
Odixia angusta
Ononis natrix
Peltostigma guatemalense
Piptanthus nepalensis
Polygala chinensis
Prosopis glandulosa
Prunus laurocerasus
Pseudognaphalium affine
Pteris plumieri
Quercus cerris
Reichardia gaditana
Rhamnus japonica
Salvia mirzayanii
Salvia officinalis
Salvia palaefolia
Scutellaria caucasica
Senecio squalidus
Seriphidium cinum
Sesbania punicea
Sideritis × angustifolia
Sideritis jahandiezii
Sideritis tragoriganum
Simira eliezeriana
Soehrensia spachiana
Sorbus pallescens
Stenostomum lucidum
Tamarix dioica
Taxodium huegelii
Vitex madiensis

Cross-Links

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PubChem 96539
NPASS NPC176775
ChEMBL CHEMBL226512
LOTUS LTS0017705
wikiData Q27148750