Glycyrrhizin

Details

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Internal ID daf53057-4edb-48fe-8d11-6133d266a392
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3S,4S,5R,6R)-6-[(2S,3R,4S,5S,6S)-2-[[(3S,4aR,6aR,6bS,8aS,11S,12aR,14aR,14bS)-11-carboxy-4,4,6a,6b,8a,11,14b-heptamethyl-14-oxo-2,3,4a,5,6,7,8,9,10,12,12a,14a-dodecahydro-1H-picen-3-yl]oxy]-6-carboxy-4,5-dihydroxyoxan-3-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid
SMILES (Canonical) CC1(C2CCC3(C(C2(CCC1OC4C(C(C(C(O4)C(=O)O)O)O)OC5C(C(C(C(O5)C(=O)O)O)O)O)C)C(=O)C=C6C3(CCC7(C6CC(CC7)(C)C(=O)O)C)C)C)C
SMILES (Isomeric) C[C@]12CC[C@](C[C@H]1C3=CC(=O)[C@@H]4[C@]5(CC[C@@H](C([C@@H]5CC[C@]4([C@@]3(CC2)C)C)(C)C)O[C@@H]6[C@@H]([C@H]([C@@H]([C@H](O6)C(=O)O)O)O)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)C(=O)O)O)O)O)C)(C)C(=O)O
InChI InChI=1S/C42H62O16/c1-37(2)21-8-11-42(7)31(20(43)16-18-19-17-39(4,36(53)54)13-12-38(19,3)14-15-41(18,42)6)40(21,5)10-9-22(37)55-35-30(26(47)25(46)29(57-35)33(51)52)58-34-27(48)23(44)24(45)28(56-34)32(49)50/h16,19,21-31,34-35,44-48H,8-15,17H2,1-7H3,(H,49,50)(H,51,52)(H,53,54)/t19-,21-,22-,23-,24-,25-,26-,27+,28-,29-,30+,31+,34-,35-,38+,39-,40-,41+,42+/m0/s1
InChI Key LPLVUJXQOOQHMX-QWBHMCJMSA-N
Popularity 4,403 references in papers

Physical and Chemical Properties

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Molecular Formula C42H62O16
Molecular Weight 822.90 g/mol
Exact Mass 822.40378589 g/mol
Topological Polar Surface Area (TPSA) 267.00 Ų
XlogP 3.70
Atomic LogP (AlogP) 2.25
H-Bond Acceptor 13
H-Bond Donor 8
Rotatable Bonds 7

Synonyms

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glycyrrhizin
1405-86-3
Glycyrrhizinic acid
Glycyron
Glycyrrhetinic acid glycoside
potenlini
Glizigen
Glycyrrizin
glycyrrhizate
glyzyrrhizin
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Glycyrrhizin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8728 87.28%
Caco-2 - 0.8793 87.93%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.8383 83.83%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior - 0.4761 47.61%
OATP1B3 inhibitior - 0.3963 39.63%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior + 0.6929 69.29%
BSEP inhibitior + 0.6059 60.59%
P-glycoprotein inhibitior + 0.7608 76.08%
P-glycoprotein substrate - 0.7951 79.51%
CYP3A4 substrate + 0.7215 72.15%
CYP2C9 substrate - 0.7908 79.08%
CYP2D6 substrate - 0.8981 89.81%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition - 0.8692 86.92%
CYP2C19 inhibition - 0.9112 91.12%
CYP2D6 inhibition - 0.9423 94.23%
CYP1A2 inhibition - 0.8358 83.58%
CYP2C8 inhibition + 0.6827 68.27%
CYP inhibitory promiscuity - 0.9568 95.68%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6106 61.06%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9082 90.82%
Skin irritation - 0.5295 52.95%
Skin corrosion - 0.9236 92.36%
Ames mutagenesis - 0.9000 90.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4544 45.44%
Micronuclear - 0.7000 70.00%
Hepatotoxicity + 0.6908 69.08%
skin sensitisation - 0.8115 81.15%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity + 0.4867 48.67%
Acute Oral Toxicity (c) IV 0.6130 61.30%
Estrogen receptor binding + 0.7736 77.36%
Androgen receptor binding + 0.7324 73.24%
Thyroid receptor binding - 0.8319 83.19%
Glucocorticoid receptor binding + 0.7152 71.52%
Aromatase binding + 0.6753 67.53%
PPAR gamma + 0.7700 77.00%
Honey bee toxicity - 0.7043 70.43%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.9886 98.86%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL4235 P28845 11-beta-hydroxysteroid dehydrogenase 1 10 nM
18.6 nM
6 nM
6 nM
IC50
IC50
IC50
IC50
PMID: 19564108
PMID: 22148241
PMID: 22360639
via Super-PRED
CHEMBL3746 P80365 11-beta-hydroxysteroid dehydrogenase 2 1 nM
0.7 nM
0.4 nM
0.4 nM
IC50
IC50
IC50
IC50
PMID: 19564108
PMID: 22148241
PMID: 22360639
via Super-PRED
CHEMBL1697668 Q9Y6L6 Solute carrier organic anion transporter family member 1B1 15900 nM
Ki
PMID: 12963436
CHEMBL1743121 Q9NPD5 Solute carrier organic anion transporter family member 1B3 12500 nM
Ki
PMID: 12963436

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.50% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.87% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.08% 94.45%
CHEMBL221 P23219 Cyclooxygenase-1 91.01% 90.17%
CHEMBL3714130 P46095 G-protein coupled receptor 6 90.76% 97.36%
CHEMBL1951 P21397 Monoamine oxidase A 90.37% 91.49%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.94% 95.89%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 88.22% 96.09%
CHEMBL2581 P07339 Cathepsin D 87.28% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.35% 99.23%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 84.00% 93.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.34% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.48% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.60% 86.33%
CHEMBL5255 O00206 Toll-like receptor 4 81.43% 92.50%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.36% 92.94%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Abrus precatorius
Glycyrrhiza
Glycyrrhiza aspera
Glycyrrhiza glabra
Glycyrrhiza inflata
Glycyrrhiza uralensis
Glycyrrhiza uralensis
Mitracarpus hirtus
Rheum officinale
Rheum palmatum
Rheum tanguticum
Tetradium ruticarpum

Cross-Links

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PubChem 14982
NPASS NPC202666
ChEMBL CHEMBL441687
LOTUS LTS0121878
wikiData Q418705