Viola hondoensis
Details Top
| Internal ID | UUID64404fb2d896b805985435 |
| Scientific name | Viola hondoensis |
| Authority | W.Becker & Boissieu |
| First published in | Bull. Herb. Boissier , sér. 2, 8: 739 (1908) |
General Uses Top
Suggest a correction!Scientific/model organism uses:
Recent genome sequencing of Viola hondoensis has established it as a genomic reference for the genus Viola (Violaceae), with a high-quality chromosome-level assembly deposited in public databases (e.g., NCBI). The resource supports comparative genomics, phylogenomics, and trait evolution studies across Violaceae, and serves as a reference for community genomics data, including environmental DNA and transcriptomic datasets (e.g., JGI Phytozome, NCBI SRA/DDBJ).
Properties relevant to use:
The assembled genome (diploid, n≈10; 1C≈0.65–0.75 pg) and associated genome annotation enable comparative analyses of gene families associated with floral development, secondary metabolism (including anthocyanins and scent compounds), and stress response. These resources support functional and evolutionary studies but do not directly imply commercial or industrial applications.
Standards and regulation:
No industry-specific standards for the plant’s materials were identified. Genomic data adhere to standard bioinformatics repositories and metadata conventions (e.g., NCBI BioProject and BioSample).
Sustainability and sourcing:
Populations are distributed in Japan (Honshu, Shikoku, Kyushu). Genomic resources enable non-destructive sampling strategies and help inform conservation assessments, though commercial harvesting is not documented.
Common names Top
Add a new one! Suggest a correction!| Language | Common/alternative name |
|---|---|
| Japanese | アオイスミレ |
| Chinese | 日本球果堇菜 |
| Chinese | 本岛球果堇菜 |
Germination/Propagation Top
Suggest a correction or add new data!| Sow at 4°C for 3 weeks, then increase to 20°C. |
| Sow seeds immediately as their viability decreases rapidly, or they best germinate when fresh. If stored, seeds might need temperature cycling and patience to germinate. |
Distribution (via POWO/KEW) Top
Legend for the distribution data:
- Doubtful data
- Extinct
- Introduced
- Native
-
Asia-temperate click to expand
-
China
- China South-central
- China Southeast
-
Eastern Asia
- Japan
- Korea
-
China
Links to other databases Top
Suggest others/fix!| Database | ID/link to page |
|---|---|
| World Flora Online | wfo-0001144906 |
| Tropicos | 33800943 |
| KEW | urn:lsid:ipni.org:names:868324-1 |
| The Plant List | tro-33800943 |
| Open Tree Of Life | 705818 |
| NCBI Taxonomy | 316467 |
| IPNI | 868324-1 |
| GBIF | 5664188 |
| EPPO | VIOHO |
| EOL | 2885213 |
| USDA GRIN | 429841 |
| CMAUP | NPO27878 |
Genomes (via NCBI) Top
No reference genome is available on NCBI yet. We are constantly monitoring for new data.
Scientific Literature Top
Below are displayed the latest 15 articles published in PMC (PubMed Central®) and other sources (DOI number only)!
If you wish to see all the related articles click here.
If you wish to see all the related articles click here.
Phytochemical Profile Top
Add a new one!
Below are displayed the proven (via scientific papers) natural compounds!
You can also contribute to this by clicking here.
You can also contribute to this by clicking here.
