Stachybotrin C

Details

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Internal ID c1baf016-630a-4d89-aa8e-c0de36e694b3
Taxonomy Organoheterocyclic compounds > Isoindoles and derivatives > Isoindolines > Isoindolones
IUPAC Name (2R,3R)-2-[(3E)-4,8-dimethylnona-3,7-dienyl]-3,5-dihydroxy-8-[2-(4-hydroxyphenyl)ethyl]-2-methyl-4,9-dihydro-3H-pyrano[2,3-e]isoindol-7-one
SMILES (Canonical) CC(=CCCC(=CCCC1(C(CC2=C(C=C3C(=C2O1)CN(C3=O)CCC4=CC=C(C=C4)O)O)O)C)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CC[C@@]1([C@@H](CC2=C(C=C3C(=C2O1)CN(C3=O)CCC4=CC=C(C=C4)O)O)O)C)/C)C
InChI InChI=1S/C31H39NO5/c1-20(2)7-5-8-21(3)9-6-15-31(4)28(35)18-25-27(34)17-24-26(29(25)37-31)19-32(30(24)36)16-14-22-10-12-23(33)13-11-22/h7,9-13,17,28,33-35H,5-6,8,14-16,18-19H2,1-4H3/b21-9+/t28-,31-/m1/s1
InChI Key VXPNPWUFHMIFJE-LCVDRPHOSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C31H39NO5
Molecular Weight 505.60 g/mol
Exact Mass 505.28282334 g/mol
Topological Polar Surface Area (TPSA) 90.20 Ų
XlogP 6.00
Atomic LogP (AlogP) 5.82
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 9

Synonyms

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(2R,3R)-2-[(3E)-4,8-dimethylnona-3,7-dienyl]-3,5-dihydroxy-8-[2-(4-hydroxyphenyl)ethyl]-2-methyl-4,9-dihydro-3H-pyrano[2,3-e]isoindol-7-one

2D Structure

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2D Structure of Stachybotrin C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9767 97.67%
Caco-2 - 0.7577 75.77%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.5848 58.48%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8266 82.66%
OATP1B3 inhibitior + 0.9327 93.27%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.9566 95.66%
P-glycoprotein inhibitior + 0.8314 83.14%
P-glycoprotein substrate + 0.6676 66.76%
CYP3A4 substrate + 0.6976 69.76%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7740 77.40%
CYP3A4 inhibition - 0.7892 78.92%
CYP2C9 inhibition - 0.8867 88.67%
CYP2C19 inhibition - 0.7957 79.57%
CYP2D6 inhibition - 0.9108 91.08%
CYP1A2 inhibition - 0.8666 86.66%
CYP2C8 inhibition + 0.6393 63.93%
CYP inhibitory promiscuity - 0.9378 93.78%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.4804 48.04%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9165 91.65%
Skin irritation - 0.7829 78.29%
Skin corrosion - 0.9294 92.94%
Ames mutagenesis - 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6768 67.68%
Micronuclear + 0.6300 63.00%
Hepatotoxicity - 0.5375 53.75%
skin sensitisation - 0.8529 85.29%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 1.0000 100.00%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity - 0.6192 61.92%
Acute Oral Toxicity (c) III 0.6215 62.15%
Estrogen receptor binding + 0.8041 80.41%
Androgen receptor binding + 0.7632 76.32%
Thyroid receptor binding - 0.5273 52.73%
Glucocorticoid receptor binding + 0.6860 68.60%
Aromatase binding + 0.5567 55.67%
PPAR gamma + 0.7463 74.63%
Honey bee toxicity - 0.6425 64.25%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.6600 66.00%
Fish aquatic toxicity + 0.9714 97.14%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.37% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.98% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.30% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.37% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.88% 86.33%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 93.55% 93.40%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.31% 95.56%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 91.24% 92.08%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.23% 89.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 88.73% 90.71%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.50% 99.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 88.06% 97.25%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 87.95% 85.11%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.73% 95.89%
CHEMBL233 P35372 Mu opioid receptor 87.27% 97.93%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 86.83% 96.95%
CHEMBL3401 O75469 Pregnane X receptor 85.62% 94.73%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 85.14% 85.00%
CHEMBL4208 P20618 Proteasome component C5 83.35% 90.00%
CHEMBL2535 P11166 Glucose transporter 82.52% 98.75%
CHEMBL4940 P07195 L-lactate dehydrogenase B chain 80.07% 95.53%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Artocarpus integer
Calophyllum brasiliense
Endodesmia calophylloides
Garcinia dulcis
Garcinia gardneriana
Garcinia intermedia
Garcinia mangostana
Garcinia merguensis
Garcinia nigrolineata
Maclura tinctoria

Cross-Links

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PubChem 10368882
LOTUS LTS0095157
wikiData Q105217744