Xanthohumol

Details

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Internal ID 3eb145e2-0d9a-4ec7-97d8-14fc6a46591c
Taxonomy Phenylpropanoids and polyketides > Linear 1,3-diarylpropanoids > Chalcones and dihydrochalcones > 3-prenylated chalcones
IUPAC Name (E)-1-[2,4-dihydroxy-6-methoxy-3-(3-methylbut-2-enyl)phenyl]-3-(4-hydroxyphenyl)prop-2-en-1-one
SMILES (Canonical) CC(=CCC1=C(C(=C(C=C1O)OC)C(=O)C=CC2=CC=C(C=C2)O)O)C
SMILES (Isomeric) CC(=CCC1=C(C(=C(C=C1O)OC)C(=O)/C=C/C2=CC=C(C=C2)O)O)C
InChI InChI=1S/C21H22O5/c1-13(2)4-10-16-18(24)12-19(26-3)20(21(16)25)17(23)11-7-14-5-8-15(22)9-6-14/h4-9,11-12,22,24-25H,10H2,1-3H3/b11-7+
InChI Key ORXQGKIUCDPEAJ-YRNVUSSQSA-N
Popularity 779 references in papers

Physical and Chemical Properties

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Molecular Formula C21H22O5
Molecular Weight 354.40 g/mol
Exact Mass 354.14672380 g/mol
Topological Polar Surface Area (TPSA) 87.00 Ų
XlogP 5.10
Atomic LogP (AlogP) 4.22
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 6

Synonyms

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6754-58-1
569-83-5
1-(2,4-Dihydroxy-6-methoxy-3-(3-methylbut-2-en-1-yl)phenyl)-3-(4-hydroxyphenyl)prop-2-en-1-one
Xantho-flav
(E)-1-[2,4-dihydroxy-6-methoxy-3-(3-methylbut-2-enyl)phenyl]-3-(4-hydroxyphenyl)prop-2-en-1-one
UNII-T4467YT1NT
T4467YT1NT
CHEBI:66331
Xanthohumol(Random Configuration)
2',4,4'-trihydroxy-6'-methoxy-3'-prenylchalcone
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Xanthohumol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9938 99.38%
Caco-2 + 0.7700 77.00%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.7846 78.46%
OATP2B1 inhibitior - 0.5760 57.60%
OATP1B1 inhibitior + 0.8684 86.84%
OATP1B3 inhibitior + 0.8882 88.82%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.8346 83.46%
P-glycoprotein inhibitior + 0.6741 67.41%
P-glycoprotein substrate - 0.7055 70.55%
CYP3A4 substrate + 0.5362 53.62%
CYP2C9 substrate - 0.7875 78.75%
CYP2D6 substrate - 0.8322 83.22%
CYP3A4 inhibition - 0.5888 58.88%
CYP2C9 inhibition + 0.8590 85.90%
CYP2C19 inhibition + 0.9456 94.56%
CYP2D6 inhibition - 0.6726 67.26%
CYP1A2 inhibition + 0.8916 89.16%
CYP2C8 inhibition + 0.7880 78.80%
CYP inhibitory promiscuity + 0.9141 91.41%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.8016 80.16%
Carcinogenicity (trinary) Non-required 0.7628 76.28%
Eye corrosion - 0.9886 98.86%
Eye irritation + 0.7001 70.01%
Skin irritation - 0.8071 80.71%
Skin corrosion - 0.9488 94.88%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3939 39.39%
Micronuclear - 0.5500 55.00%
Hepatotoxicity - 0.6343 63.43%
skin sensitisation - 0.6719 67.19%
Respiratory toxicity - 0.6778 67.78%
Reproductive toxicity + 0.7111 71.11%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.7174 71.74%
Acute Oral Toxicity (c) III 0.6469 64.69%
Estrogen receptor binding + 0.9499 94.99%
Androgen receptor binding + 0.8139 81.39%
Thyroid receptor binding + 0.6661 66.61%
Glucocorticoid receptor binding + 0.8672 86.72%
Aromatase binding + 0.8375 83.75%
PPAR gamma + 0.8830 88.30%
Honey bee toxicity - 0.8619 86.19%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.7055 70.55%
Fish aquatic toxicity + 0.9970 99.70%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 6600 nM
IC50
PMID: 22537682
CHEMBL215 P09917 Arachidonate 5-lipoxygenase 2100 nM
2900 nM
IC50
IC50
PMID: 26918635
PMID: 26918635

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.45% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.01% 86.33%
CHEMBL3194 P02766 Transthyretin 94.23% 90.71%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 93.87% 96.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.09% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.67% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.54% 94.45%
CHEMBL4208 P20618 Proteasome component C5 88.41% 90.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.13% 85.14%
CHEMBL2581 P07339 Cathepsin D 87.81% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.37% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 86.30% 94.73%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 86.13% 89.62%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 84.74% 95.50%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 84.39% 91.71%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.89% 89.00%
CHEMBL2535 P11166 Glucose transporter 81.01% 98.75%
CHEMBL3192 Q9BY41 Histone deacetylase 8 80.44% 93.99%

Cross-Links

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PubChem 639665
NPASS NPC249606
ChEMBL CHEMBL253896
LOTUS LTS0109920
wikiData Q408088