| Name | PubChem ID | Canonical SMILES | MW | Found in | Proof |
|---|---|---|---|---|---|
| > Benzenoids / Benzene and substituted derivatives / Benzoic acids and derivatives / Benzoic acids | |||||
| Benzoic Acid | 243 | Click to see | 122.12 | unknown | via CMAUP database |
| > Lipids and lipid-like molecules / Fatty Acyls / Fatty alcohols / Long-chain fatty alcohols | |||||
| (R)-nonacosan-10-ol | 342803 | Click to see | 424.80 | unknown | via CMAUP database |
| > Lipids and lipid-like molecules / Prenol lipids / Diterpenoids | |||||
| (-)-Sandaracopimaric acid | 221580 | Click to see | 302.50 | unknown | via CMAUP database |
| (2S,4aR,4bS,7R,10aR)-7-ethenyl-1,1,4a,7-tetramethyl-3,4,4b,5,6,9,10,10a-octahydro-2H-phenanthren-2-ol | 22216597 | Click to see | 288.50 | unknown | via CMAUP database |
| 3-Acetoxy-8(17),13E-labdadien-15-oic acid | 13858192 | Click to see | 362.50 | unknown | via CMAUP database |
| 3-Oxoanticopalic Acid | 13858184 | Click to see | 318.40 | unknown | via CMAUP database |
| Abietic acid | 10569 | Click to see CC(C)C1=CC2=CCC3C(C2CC1)(CCCC3(C)C(=O)O)C | 302.50 | unknown | via CMAUP database |
| Alepterolic acid | 13858188 | Click to see | 320.50 | unknown | via CMAUP database |
| Dehydroabietic acid | 94391 | Click to see CC(C)C1=CC2=C(C=C1)C3(CCCC(C3CC2)(C)C(=O)O)C | 300.40 | unknown | via CMAUP database |
| Levopimaric acid | 221062 | Click to see CC(C)C1=CCC2C(=C1)CCC3C2(CCCC3(C)C(=O)O)C | 302.50 | unknown | via CMAUP database |
| Neoabietic acid | 221118 | Click to see | 302.50 | unknown | via CMAUP database |
| Sandaracopimaradienediol | 12313649 | Click to see CC1(CCC2C(=C1)CCC3C2(CCC(C3(C)CO)O)C)C=C | 304.50 | unknown | via CMAUP database |
| Sandaracopimarinol | 12314286 | Click to see CC1(CCC2C(=C1)CCC3C2(CCCC3(C)CO)C)C=C | 288.50 | unknown | via CMAUP database |
| > Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Acyclic monoterpenoids | |||||
| Linalool, (+)- | 67179 | Click to see | 154.25 | unknown | via CMAUP database |
| Myrcene | 31253 | Click to see | 136.23 | unknown | via CMAUP database |
| > Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Aromatic monoterpenoids | |||||
| P-Cymene | 7463 | Click to see | 134.22 | unknown | via CMAUP database |
| > Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Bicyclic monoterpenoids | |||||
| (-)-beta-Pinene | 440967 | Click to see | 136.23 | unknown | via CMAUP database |
| (1R,3R,6R)-3,7,7-trimethylbicyclo[4.1.0]heptane | 98052623 | Click to see | 138.25 | unknown | via CMAUP database |
| alpha-Pinene, (+)- | 82227 | Click to see | 136.23 | unknown | via CMAUP database |
| Bicyclo[2.2.1]heptane, 1,3,3-trimethyl-, (1S,4R)- | 10877186 | Click to see | 138.25 | unknown | via CMAUP database |
| Bornyl acetate, (-)- | 93009 | Click to see | 196.29 | unknown | via CMAUP database |
| D-Borneol | 6552009 | Click to see | 154.25 | unknown | via CMAUP database |
| > Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Menthane monoterpenoids | |||||
| (+)-Limonene | 440917 | Click to see | 136.23 | unknown | via CMAUP database |
| (+)-Terpinen-4-ol | 2724161 | Click to see CC1=CCC(CC1)(C(C)C)O | 154.25 | unknown | via CMAUP database |
| 4-Methylidene-1-propan-2-ylcyclohexan-1-ol | 10197791 | Click to see CC(C)C1(CCC(=C)CC1)O | 154.25 | unknown | via CMAUP database |
| d-beta-Phellandrene | 442484 | Click to see | 136.23 | unknown | via CMAUP database |
| Terpinolene | 11463 | Click to see | 136.23 | unknown | via CMAUP database |
| > Lipids and lipid-like molecules / Prenol lipids / Sesquiterpenoids | |||||
| (R)-beta-bisabolene | 68128 | Click to see CC1=CCC(CC1)C(=C)CCC=C(C)C | 204.35 | unknown | via CMAUP database |
| Bisabolol | 1549992 | Click to see CC1=CCC(CC1)C(C)(CCC=C(C)C)O | 222.37 | unknown | via CMAUP database |
| delta-Cadinol | 3084311 | Click to see CC1=CC2C(CCC(C2CC1)(C)O)C(C)C | 222.37 | unknown | via CMAUP database |
| > Lipids and lipid-like molecules / Prenol lipids / Terpene glycosides / Triterpene glycosides / Triterpene saponins | |||||
| Acutoside A | 21606142 | Click to see | 781.00 | unknown | https://doi.org/10.1007/BF02980140 |
