Norbergenin

Details

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Internal ID ca823c3f-5f4c-492f-8fcd-63661aab0dce
Taxonomy Benzenoids > Benzene and substituted derivatives > Benzoic acids and derivatives > Hydroxybenzoic acid derivatives > Gallic acid and derivatives
IUPAC Name (2R,3S,4S,4aR,10bS)-3,4,8,9,10-pentahydroxy-2-(hydroxymethyl)-3,4,4a,10b-tetrahydro-2H-pyrano[3,2-c]isochromen-6-one
SMILES (Canonical) C1=C2C(=C(C(=C1O)O)O)C3C(C(C(C(O3)CO)O)O)OC2=O
SMILES (Isomeric) C1=C2C(=C(C(=C1O)O)O)[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)OC2=O
InChI InChI=1S/C13H14O9/c14-2-5-8(17)10(19)12-11(21-5)6-3(13(20)22-12)1-4(15)7(16)9(6)18/h1,5,8,10-12,14-19H,2H2/t5-,8-,10+,11+,12-/m1/s1
InChI Key GDYGAIKPBLFCKR-OIPGZRGRSA-N
Popularity 9 references in papers

Physical and Chemical Properties

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Molecular Formula C13H14O9
Molecular Weight 314.24 g/mol
Exact Mass 314.06378202 g/mol
Topological Polar Surface Area (TPSA) 157.00 Ų
XlogP -1.30
Atomic LogP (AlogP) -1.50
H-Bond Acceptor 9
H-Bond Donor 6
Rotatable Bonds 1

Synonyms

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79595-97-4
BS9UP8B38P
DEMETHYLBERGENIN
CHEMBL3823447
EX-A5118
HY-N9447
AKOS040759641
MS-24600
CS-0173323
(2R,3S,4S,4AR,10BS)-3,4,4A,10B-TETRAHYDRO-3,4,8,9,10-PENTAHYDROXY-2-(HYDROXYMETHYL)PYRANO(3,2-C)(2)BENZOPYRAN-6(2H)-ONE
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Norbergenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5179 51.79%
Caco-2 - 0.9543 95.43%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.5143 51.43%
Subcellular localzation Mitochondria 0.5142 51.42%
OATP2B1 inhibitior - 0.8585 85.85%
OATP1B1 inhibitior - 0.5584 55.84%
OATP1B3 inhibitior + 0.9602 96.02%
MATE1 inhibitior - 0.7600 76.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9716 97.16%
P-glycoprotein inhibitior - 0.9205 92.05%
P-glycoprotein substrate - 0.9533 95.33%
CYP3A4 substrate - 0.5398 53.98%
CYP2C9 substrate - 0.8034 80.34%
CYP2D6 substrate - 0.8387 83.87%
CYP3A4 inhibition - 0.9315 93.15%
CYP2C9 inhibition - 0.9530 95.30%
CYP2C19 inhibition - 0.9428 94.28%
CYP2D6 inhibition - 0.9468 94.68%
CYP1A2 inhibition - 0.9273 92.73%
CYP2C8 inhibition - 0.9083 90.83%
CYP inhibitory promiscuity - 0.9206 92.06%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7220 72.20%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.5464 54.64%
Skin irritation - 0.7643 76.43%
Skin corrosion - 0.9643 96.43%
Ames mutagenesis + 0.5458 54.58%
Human Ether-a-go-go-Related Gene inhibition - 0.6687 66.87%
Micronuclear + 0.5392 53.92%
Hepatotoxicity - 0.5217 52.17%
skin sensitisation - 0.8160 81.60%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.6444 64.44%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.6576 65.76%
Acute Oral Toxicity (c) IV 0.4084 40.84%
Estrogen receptor binding + 0.5890 58.90%
Androgen receptor binding + 0.6148 61.48%
Thyroid receptor binding + 0.5160 51.60%
Glucocorticoid receptor binding + 0.6069 60.69%
Aromatase binding - 0.6112 61.12%
PPAR gamma + 0.5645 56.45%
Honey bee toxicity - 0.8693 86.93%
Biodegradation - 0.5500 55.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity - 0.4184 41.84%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.03% 91.11%
CHEMBL2581 P07339 Cathepsin D 90.63% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.37% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 88.51% 94.73%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.44% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.68% 94.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 83.10% 99.15%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.91% 86.92%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.37% 99.17%

Cross-Links

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PubChem 90476206
NPASS NPC273789
LOTUS LTS0253078
wikiData Q105007024