Dimethylfraxetin

Details

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Internal ID 9a3990df-f9dd-4b85-b9ec-74ec07ada303
Taxonomy Phenylpropanoids and polyketides > Coumarins and derivatives
IUPAC Name 6,7,8-trimethoxychromen-2-one
SMILES (Canonical) COC1=C(C(=C2C(=C1)C=CC(=O)O2)OC)OC
SMILES (Isomeric) COC1=C(C(=C2C(=C1)C=CC(=O)O2)OC)OC
InChI InChI=1S/C12H12O5/c1-14-8-6-7-4-5-9(13)17-10(7)12(16-3)11(8)15-2/h4-6H,1-3H3
InChI Key RAYQKHLZHPFYEJ-UHFFFAOYSA-N
Popularity 36 references in papers

Physical and Chemical Properties

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Molecular Formula C12H12O5
Molecular Weight 236.22 g/mol
Exact Mass 236.06847348 g/mol
Topological Polar Surface Area (TPSA) 54.00 Ų
XlogP 1.80
Atomic LogP (AlogP) 1.82
H-Bond Acceptor 5
H-Bond Donor 0
Rotatable Bonds 3

Synonyms

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6,7,8-Trimethoxycoumarin
6035-49-0
Fraxidin Methyl Ether
6,7,8-trimethoxychromen-2-one
Fraxetin dimethyl ether
6,7,8,-trimethoxycoumarin
CHEMBL253551
2H-1-Benzopyran-2-one, 6,7,8-trimethoxy-
2H-Benzopyran-2-one, 6,7,8-trimethoxy-
6,7,8-Trimethoxy-2H-chromen-2-one
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Dimethylfraxetin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9778 97.78%
Caco-2 + 0.6946 69.46%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability + 0.5857 58.57%
Subcellular localzation Mitochondria 0.5544 55.44%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9629 96.29%
OATP1B3 inhibitior + 0.9871 98.71%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior - 0.6514 65.14%
P-glycoprotein inhibitior - 0.8471 84.71%
P-glycoprotein substrate - 0.9670 96.70%
CYP3A4 substrate - 0.6914 69.14%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8151 81.51%
CYP3A4 inhibition - 0.7454 74.54%
CYP2C9 inhibition - 0.9737 97.37%
CYP2C19 inhibition - 0.7451 74.51%
CYP2D6 inhibition - 0.9474 94.74%
CYP1A2 inhibition + 0.9739 97.39%
CYP2C8 inhibition - 0.7565 75.65%
CYP inhibitory promiscuity + 0.5630 56.30%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5630 56.30%
Eye corrosion - 0.9453 94.53%
Eye irritation + 0.8051 80.51%
Skin irritation - 0.7493 74.93%
Skin corrosion - 0.9882 98.82%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4483 44.83%
Micronuclear + 0.7859 78.59%
Hepatotoxicity + 0.7375 73.75%
skin sensitisation - 0.9398 93.98%
Respiratory toxicity - 0.7000 70.00%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.6108 61.08%
Acute Oral Toxicity (c) II 0.7769 77.69%
Estrogen receptor binding + 0.8076 80.76%
Androgen receptor binding + 0.6311 63.11%
Thyroid receptor binding - 0.6455 64.55%
Glucocorticoid receptor binding - 0.5000 50.00%
Aromatase binding + 0.7491 74.91%
PPAR gamma - 0.6380 63.80%
Honey bee toxicity - 0.9276 92.76%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9412 94.12%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 25118.9 nM
Potency
via CMAUP
CHEMBL3577 P00352 Aldehyde dehydrogenase 1A1 35481.3 nM
Potency
via CMAUP
CHEMBL261 P00915 Carbonic anhydrase I 9.7 nM
9.7 nM
Ki
Ki
PMID: 22892213
via Super-PRED
CHEMBL3594 Q16790 Carbonic anhydrase IX 6580 nM
Ki
PMID: 22892213
CHEMBL2326 P43166 Carbonic anhydrase VII 9280 nM
Ki
PMID: 22892213
CHEMBL3242 O43570 Carbonic anhydrase XII 18200 nM
Ki
PMID: 22892213
CHEMBL3912 Q8N1Q1 Carbonic anhydrase XIII 4240 nM
Ki
PMID: 22892213
CHEMBL4159 Q99714 Endoplasmic reticulum-associated amyloid beta-peptide-binding protein 25118.9 nM
Potency
via CMAUP
CHEMBL1293226 B2RXH2 Lysine-specific demethylase 4D-like 25118.9 nM
Potency
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.50% 94.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.65% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 89.97% 91.11%
CHEMBL4306 P22460 Voltage-gated potassium channel subunit Kv1.5 85.27% 94.03%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.62% 86.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.81% 96.00%
CHEMBL2581 P07339 Cathepsin D 82.64% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 81.44% 94.73%
CHEMBL2535 P11166 Glucose transporter 81.01% 98.75%
CHEMBL3192 Q9BY41 Histone deacetylase 8 80.91% 93.99%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.12% 99.23%

Cross-Links

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PubChem 3083928
NPASS NPC244799
ChEMBL CHEMBL253551
LOTUS LTS0005026
wikiData Q27164894