Dendrobine

Details

Top
Internal ID 8577ac44-0245-41e1-b43d-bf65e5fe9b24
Taxonomy Organoheterocyclic compounds > Indoles and derivatives
IUPAC Name (1S,4S,7S,8R,11R,12R,13S)-2,12-dimethyl-13-propan-2-yl-10-oxa-2-azatetracyclo[5.4.1.18,11.04,12]tridecan-9-one
SMILES (Canonical) CC(C)C1C2C3CCC4C3(C(C1OC2=O)N(C4)C)C
SMILES (Isomeric) CC(C)[C@H]1[C@H]2[C@@H]3CC[C@H]4[C@@]3([C@@H]([C@@H]1OC2=O)N(C4)C)C
InChI InChI=1S/C16H25NO2/c1-8(2)11-12-10-6-5-9-7-17(4)14(16(9,10)3)13(11)19-15(12)18/h8-14H,5-7H2,1-4H3/t9-,10+,11+,12-,13-,14-,16+/m1/s1
InChI Key RYAHJFGVOCZDEI-UFFNCVEVSA-N
Popularity 51 references in papers

Physical and Chemical Properties

Top
Molecular Formula C16H25NO2
Molecular Weight 263.37 g/mol
Exact Mass 263.188529040 g/mol
Topological Polar Surface Area (TPSA) 29.50 Ų
XlogP 3.00
Atomic LogP (AlogP) 2.16
H-Bond Acceptor 3
H-Bond Donor 0
Rotatable Bonds 1

Synonyms

Top
2115-91-5
Dendroban-12-one
From Dendrobium nobile
A9N9FB9DPG
NSC-607862
C09943
CHEBI:4400
CHEMBL4173720
BCP13062
HY-N0638
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of Dendrobine

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9131 91.31%
Caco-2 + 0.8454 84.54%
Blood Brain Barrier + 0.8000 80.00%
Human oral bioavailability + 0.6143 61.43%
Subcellular localzation Lysosomes 0.5850 58.50%
OATP2B1 inhibitior - 0.8479 84.79%
OATP1B1 inhibitior + 0.9442 94.42%
OATP1B3 inhibitior + 0.9479 94.79%
MATE1 inhibitior - 0.7600 76.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior - 0.9518 95.18%
P-glycoprotein inhibitior - 0.8535 85.35%
P-glycoprotein substrate - 0.5367 53.67%
CYP3A4 substrate + 0.6183 61.83%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.3541 35.41%
CYP3A4 inhibition - 0.8728 87.28%
CYP2C9 inhibition - 0.8979 89.79%
CYP2C19 inhibition - 0.7951 79.51%
CYP2D6 inhibition - 0.8423 84.23%
CYP1A2 inhibition - 0.7401 74.01%
CYP2C8 inhibition - 0.9816 98.16%
CYP inhibitory promiscuity - 0.9609 96.09%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8900 89.00%
Carcinogenicity (trinary) Non-required 0.6527 65.27%
Eye corrosion - 0.9782 97.82%
Eye irritation - 0.9717 97.17%
Skin irritation - 0.7685 76.85%
Skin corrosion - 0.8101 81.01%
Ames mutagenesis - 0.6601 66.01%
Human Ether-a-go-go-Related Gene inhibition - 0.5171 51.71%
Micronuclear - 0.7400 74.00%
Hepatotoxicity + 0.5801 58.01%
skin sensitisation - 0.7855 78.55%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.5444 54.44%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity + 0.4518 45.18%
Acute Oral Toxicity (c) III 0.6412 64.12%
Estrogen receptor binding + 0.6052 60.52%
Androgen receptor binding - 0.5230 52.30%
Thyroid receptor binding + 0.5287 52.87%
Glucocorticoid receptor binding - 0.5201 52.01%
Aromatase binding - 0.7420 74.20%
PPAR gamma - 0.7239 72.39%
Honey bee toxicity - 0.8369 83.69%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity + 0.7400 74.00%
Fish aquatic toxicity + 0.6782 67.82%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.04% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.42% 96.09%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 91.38% 93.40%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 90.13% 96.77%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 89.01% 96.38%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.30% 95.56%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 86.34% 85.11%
CHEMBL2581 P07339 Cathepsin D 85.58% 98.95%
CHEMBL4072 P07858 Cathepsin B 84.21% 93.67%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.14% 95.89%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.94% 90.71%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.19% 99.23%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.37% 100.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.31% 93.04%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.29% 97.14%
CHEMBL3746 P80365 11-beta-hydroxysteroid dehydrogenase 2 81.21% 94.78%
CHEMBL4588 P22894 Matrix metalloproteinase 8 80.98% 94.66%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 80.36% 96.47%

Cross-Links

Top
PubChem 442523
NPASS NPC292828
LOTUS LTS0236464
wikiData Q15410933