Centelloside D

Details

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Internal ID 2393ac84-4b69-40da-b61e-7fc98f752342
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name [(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl] (4aS,6aR,6aS,6bR,8R,8aR,9R,10R,11R,12aR,14bS)-8,10,11-trihydroxy-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate
SMILES (Canonical) CC1(CCC2(CCC3(C(=CCC4C3(CC(C5C4(CC(C(C5(C)CO)O)O)C)O)C)C2C1)C)C(=O)OC6C(C(C(C(O6)COC7C(C(C(C(O7)CO)O)O)O)O)O)O)C
SMILES (Isomeric) C[C@@]12CC[C@]3(CCC(C[C@H]3C1=CC[C@H]4[C@]2(C[C@H]([C@@H]5[C@@]4(C[C@H]([C@@H]([C@@]5(C)CO)O)O)C)O)C)(C)C)C(=O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)O)O)O
InChI InChI=1S/C42H68O16/c1-37(2)9-11-42(36(54)58-35-31(52)29(50)27(48)24(57-35)17-55-34-30(51)28(49)26(47)23(16-43)56-34)12-10-40(5)19(20(42)13-37)7-8-25-38(3)14-22(46)33(53)39(4,18-44)32(38)21(45)15-41(25,40)6/h7,20-35,43-53H,8-18H2,1-6H3/t20-,21+,22+,23+,24+,25+,26+,27+,28-,29-,30+,31+,32+,33-,34+,35-,38+,39-,40+,41+,42-/m0/s1
InChI Key ZYWQVWWCWIVAEF-WZLWCHHLSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C42H68O16
Molecular Weight 829.00 g/mol
Exact Mass 828.45073608 g/mol
Topological Polar Surface Area (TPSA) 277.00 Ų
XlogP 0.50
Atomic LogP (AlogP) -0.77
H-Bond Acceptor 16
H-Bond Donor 11
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Centelloside D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7891 78.91%
Caco-2 - 0.8884 88.84%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.8567 85.67%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8599 85.99%
OATP1B3 inhibitior - 0.5700 57.00%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.6276 62.76%
BSEP inhibitior - 0.4566 45.66%
P-glycoprotein inhibitior + 0.7349 73.49%
P-glycoprotein substrate - 0.6582 65.82%
CYP3A4 substrate + 0.6995 69.95%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8587 85.87%
CYP3A4 inhibition - 0.9300 93.00%
CYP2C9 inhibition - 0.8838 88.38%
CYP2C19 inhibition - 0.9101 91.01%
CYP2D6 inhibition - 0.9422 94.22%
CYP1A2 inhibition - 0.8933 89.33%
CYP2C8 inhibition + 0.5958 59.58%
CYP inhibitory promiscuity - 0.9668 96.68%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6254 62.54%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9095 90.95%
Skin irritation - 0.6103 61.03%
Skin corrosion - 0.9480 94.80%
Ames mutagenesis - 0.7700 77.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7157 71.57%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.8500 85.00%
skin sensitisation - 0.8917 89.17%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity - 0.7625 76.25%
Nephrotoxicity - 0.5566 55.66%
Acute Oral Toxicity (c) III 0.7945 79.45%
Estrogen receptor binding + 0.7770 77.70%
Androgen receptor binding + 0.7428 74.28%
Thyroid receptor binding - 0.5988 59.88%
Glucocorticoid receptor binding + 0.6446 64.46%
Aromatase binding + 0.6358 63.58%
PPAR gamma + 0.7441 74.41%
Honey bee toxicity - 0.7442 74.42%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6950 69.50%
Fish aquatic toxicity + 0.9411 94.11%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.12% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.50% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.43% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.82% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.76% 96.61%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 89.34% 96.77%
CHEMBL253 P34972 Cannabinoid CB2 receptor 88.94% 97.25%
CHEMBL2581 P07339 Cathepsin D 87.92% 98.95%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 87.46% 86.92%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.29% 95.56%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 84.75% 96.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.03% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.70% 86.33%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.48% 95.50%
CHEMBL5255 O00206 Toll-like receptor 4 82.92% 92.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.82% 89.00%

Cross-Links

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PubChem 56964357
NPASS NPC226141