Hellebrigenin

Details

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Internal ID f7d9fd97-d2ee-40dc-bc33-309f65dbf14d
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Bufanolides and derivatives
IUPAC Name (3S,5S,8R,9S,10S,13R,14S,17R)-3,5,14-trihydroxy-13-methyl-17-(6-oxopyran-3-yl)-2,3,4,6,7,8,9,11,12,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-10-carbaldehyde
SMILES (Canonical) CC12CCC3C(C1(CCC2C4=COC(=O)C=C4)O)CCC5(C3(CCC(C5)O)C=O)O
SMILES (Isomeric) C[C@]12CC[C@H]3[C@H]([C@]1(CC[C@@H]2C4=COC(=O)C=C4)O)CC[C@]5([C@@]3(CC[C@@H](C5)O)C=O)O
InChI InChI=1S/C24H32O6/c1-21-8-5-18-19(6-10-23(28)12-16(26)4-9-22(18,23)14-25)24(21,29)11-7-17(21)15-2-3-20(27)30-13-15/h2-3,13-14,16-19,26,28-29H,4-12H2,1H3/t16-,17+,18-,19+,21+,22-,23-,24-/m0/s1
InChI Key TVKPTWJPKVSGJB-XHCIOXAKSA-N
Popularity 21 references in papers

Physical and Chemical Properties

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Molecular Formula C24H32O6
Molecular Weight 416.50 g/mol
Exact Mass 416.21988874 g/mol
Topological Polar Surface Area (TPSA) 104.00 Ų
XlogP 1.20
Atomic LogP (AlogP) 2.54
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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Bufotalidin
465-90-7
Gellebrigenin
EINECS 207-368-3
NSC 89594
BRN 0056259
5-beta-BUFA-20,22-DIENOLIDE, 3-beta,5,14-TRIHYDROXY-19-OXO-
5-18-05-00180 (Beilstein Handbook Reference)
19-Oxo-3-beta,5,14-trihydroxy-5-beta-bufa-20,22-dienolide
Bufa-20,22-dienolide, 3,5,14-trihydroxy-19-oxo-, (3beta,5beta)-
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Hellebrigenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9556 95.56%
Caco-2 - 0.7594 75.94%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.7652 76.52%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8669 86.69%
OATP1B3 inhibitior + 0.9219 92.19%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8858 88.58%
BSEP inhibitior + 0.8391 83.91%
P-glycoprotein inhibitior - 0.8069 80.69%
P-glycoprotein substrate - 0.7752 77.52%
CYP3A4 substrate + 0.6759 67.59%
CYP2C9 substrate - 0.7961 79.61%
CYP2D6 substrate - 0.8309 83.09%
CYP3A4 inhibition - 0.5824 58.24%
CYP2C9 inhibition - 0.9044 90.44%
CYP2C19 inhibition - 0.9115 91.15%
CYP2D6 inhibition - 0.9510 95.10%
CYP1A2 inhibition - 0.7386 73.86%
CYP2C8 inhibition - 0.6182 61.82%
CYP inhibitory promiscuity - 0.9629 96.29%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5701 57.01%
Eye corrosion - 0.9936 99.36%
Eye irritation - 0.9761 97.61%
Skin irritation - 0.5656 56.56%
Skin corrosion - 0.8835 88.35%
Ames mutagenesis - 0.6900 69.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6480 64.80%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.6371 63.71%
skin sensitisation - 0.9169 91.69%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.6454 64.54%
Acute Oral Toxicity (c) I 0.4280 42.80%
Estrogen receptor binding + 0.9436 94.36%
Androgen receptor binding + 0.7532 75.32%
Thyroid receptor binding + 0.5606 56.06%
Glucocorticoid receptor binding + 0.7832 78.32%
Aromatase binding + 0.7663 76.63%
PPAR gamma + 0.5610 56.10%
Honey bee toxicity - 0.8310 83.10%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 0.9842 98.42%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.18% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.05% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.67% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.60% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.55% 94.45%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.61% 100.00%
CHEMBL4208 P20618 Proteasome component C5 89.35% 90.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.20% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.01% 89.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.46% 95.89%
CHEMBL3922 P50579 Methionine aminopeptidase 2 85.75% 97.28%
CHEMBL3492 P49721 Proteasome Macropain subunit 83.21% 90.24%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.47% 99.23%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.45% 93.04%
CHEMBL2581 P07339 Cathepsin D 80.26% 98.95%

Cross-Links

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PubChem 259577
NPASS NPC184555
LOTUS LTS0164384
wikiData Q76085451