| > Lipids and lipid-like molecules / Steroids and steroid derivatives / Stigmastanes and derivatives | |||||
| (3S,8R,9R,10R,13R,14R,17R)-17-[(2R,5R)-5-ethyl-6-methylheptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-ol | 11870456 | Click to see CCC(CCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C)C(C)C | 414.70 | unknown | via CMAUP database |
| > Phenylpropanoids and polyketides / Flavonoids / Flavans / Flavanones | |||||
| Pinocembrin | 68071 | Click to see C1C(OC2=CC(=CC(=C2C1=O)O)O)C3=CC=CC=C3 | 256.25 | unknown | via CMAUP database |
| Strobopinin | 442520 | Click to see CC1=C(C2=C(C=C1O)OC(CC2=O)C3=CC=CC=C3)O | 270.28 | unknown | via CMAUP database |
| > Phenylpropanoids and polyketides / Isoflavonoids / Isoflav-2-enes / Isoflavones | |||||
| 2'-Hydroxydaidzein | 5280520 | Click to see | 270.24 | unknown | https://doi.org/10.1248/BPB.28.925 |
| > Phenylpropanoids and polyketides / Isoflavonoids / Isoflavonoid O-glycosides | |||||
| (3S)-5-hydroxy-3-(4-hydroxyphenyl)-6-methoxy-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3-dihydrochromen-4-one | 93517223 | Click to see COC1=C(C=C2C(=C1O)C(=O)C(CO2)C3=CC=C(C=C3)O)OC4C(C(C(C(O4)CO)O)O)O | 464.40 | unknown | https://doi.org/10.1016/J.BMC.2006.07.002 |
| (3S)-5-hydroxy-6-methoxy-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3-[4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]-2,3-dihydrochromen-4-one | 163023979 | Click to see | 626.60 | unknown | https://doi.org/10.1016/J.BMC.2006.07.002 |
| (3S)-5,7-dihydroxy-6-methoxy-3-[4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]-2,3-dihydrochromen-4-one | 162921101 | Click to see COC1=C(C2=C(C=C1O)OCC(C2=O)C3=CC=C(C=C3)OC4C(C(C(C(O4)CO)O)O)O)O | 464.40 | unknown | https://doi.org/10.1016/J.BMC.2006.07.002 |
| 5-Hydroxy-3-(4-hydroxyphenyl)-6-methoxy-7-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3-dihydrochromen-4-one | 76045301 | Click to see | 464.40 | unknown | https://doi.org/10.1016/J.BMC.2006.07.002 |
| 5-hydroxy-6-methoxy-3-(4-methoxyphenyl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxychromen-4-one | 44452420 | Click to see | 608.50 | unknown | https://doi.org/10.1142/S0192415X08006247 |
| 5-Hydroxy-6-methoxy-7-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3-[4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]-2,3-dihydrochromen-4-one | 163023978 | Click to see | 626.60 | unknown | https://doi.org/10.1016/J.BMC.2006.07.002 |
| 5-Hydroxy-6-methoxy-7-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3-[4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]chromen-4-one | 162916994 | Click to see | 624.50 | unknown | https://doi.org/10.1248/BPB.28.1123 |
| 5,7-Dihydroxy-6-methoxy-3-[4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]-2,3-dihydrochromen-4-one | 162921100 | Click to see COC1=C(C2=C(C=C1O)OCC(C2=O)C3=CC=C(C=C3)OC4C(C(C(C(O4)CO)O)O)O)O | 464.40 | unknown | https://doi.org/10.1016/J.BMC.2006.07.002 |
| Kakkalide | 5490351 | Click to see | 608.50 | unknown | https://doi.org/10.1142/S0192415X08006247 |
| Tectorigenin-7-O-beta-glucosyl-4'-O-beta-glucoside | 16126681 | Click to see COC1=C(C=C2C(=C1O)C(=O)C(=CO2)C3=CC=C(C=C3)OC4C(C(C(C(O4)CO)O)O)O)OC5C(C(C(C(O5)CO)O)O)O | 624.50 | unknown | https://doi.org/10.1248/BPB.28.1123 |
| > Phenylpropanoids and polyketides / Isoflavonoids / O-methylated isoflavonoids / 6-O-methylated isoflavonoids | |||||
| (3S)-5,7-dihydroxy-3-(4-hydroxyphenyl)-6-methoxy-2,3-dihydrochromen-4-one | 162993209 | Click to see | 302.28 | unknown | https://doi.org/10.1016/J.BMC.2006.07.002 |
| 5,7-Dihydroxy-3-(4-hydroxyphenyl)-6-methoxy-2,3-dihydrochromen-4-one | 131836908 | Click to see COC1=C(C2=C(C=C1O)OCC(C2=O)C3=CC=C(C=C3)O)O | 302.28 | unknown | https://doi.org/10.1016/J.BMC.2006.07.002 |
| > Phenylpropanoids and polyketides / Stilbenes | |||||
| 3-Methoxy-5-(2-phenylethenyl)phenol | 182229 | Click to see COC1=CC(=CC(=C1)O)C=CC2=CC=CC=C2 | 226.27 | unknown | via CMAUP database |
| 3,5-Dimethoxystilbene | 5316874 | Click to see | 240.30 | unknown | via CMAUP database |
Collections Top
| In private collections | 0 |
| In public collections | 0 |