(2R,5R)-2-(6-aminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol

Details

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Internal ID 8cbf5037-e177-4282-862d-7fd74ec7f4a8
Taxonomy Nucleosides, nucleotides, and analogues > Purine nucleosides
IUPAC Name (2R,5R)-2-(6-aminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol
SMILES (Canonical) C1=NC(=C2C(=N1)N(C=N2)C3C(C(C(O3)CO)O)O)N
SMILES (Isomeric) C1=NC(=C2C(=N1)N(C=N2)[C@H]3C(C([C@H](O3)CO)O)O)N
InChI InChI=1S/C10H13N5O4/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(18)6(17)4(1-16)19-10/h2-4,6-7,10,16-18H,1H2,(H2,11,12,13)/t4-,6?,7?,10-/m1/s1
InChI Key OIRDTQYFTABQOQ-DGPXGRDGSA-N
Popularity 63 references in papers

Physical and Chemical Properties

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Molecular Formula C10H13N5O4
Molecular Weight 267.24 g/mol
Exact Mass 267.09675391 g/mol
Topological Polar Surface Area (TPSA) 140.00 Ų
XlogP -1.10
Atomic LogP (AlogP) -1.98
H-Bond Acceptor 9
H-Bond Donor 4
Rotatable Bonds 2

Synonyms

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AKOS015960342
AC-5504

2D Structure

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2D Structure of (2R,5R)-2-(6-aminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6454 64.54%
Caco-2 - 0.9373 93.73%
Blood Brain Barrier + 0.7500 75.00%
Human oral bioavailability - 0.9429 94.29%
Subcellular localzation Nucleus 0.4394 43.94%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9590 95.90%
OATP1B3 inhibitior + 0.9512 95.12%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior - 0.9555 95.55%
P-glycoprotein inhibitior - 0.9229 92.29%
P-glycoprotein substrate - 0.8999 89.99%
CYP3A4 substrate - 0.6259 62.59%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8703 87.03%
CYP3A4 inhibition - 0.9620 96.20%
CYP2C9 inhibition - 0.9595 95.95%
CYP2C19 inhibition - 0.9514 95.14%
CYP2D6 inhibition - 0.9770 97.70%
CYP1A2 inhibition - 0.9667 96.67%
CYP2C8 inhibition - 0.8783 87.83%
CYP inhibitory promiscuity - 0.9701 97.01%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5680 56.80%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.9280 92.80%
Skin irritation - 0.7595 75.95%
Skin corrosion - 0.9377 93.77%
Ames mutagenesis - 0.8491 84.91%
Human Ether-a-go-go-Related Gene inhibition - 0.6454 64.54%
Micronuclear + 1.0000 100.00%
Hepatotoxicity - 0.8235 82.35%
skin sensitisation - 0.8606 86.06%
Respiratory toxicity + 0.9667 96.67%
Reproductive toxicity + 0.9889 98.89%
Mitochondrial toxicity + 0.9750 97.50%
Nephrotoxicity - 0.8236 82.36%
Acute Oral Toxicity (c) III 0.7890 78.90%
Estrogen receptor binding - 0.5890 58.90%
Androgen receptor binding + 0.6240 62.40%
Thyroid receptor binding + 0.5830 58.30%
Glucocorticoid receptor binding + 0.5472 54.72%
Aromatase binding + 0.8260 82.60%
PPAR gamma + 0.7051 70.51%
Honey bee toxicity - 0.9226 92.26%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity - 0.9143 91.43%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL226 P30542 Adenosine A1 receptor 2.344 nM
IC50
via Super-PRED
CHEMBL251 P29274 Adenosine A2a receptor 700 nM
EC50
via Super-PRED
CHEMBL256 P0DMS8 Adenosine A3 receptor 1.148 nM
IC50
via Super-PRED
CHEMBL284 P27487 Dipeptidyl peptidase IV 62 nM
IC50
via Super-PRED
CHEMBL5401 P42226 Signal transducer and activator of transcription 6 0.03162 nM
Potency
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3589 P55263 Adenosine kinase 98.93% 98.05%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.71% 96.09%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 95.34% 100.00%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 90.74% 80.33%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 90.27% 96.67%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 89.33% 95.48%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 87.04% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.36% 94.00%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 84.35% 98.46%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.43% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.13% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 82.01% 94.73%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.74% 95.89%
CHEMBL5678 P34947 G protein-coupled receptor kinase 5 80.47% 88.00%

Cross-Links

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PubChem 54732806
NPASS NPC2499