Procyanidin B6

Details

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Internal ID 838feb0a-0192-4426-a50f-3227373f7d96
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Biflavonoids and polyflavonoids
IUPAC Name (2R,3S)-2-(3,4-dihydroxyphenyl)-6-[(2R,3S,4R)-2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-3,4-dihydro-2H-chromen-4-yl]-3,4-dihydro-2H-chromene-3,5,7-triol
SMILES (Canonical) C1C(C(OC2=C1C(=C(C(=C2)O)C3C(C(OC4=CC(=CC(=C34)O)O)C5=CC(=C(C=C5)O)O)O)O)C6=CC(=C(C=C6)O)O)O
SMILES (Isomeric) C1[C@@H]([C@H](OC2=C1C(=C(C(=C2)O)[C@H]3[C@@H]([C@H](OC4=CC(=CC(=C34)O)O)C5=CC(=C(C=C5)O)O)O)O)C6=CC(=C(C=C6)O)O)O
InChI InChI=1S/C30H26O12/c31-13-7-19(36)24-23(8-13)42-30(12-2-4-16(33)18(35)6-12)28(40)26(24)25-20(37)10-22-14(27(25)39)9-21(38)29(41-22)11-1-3-15(32)17(34)5-11/h1-8,10,21,26,28-40H,9H2/t21-,26-,28-,29+,30+/m0/s1
InChI Key GMISZFQPFDAPGI-ZBRHZRBFSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H26O12
Molecular Weight 578.50 g/mol
Exact Mass 578.14242626 g/mol
Topological Polar Surface Area (TPSA) 221.00 Ų
XlogP 2.40
Atomic LogP (AlogP) 3.00
H-Bond Acceptor 12
H-Bond Donor 10
Rotatable Bonds 3

Synonyms

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Procyanidol B6
12798-58-2
SZ77QV8UB3
CHEBI:75619
(2R,3S)-2-(3,4-dihydroxyphenyl)-6-[(2R,3S,4R)-2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-3,4-dihydro-2H-chromen-4-yl]-3,4-dihydro-2H-chromene-3,5,7-triol
(2R,2R,3S,3S,4R)-2,2-Bis(3,4-dihydroxyphenyl)-3,3,4,4-tetrahydro(4,6-bi-2H-1-benzopyran)-3,3,5,5,7,7-hexol
(4,6-Bi-2H-1-benzopyran)-3,3,5,5,7,7-hexol, 2,2-bis(3,4-dihydroxyphenyl)-3,3,4,4-tetrahydro-, (2R,2R,3S,3S,4R)-
UNII-SZ77QV8UB3
CHEMBL502984
SCHEMBL13999378
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Procyanidin B6

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8698 86.98%
Caco-2 - 0.9156 91.56%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.4793 47.93%
OATP2B1 inhibitior - 0.5597 55.97%
OATP1B1 inhibitior + 0.9193 91.93%
OATP1B3 inhibitior + 0.9459 94.59%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.8234 82.34%
P-glycoprotein inhibitior + 0.6662 66.62%
P-glycoprotein substrate - 0.8403 84.03%
CYP3A4 substrate + 0.5553 55.53%
CYP2C9 substrate - 0.5994 59.94%
CYP2D6 substrate + 0.5264 52.64%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9026 90.26%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9155 91.55%
CYP2C8 inhibition + 0.6862 68.62%
CYP inhibitory promiscuity - 0.8625 86.25%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6139 61.39%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.8369 83.69%
Skin irritation - 0.6044 60.44%
Skin corrosion - 0.9317 93.17%
Ames mutagenesis + 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8518 85.18%
Micronuclear + 0.7859 78.59%
Hepatotoxicity - 0.7250 72.50%
skin sensitisation - 0.7665 76.65%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.8000 80.00%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity - 0.7396 73.96%
Acute Oral Toxicity (c) IV 0.5696 56.96%
Estrogen receptor binding + 0.7500 75.00%
Androgen receptor binding + 0.7495 74.95%
Thyroid receptor binding + 0.6228 62.28%
Glucocorticoid receptor binding + 0.5991 59.91%
Aromatase binding - 0.5573 55.73%
PPAR gamma + 0.7218 72.18%
Honey bee toxicity - 0.8002 80.02%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.6855 68.55%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.73% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 99.31% 91.49%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.63% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.33% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.41% 89.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 89.66% 99.15%
CHEMBL1929 P47989 Xanthine dehydrogenase 85.70% 96.12%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.49% 95.56%
CHEMBL4040 P28482 MAP kinase ERK2 83.22% 83.82%
CHEMBL2535 P11166 Glucose transporter 83.12% 98.75%
CHEMBL3194 P02766 Transthyretin 82.79% 90.71%
CHEMBL4208 P20618 Proteasome component C5 82.52% 90.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.26% 95.89%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 81.97% 96.37%
CHEMBL3401 O75469 Pregnane X receptor 81.79% 94.73%
CHEMBL2581 P07339 Cathepsin D 80.03% 98.95%

Cross-Links

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PubChem 474540
NPASS NPC263940
ChEMBL CHEMBL502984
LOTUS LTS0173939
wikiData Q7247558