(2R,3S,4S)-2-(hydroxymethyl)-5-(hydroxymethylidene)oxolane-3,4-diol

Details

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Internal ID 6142498f-8d72-440e-b13c-bd9c9d8d2413
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Monosaccharides
IUPAC Name (2R,3S,4S)-2-(hydroxymethyl)-5-(hydroxymethylidene)oxolane-3,4-diol
SMILES (Canonical) C(C1C(C(C(=CO)O1)O)O)O
SMILES (Isomeric) C([C@@H]1[C@H]([C@@H](C(=CO)O1)O)O)O
InChI InChI=1S/C6H10O5/c7-1-3-5(9)6(10)4(2-8)11-3/h1,4-10H,2H2/t4-,5-,6-/m1/s1
InChI Key FZRJRIPXNVGOHZ-HSUXUTPPSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C6H10O5
Molecular Weight 162.14 g/mol
Exact Mass 162.05282342 g/mol
Topological Polar Surface Area (TPSA) 90.20 Ų
XlogP -1.10
Atomic LogP (AlogP) -1.50
H-Bond Acceptor 5
H-Bond Donor 4
Rotatable Bonds 1

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S)-2-(hydroxymethyl)-5-(hydroxymethylidene)oxolane-3,4-diol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5599 55.99%
Caco-2 - 0.9578 95.78%
Blood Brain Barrier + 0.7750 77.50%
Human oral bioavailability + 0.6714 67.14%
Subcellular localzation Mitochondria 0.6083 60.83%
OATP2B1 inhibitior - 0.8587 85.87%
OATP1B1 inhibitior + 0.9137 91.37%
OATP1B3 inhibitior + 0.9708 97.08%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.9847 98.47%
P-glycoprotein inhibitior - 0.9746 97.46%
P-glycoprotein substrate - 0.9731 97.31%
CYP3A4 substrate - 0.6710 67.10%
CYP2C9 substrate - 0.8136 81.36%
CYP2D6 substrate - 0.8173 81.73%
CYP3A4 inhibition - 0.9709 97.09%
CYP2C9 inhibition - 0.9168 91.68%
CYP2C19 inhibition - 0.9024 90.24%
CYP2D6 inhibition - 0.9402 94.02%
CYP1A2 inhibition - 0.8234 82.34%
CYP2C8 inhibition - 0.9717 97.17%
CYP inhibitory promiscuity - 0.7973 79.73%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6254 62.54%
Eye corrosion - 0.9814 98.14%
Eye irritation - 0.8152 81.52%
Skin irritation - 0.7512 75.12%
Skin corrosion - 0.8892 88.92%
Ames mutagenesis - 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7536 75.36%
Micronuclear - 0.7600 76.00%
Hepatotoxicity - 0.5824 58.24%
skin sensitisation - 0.8753 87.53%
Respiratory toxicity - 0.8111 81.11%
Reproductive toxicity + 0.5111 51.11%
Mitochondrial toxicity - 0.6875 68.75%
Nephrotoxicity + 0.5155 51.55%
Acute Oral Toxicity (c) IV 0.5072 50.72%
Estrogen receptor binding - 0.7893 78.93%
Androgen receptor binding - 0.8725 87.25%
Thyroid receptor binding - 0.7316 73.16%
Glucocorticoid receptor binding - 0.7527 75.27%
Aromatase binding - 0.8160 81.60%
PPAR gamma - 0.7625 76.25%
Honey bee toxicity - 0.7675 76.75%
Biodegradation + 0.5500 55.00%
Crustacea aquatic toxicity - 0.7600 76.00%
Fish aquatic toxicity - 0.8066 80.66%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 88.59% 86.92%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 87.20% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 85.81% 96.09%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Camptotheca acuminata
Codonopsis pilosula
Fagopyrum esculentum
Levisticum officinale
Malus pumila
Morus alba
Panax ginseng
Pyrus communis
Scrophularia ningpoensis
Taraxacum officinale

Cross-Links

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PubChem 56947165
NPASS NPC1507