Deoxyshikonin

Details

Top
Internal ID ca2c96c3-0a05-49ca-a59c-7fd5c06b81bd
Taxonomy Benzenoids > Naphthalenes > Naphthoquinones
IUPAC Name 5,8-dihydroxy-2-(4-methylpent-3-enyl)naphthalene-1,4-dione
SMILES (Canonical) CC(=CCCC1=CC(=O)C2=C(C=CC(=C2C1=O)O)O)C
SMILES (Isomeric) CC(=CCCC1=CC(=O)C2=C(C=CC(=C2C1=O)O)O)C
InChI InChI=1S/C16H16O4/c1-9(2)4-3-5-10-8-13(19)14-11(17)6-7-12(18)15(14)16(10)20/h4,6-8,17-18H,3,5H2,1-2H3
InChI Key VOMDIEGPEURZJO-UHFFFAOYSA-N
Popularity 58 references in papers

Physical and Chemical Properties

Top
Molecular Formula C16H16O4
Molecular Weight 272.29 g/mol
Exact Mass 272.10485899 g/mol
Topological Polar Surface Area (TPSA) 74.60 Ų
XlogP 4.10
Atomic LogP (AlogP) 3.15
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

Top
43043-74-9
Arnebin 7
UNII-X908DXC99I
5,8-dihydroxy-2-(4-methylpent-3-enyl)naphthalene-1,4-dione
NSC 179184
X908DXC99I
1,4-Naphthalenedione, 5,8-dihydroxy-2-(4-methyl-3-pentenyl)-
DTXSID80195660
NSC-179184
C18133
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of Deoxyshikonin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9957 99.57%
Caco-2 + 0.6999 69.99%
Blood Brain Barrier + 0.5250 52.50%
Human oral bioavailability + 0.5714 57.14%
Subcellular localzation Mitochondria 0.8715 87.15%
OATP2B1 inhibitior - 0.7110 71.10%
OATP1B1 inhibitior + 0.9207 92.07%
OATP1B3 inhibitior + 0.9304 93.04%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.7287 72.87%
BSEP inhibitior - 0.5262 52.62%
P-glycoprotein inhibitior - 0.9261 92.61%
P-glycoprotein substrate - 0.9270 92.70%
CYP3A4 substrate - 0.5578 55.78%
CYP2C9 substrate - 0.7953 79.53%
CYP2D6 substrate - 0.8456 84.56%
CYP3A4 inhibition - 0.7877 78.77%
CYP2C9 inhibition + 0.9069 90.69%
CYP2C19 inhibition + 0.6452 64.52%
CYP2D6 inhibition - 0.6265 62.65%
CYP1A2 inhibition + 0.8934 89.34%
CYP2C8 inhibition - 0.9240 92.40%
CYP inhibitory promiscuity + 0.8133 81.33%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8540 85.40%
Carcinogenicity (trinary) Non-required 0.6563 65.63%
Eye corrosion - 0.9891 98.91%
Eye irritation + 0.7198 71.98%
Skin irritation - 0.6166 61.66%
Skin corrosion - 0.8769 87.69%
Ames mutagenesis + 0.7000 70.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7054 70.54%
Micronuclear - 0.6300 63.00%
Hepatotoxicity + 0.6625 66.25%
skin sensitisation + 0.5471 54.71%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity + 0.6785 67.85%
Acute Oral Toxicity (c) III 0.7558 75.58%
Estrogen receptor binding + 0.6642 66.42%
Androgen receptor binding + 0.6772 67.72%
Thyroid receptor binding - 0.6321 63.21%
Glucocorticoid receptor binding + 0.8326 83.26%
Aromatase binding + 0.6788 67.88%
PPAR gamma + 0.9171 91.71%
Honey bee toxicity - 0.9142 91.42%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity + 0.9967 99.67%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.12% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.69% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.13% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.44% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 89.95% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.04% 86.33%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 80.13% 96.37%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Alkanna cappadocica
Alkanna hirsutissima
Arnebia decumbens
Arnebia euchroma
Arnebia guttata
Arnebia hispidissima
Eucalyptus coccifera
Lithospermum erythrorhizon
Rhizomnium magnifolium
Schisandra chinensis
Schisandra rubriflora
Schisandra sphenanthera

Cross-Links

Top
PubChem 98914
NPASS NPC306765
ChEMBL CHEMBL486627
LOTUS LTS0008274
wikiData Q27155446