Germacrone

Details

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Internal ID 78f6df60-3353-45bc-8b41-a4f1080d776a
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Sesquiterpenoids > Germacrane sesquiterpenoids
IUPAC Name (3E,7E)-3,7-dimethyl-10-propan-2-ylidenecyclodeca-3,7-dien-1-one
SMILES (Canonical) CC1=CCC(=C(C)C)C(=O)CC(=CCC1)C
SMILES (Isomeric) C/C/1=C\CC(=C(C)C)C(=O)C/C(=C/CC1)/C
InChI InChI=1S/C15H22O/c1-11(2)14-9-8-12(3)6-5-7-13(4)10-15(14)16/h7-8H,5-6,9-10H2,1-4H3/b12-8+,13-7+
InChI Key CAULGCQHVOVVRN-SWZPTJTJSA-N
Popularity 78 references in papers

Physical and Chemical Properties

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Molecular Formula C15H22O
Molecular Weight 218.33 g/mol
Exact Mass 218.167065321 g/mol
Topological Polar Surface Area (TPSA) 17.10 Ų
XlogP 3.50
Atomic LogP (AlogP) 4.36
H-Bond Acceptor 1
H-Bond Donor 0
Rotatable Bonds 0

Synonyms

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6902-91-6
Germacron
(3E,7E)-3,7-Dimethyl-10-(propan-2-ylidene)cyclodeca-3,7-dienone
E2WQ6N4FBP
(3E,7E)-3,7-dimethyl-10-propan-2-ylidenecyclodeca-3,7-dien-1-one
3,7-Cyclodecadien-1-one, 3,7-dimethyl-10-(1-methylethylidene)-, (E,E)-
(E,E)-Germacrone
Germacra-3,7(11),9-trien-6-one, (E,E)-
Germacrone,(S)
Germacrol (obsol;)
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Germacrone

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9969 99.69%
Caco-2 + 0.9395 93.95%
Blood Brain Barrier + 0.7500 75.00%
Human oral bioavailability + 0.6000 60.00%
Subcellular localzation Mitochondria 0.5086 50.86%
OATP2B1 inhibitior - 0.8523 85.23%
OATP1B1 inhibitior + 0.9654 96.54%
OATP1B3 inhibitior + 0.9189 91.89%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior - 0.6317 63.17%
P-glycoprotein inhibitior - 0.9386 93.86%
P-glycoprotein substrate - 0.9738 97.38%
CYP3A4 substrate - 0.5551 55.51%
CYP2C9 substrate - 0.8046 80.46%
CYP2D6 substrate - 0.8590 85.90%
CYP3A4 inhibition - 0.9215 92.15%
CYP2C9 inhibition - 0.8742 87.42%
CYP2C19 inhibition - 0.8145 81.45%
CYP2D6 inhibition - 0.9497 94.97%
CYP1A2 inhibition - 0.5955 59.55%
CYP2C8 inhibition - 0.9309 93.09%
CYP inhibitory promiscuity - 0.8579 85.79%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8600 86.00%
Carcinogenicity (trinary) Non-required 0.5634 56.34%
Eye corrosion - 0.8266 82.66%
Eye irritation + 0.8608 86.08%
Skin irritation + 0.7027 70.27%
Skin corrosion - 0.9574 95.74%
Ames mutagenesis - 0.7400 74.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5726 57.26%
Micronuclear - 0.9900 99.00%
Hepatotoxicity + 0.9158 91.58%
skin sensitisation + 0.9365 93.65%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity - 0.6889 68.89%
Mitochondrial toxicity - 0.8000 80.00%
Nephrotoxicity + 0.5293 52.93%
Acute Oral Toxicity (c) II 0.5418 54.18%
Estrogen receptor binding - 0.9061 90.61%
Androgen receptor binding - 0.7880 78.80%
Thyroid receptor binding - 0.8461 84.61%
Glucocorticoid receptor binding - 0.6665 66.65%
Aromatase binding - 0.8117 81.17%
PPAR gamma - 0.7511 75.11%
Honey bee toxicity - 0.9223 92.23%
Biodegradation - 0.6000 60.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9673 96.73%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.73% 95.56%
CHEMBL2581 P07339 Cathepsin D 91.33% 98.95%
CHEMBL4208 P20618 Proteasome component C5 89.39% 90.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 88.83% 91.11%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.80% 99.23%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.67% 90.71%

Cross-Links

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PubChem 6436348
NPASS NPC301972
LOTUS LTS0207391
wikiData Q15410959