Gentisin

Details

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Internal ID f89026b2-d223-4bd7-8dd2-1ce5e76236f9
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 1,7-dihydroxy-3-methoxyxanthen-9-one
SMILES (Canonical) COC1=CC(=C2C(=C1)OC3=C(C2=O)C=C(C=C3)O)O
SMILES (Isomeric) COC1=CC(=C2C(=C1)OC3=C(C2=O)C=C(C=C3)O)O
InChI InChI=1S/C14H10O5/c1-18-8-5-10(16)13-12(6-8)19-11-3-2-7(15)4-9(11)14(13)17/h2-6,15-16H,1H3
InChI Key XOXYHGOIRWABTC-UHFFFAOYSA-N
Popularity 149 references in papers

Physical and Chemical Properties

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Molecular Formula C14H10O5
Molecular Weight 258.23 g/mol
Exact Mass 258.05282342 g/mol
Topological Polar Surface Area (TPSA) 76.00 Ų
XlogP 2.80
Atomic LogP (AlogP) 2.37
H-Bond Acceptor 5
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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437-50-3
Gentianin
Gentisine
1,7-dihydroxy-3-methoxy-9H-xanthen-9-one
GENTIANIC ACID
1,7-Dihydroxy-3-methoxyxanthen-9-one
1,7-Dihydroxy-3-methoxyxanthone
4,7-Dihydroxy-2-methoxyxanthone
9H-Xanthen-9-one, 1,7-dihydroxy-3-methoxy-
CCRIS 3151
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Gentisin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9821 98.21%
Caco-2 + 0.6563 65.63%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Mitochondria 0.7391 73.91%
OATP2B1 inhibitior - 0.7032 70.32%
OATP1B1 inhibitior + 0.8640 86.40%
OATP1B3 inhibitior + 0.9964 99.64%
MATE1 inhibitior + 0.5400 54.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.7838 78.38%
P-glycoprotein inhibitior - 0.7106 71.06%
P-glycoprotein substrate - 0.8328 83.28%
CYP3A4 substrate - 0.5000 50.00%
CYP2C9 substrate - 0.6401 64.01%
CYP2D6 substrate - 0.8296 82.96%
CYP3A4 inhibition + 0.5974 59.74%
CYP2C9 inhibition + 0.6613 66.13%
CYP2C19 inhibition + 0.7599 75.99%
CYP2D6 inhibition - 0.7807 78.07%
CYP1A2 inhibition + 0.9767 97.67%
CYP2C8 inhibition - 0.5813 58.13%
CYP inhibitory promiscuity + 0.5931 59.31%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9113 91.13%
Carcinogenicity (trinary) Non-required 0.4883 48.83%
Eye corrosion - 0.9342 93.42%
Eye irritation + 0.9473 94.73%
Skin irritation - 0.6013 60.13%
Skin corrosion - 0.9822 98.22%
Ames mutagenesis + 0.9900 99.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7460 74.60%
Micronuclear + 0.8400 84.00%
Hepatotoxicity - 0.5625 56.25%
skin sensitisation - 0.9619 96.19%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.7754 77.54%
Acute Oral Toxicity (c) III 0.8902 89.02%
Estrogen receptor binding + 0.7401 74.01%
Androgen receptor binding + 0.8873 88.73%
Thyroid receptor binding + 0.6208 62.08%
Glucocorticoid receptor binding + 0.8980 89.80%
Aromatase binding + 0.8790 87.90%
PPAR gamma + 0.8188 81.88%
Honey bee toxicity - 0.9110 91.10%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.7205 72.05%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.73% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.81% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.38% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.43% 94.45%
CHEMBL2581 P07339 Cathepsin D 91.89% 98.95%
CHEMBL3192 Q9BY41 Histone deacetylase 8 91.32% 93.99%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 90.12% 99.15%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.66% 99.23%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 89.26% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.10% 89.00%
CHEMBL2535 P11166 Glucose transporter 88.06% 98.75%
CHEMBL3401 O75469 Pregnane X receptor 86.97% 94.73%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 84.55% 93.65%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.01% 99.17%
CHEMBL1951 P21397 Monoamine oxidase A 83.38% 91.49%
CHEMBL3194 P02766 Transthyretin 82.67% 90.71%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.58% 86.33%

Cross-Links

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PubChem 5281636
NPASS NPC188167
LOTUS LTS0033272
wikiData Q27106720