Sophodibenzoside A

Details

Top
Internal ID 5b14d1c1-4b7e-454a-b1b2-cc72353816d2
Taxonomy Phenylpropanoids and polyketides > Stilbenes > Stilbene glycosides
IUPAC Name 1-[4-[(2S,3R,4S,5S,6R)-6-[[(2R,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-2-hydroxyphenyl]-2-(3-hydroxy-4-methoxyphenyl)ethane-1,2-dione
SMILES (Canonical) COC1=C(C=C(C=C1)C(=O)C(=O)C2=C(C=C(C=C2)OC3C(C(C(C(O3)COC4C(C(CO4)(CO)O)O)O)O)O)O)O
SMILES (Isomeric) COC1=C(C=C(C=C1)C(=O)C(=O)C2=C(C=C(C=C2)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO[C@H]4[C@@H]([C@](CO4)(CO)O)O)O)O)O)O)O
InChI InChI=1S/C26H30O15/c1-37-16-5-2-11(6-15(16)29)18(30)19(31)13-4-3-12(7-14(13)28)40-24-22(34)21(33)20(32)17(41-24)8-38-25-23(35)26(36,9-27)10-39-25/h2-7,17,20-25,27-29,32-36H,8-10H2,1H3/t17-,20-,21+,22-,23+,24-,25-,26-/m1/s1
InChI Key BHUYSRSLUYYMHB-JEQMPJCPSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C26H30O15
Molecular Weight 582.50 g/mol
Exact Mass 582.15847025 g/mol
Topological Polar Surface Area (TPSA) 242.00 Ų
XlogP -1.20
Atomic LogP (AlogP) -2.18
H-Bond Acceptor 15
H-Bond Donor 8
Rotatable Bonds 10

Synonyms

Top
CHEMBL3092851

2D Structure

Top
2D Structure of Sophodibenzoside A

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7085 70.85%
Caco-2 - 0.8983 89.83%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.6842 68.42%
OATP2B1 inhibitior - 0.8500 85.00%
OATP1B1 inhibitior + 0.9238 92.38%
OATP1B3 inhibitior + 0.9559 95.59%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.7620 76.20%
P-glycoprotein inhibitior - 0.5133 51.33%
P-glycoprotein substrate + 0.5167 51.67%
CYP3A4 substrate + 0.6510 65.10%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8509 85.09%
CYP3A4 inhibition - 0.8703 87.03%
CYP2C9 inhibition - 0.8749 87.49%
CYP2C19 inhibition - 0.8697 86.97%
CYP2D6 inhibition - 0.9294 92.94%
CYP1A2 inhibition - 0.8925 89.25%
CYP2C8 inhibition + 0.7595 75.95%
CYP inhibitory promiscuity - 0.9089 90.89%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6149 61.49%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.9164 91.64%
Skin irritation - 0.8447 84.47%
Skin corrosion - 0.9498 94.98%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4651 46.51%
Micronuclear - 0.5526 55.26%
Hepatotoxicity - 0.7625 76.25%
skin sensitisation - 0.8581 85.81%
Respiratory toxicity - 0.6000 60.00%
Reproductive toxicity + 0.7111 71.11%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.6477 64.77%
Acute Oral Toxicity (c) III 0.6944 69.44%
Estrogen receptor binding + 0.7945 79.45%
Androgen receptor binding - 0.4902 49.02%
Thyroid receptor binding - 0.5381 53.81%
Glucocorticoid receptor binding - 0.4806 48.06%
Aromatase binding + 0.6162 61.62%
PPAR gamma + 0.7040 70.40%
Honey bee toxicity - 0.8050 80.50%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity + 0.7614 76.14%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.74% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.41% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.31% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.07% 94.00%
CHEMBL4208 P20618 Proteasome component C5 92.94% 90.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.37% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.92% 95.56%
CHEMBL241 Q14432 Phosphodiesterase 3A 91.29% 92.94%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.69% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.55% 95.89%
CHEMBL2535 P11166 Glucose transporter 89.92% 98.75%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 88.56% 91.07%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.28% 89.00%
CHEMBL6175 Q9H3R0 Lysine-specific demethylase 4C 87.93% 96.69%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.84% 96.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 84.69% 97.36%
CHEMBL2581 P07339 Cathepsin D 84.06% 98.95%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.86% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.66% 97.14%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.46% 95.83%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.33% 94.33%
CHEMBL4581 P52732 Kinesin-like protein 1 82.32% 93.18%
CHEMBL226 P30542 Adenosine A1 receptor 82.28% 95.93%

Cross-Links

Top
PubChem 73603983
NPASS NPC212748