(4S,5R)-4-hydroxy-5-(hydroxymethyl)dihydrofuran-2(3H)-one

Details

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Internal ID 121c4cee-7d80-421a-ad30-8bcc0d04b172
Taxonomy Organoheterocyclic compounds > Lactones > Gamma butyrolactones
IUPAC Name (4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-one
SMILES (Canonical) C1C(C(OC1=O)CO)O
SMILES (Isomeric) C1[C@@H]([C@H](OC1=O)CO)O
InChI InChI=1S/C5H8O4/c6-2-4-3(7)1-5(8)9-4/h3-4,6-7H,1-2H2/t3-,4+/m0/s1
InChI Key YIXDEYPPAGPYDP-IUYQGCFVSA-N
Popularity 68 references in papers

Physical and Chemical Properties

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Molecular Formula C5H8O4
Molecular Weight 132.11 g/mol
Exact Mass 132.04225873 g/mol
Topological Polar Surface Area (TPSA) 66.80 Ų
XlogP -0.90
Atomic LogP (AlogP) -1.34
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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(4S,5R)-4-hydroxy-5-(hydroxymethyl)dihydrofuran-2(3H)-one
2-Deoxyribonolactone
2-Deoxy-D-ribonic acid-1,4-lactone
(4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-one
2-deoxy-D-ribono-1,4-lactone
2-Deoxy-ribono-1,4-lactone
Deoxyribonolactone
2'-Deoxyribolactone
2-Deoxy-D-ribonic-1,4-lactone
2,4,5-Trihydroxypentanoic acid gamma-lactone
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of (4S,5R)-4-hydroxy-5-(hydroxymethyl)dihydrofuran-2(3H)-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6192 61.92%
Caco-2 - 0.8506 85.06%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability + 0.6143 61.43%
Subcellular localzation Mitochondria 0.6987 69.87%
OATP2B1 inhibitior - 0.8521 85.21%
OATP1B1 inhibitior + 0.9274 92.74%
OATP1B3 inhibitior + 0.9465 94.65%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior - 0.9770 97.70%
P-glycoprotein inhibitior - 0.9801 98.01%
P-glycoprotein substrate - 0.9801 98.01%
CYP3A4 substrate - 0.7149 71.49%
CYP2C9 substrate - 0.8047 80.47%
CYP2D6 substrate - 0.8332 83.32%
CYP3A4 inhibition - 0.9710 97.10%
CYP2C9 inhibition - 0.9487 94.87%
CYP2C19 inhibition - 0.9319 93.19%
CYP2D6 inhibition - 0.9607 96.07%
CYP1A2 inhibition - 0.9443 94.43%
CYP2C8 inhibition - 0.9956 99.56%
CYP inhibitory promiscuity - 0.9630 96.30%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7559 75.59%
Eye corrosion - 0.9788 97.88%
Eye irritation + 0.9058 90.58%
Skin irritation - 0.7859 78.59%
Skin corrosion - 0.9279 92.79%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7738 77.38%
Micronuclear - 0.8126 81.26%
Hepatotoxicity + 0.5165 51.65%
skin sensitisation - 0.9476 94.76%
Respiratory toxicity - 0.6444 64.44%
Reproductive toxicity - 0.5333 53.33%
Mitochondrial toxicity - 0.6875 68.75%
Nephrotoxicity + 0.7135 71.35%
Acute Oral Toxicity (c) III 0.4726 47.26%
Estrogen receptor binding - 0.9241 92.41%
Androgen receptor binding - 0.8047 80.47%
Thyroid receptor binding - 0.8546 85.46%
Glucocorticoid receptor binding - 0.7726 77.26%
Aromatase binding - 0.8469 84.69%
PPAR gamma - 0.8359 83.59%
Honey bee toxicity - 0.9108 91.08%
Biodegradation + 0.7500 75.00%
Crustacea aquatic toxicity - 0.6700 67.00%
Fish aquatic toxicity - 0.6710 67.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.52% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.67% 97.09%
CHEMBL2996 Q05655 Protein kinase C delta 84.44% 97.79%
CHEMBL2581 P07339 Cathepsin D 83.86% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.63% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 82.37% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.15% 95.56%

Cross-Links

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PubChem 161815
NPASS NPC46254
LOTUS LTS0075306
wikiData Q27102301