2-[3beta-(Hydroxymethyl)-2alpha-(4-hydroxy-3,5-dimethoxyphenyl)-2,3-dihydro-1,4-benzodioxin-6-yl]-5,7-dihydroxy-4H-1-benzopyran-4-one

Details

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Internal ID 4b1e16d4-2386-4845-a325-468eaa6596a1
Taxonomy Lignans, neolignans and related compounds > Flavonolignans
IUPAC Name 5,7-dihydroxy-2-[(2R,3R)-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-(hydroxymethyl)-2,3-dihydro-1,4-benzodioxin-6-yl]chromen-4-one
SMILES (Canonical) COC1=CC(=CC(=C1O)OC)C2C(OC3=C(O2)C=CC(=C3)C4=CC(=O)C5=C(C=C(C=C5O4)O)O)CO
SMILES (Isomeric) COC1=CC(=CC(=C1O)OC)[C@@H]2[C@H](OC3=C(O2)C=CC(=C3)C4=CC(=O)C5=C(C=C(C=C5O4)O)O)CO
InChI InChI=1S/C26H22O10/c1-32-21-6-13(7-22(33-2)25(21)31)26-23(11-27)35-19-5-12(3-4-17(19)36-26)18-10-16(30)24-15(29)8-14(28)9-20(24)34-18/h3-10,23,26-29,31H,11H2,1-2H3/t23-,26-/m1/s1
InChI Key LWFJEGQUKUEIRY-ZEQKJWHPSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C26H22O10
Molecular Weight 494.40 g/mol
Exact Mass 494.12129689 g/mol
Topological Polar Surface Area (TPSA) 144.00 Ų
XlogP 3.20
Atomic LogP (AlogP) 3.47
H-Bond Acceptor 10
H-Bond Donor 4
Rotatable Bonds 5

Synonyms

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2-[3beta-(Hydroxymethyl)-2alpha-(4-hydroxy-3,5-dimethoxyphenyl)-2,3-dihydro-1,4-benzodioxin-6-yl]-5,7-dihydroxy-4H-1-benzopyran-4-one

2D Structure

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2D Structure of 2-[3beta-(Hydroxymethyl)-2alpha-(4-hydroxy-3,5-dimethoxyphenyl)-2,3-dihydro-1,4-benzodioxin-6-yl]-5,7-dihydroxy-4H-1-benzopyran-4-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8920 89.20%
Caco-2 - 0.7744 77.44%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.6861 68.61%
OATP2B1 inhibitior - 0.5676 56.76%
OATP1B1 inhibitior + 0.8529 85.29%
OATP1B3 inhibitior + 0.8028 80.28%
MATE1 inhibitior - 0.6200 62.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.9325 93.25%
P-glycoprotein inhibitior + 0.8579 85.79%
P-glycoprotein substrate - 0.6097 60.97%
CYP3A4 substrate + 0.6355 63.55%
CYP2C9 substrate - 0.6235 62.35%
CYP2D6 substrate - 0.8293 82.93%
CYP3A4 inhibition + 0.5840 58.40%
CYP2C9 inhibition - 0.5103 51.03%
CYP2C19 inhibition - 0.6396 63.96%
CYP2D6 inhibition - 0.8997 89.97%
CYP1A2 inhibition - 0.8073 80.73%
CYP2C8 inhibition + 0.8156 81.56%
CYP inhibitory promiscuity + 0.7172 71.72%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7419 74.19%
Eye corrosion - 0.9848 98.48%
Eye irritation - 0.8553 85.53%
Skin irritation - 0.8151 81.51%
Skin corrosion - 0.9618 96.18%
Ames mutagenesis - 0.6064 60.64%
Human Ether-a-go-go-Related Gene inhibition + 0.6954 69.54%
Micronuclear + 0.6859 68.59%
Hepatotoxicity + 0.5375 53.75%
skin sensitisation - 0.8863 88.63%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.7484 74.84%
Acute Oral Toxicity (c) III 0.7088 70.88%
Estrogen receptor binding + 0.8529 85.29%
Androgen receptor binding + 0.7943 79.43%
Thyroid receptor binding + 0.6493 64.93%
Glucocorticoid receptor binding + 0.8418 84.18%
Aromatase binding + 0.5332 53.32%
PPAR gamma + 0.7778 77.78%
Honey bee toxicity - 0.7111 71.11%
Biodegradation - 0.9500 95.00%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity - 0.4617 46.17%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.41% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 99.04% 85.14%
CHEMBL2581 P07339 Cathepsin D 96.82% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.90% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.35% 89.00%
CHEMBL3194 P02766 Transthyretin 93.34% 90.71%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.31% 96.09%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 92.97% 86.92%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.63% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.49% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.25% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.61% 97.09%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.34% 99.15%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 83.25% 95.78%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.22% 99.17%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.95% 99.23%
CHEMBL3401 O75469 Pregnane X receptor 81.98% 94.73%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.64% 97.14%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.08% 92.62%

Cross-Links

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PubChem 10791345
NPASS NPC288131
LOTUS LTS0052428
wikiData Q105158252