Isodomoic acid D

Details

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Internal ID 752f6384-00d6-411d-8721-5b23105a243b
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Amino acids and derivatives > Kainoids
IUPAC Name (2S,3S,4S)-4-[(2Z,4Z,6R)-6-carboxyhepta-2,4-dien-2-yl]-3-(carboxymethyl)pyrrolidine-2-carboxylic acid
SMILES (Canonical) CC(C=CC=C(C)C1CNC(C1CC(=O)O)C(=O)O)C(=O)O
SMILES (Isomeric) C[C@H](/C=C\C=C(\C)/[C@H]1CN[C@@H]([C@H]1CC(=O)O)C(=O)O)C(=O)O
InChI InChI=1S/C15H21NO6/c1-8(4-3-5-9(2)14(19)20)11-7-16-13(15(21)22)10(11)6-12(17)18/h3-5,9-11,13,16H,6-7H2,1-2H3,(H,17,18)(H,19,20)(H,21,22)/b5-3-,8-4-/t9-,10+,11-,13+/m1/s1
InChI Key VZFRNCSOCOPNDB-PQKHEMERSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C15H21NO6
Molecular Weight 311.33 g/mol
Exact Mass 311.13688739 g/mol
Topological Polar Surface Area (TPSA) 124.00 Ų
XlogP -1.30
Atomic LogP (AlogP) 0.97
H-Bond Acceptor 4
H-Bond Donor 4
Rotatable Bonds 7

Synonyms

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(Z,Z)-Isodomoic acid
101977-26-8
ISODOMOICACIDD

2D Structure

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2D Structure of Isodomoic acid D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9086 90.86%
Caco-2 - 0.7579 75.79%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.7092 70.92%
OATP2B1 inhibitior - 0.8594 85.94%
OATP1B1 inhibitior + 0.8838 88.38%
OATP1B3 inhibitior + 0.9423 94.23%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.8250 82.50%
P-glycoprotein inhibitior - 0.9538 95.38%
P-glycoprotein substrate - 0.6901 69.01%
CYP3A4 substrate - 0.5201 52.01%
CYP2C9 substrate - 0.5976 59.76%
CYP2D6 substrate - 0.8117 81.17%
CYP3A4 inhibition - 0.9855 98.55%
CYP2C9 inhibition - 0.9130 91.30%
CYP2C19 inhibition - 0.9180 91.80%
CYP2D6 inhibition - 0.9230 92.30%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition - 0.8818 88.18%
CYP inhibitory promiscuity - 0.9836 98.36%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9000 90.00%
Carcinogenicity (trinary) Non-required 0.6527 65.27%
Eye corrosion - 0.9793 97.93%
Eye irritation - 0.9819 98.19%
Skin irritation - 0.7646 76.46%
Skin corrosion - 0.9238 92.38%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6492 64.92%
Micronuclear - 0.5300 53.00%
Hepatotoxicity - 0.5125 51.25%
skin sensitisation - 0.8557 85.57%
Respiratory toxicity - 0.5778 57.78%
Reproductive toxicity + 0.5188 51.88%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.8828 88.28%
Acute Oral Toxicity (c) III 0.6011 60.11%
Estrogen receptor binding - 0.7344 73.44%
Androgen receptor binding - 0.7010 70.10%
Thyroid receptor binding - 0.6579 65.79%
Glucocorticoid receptor binding - 0.5924 59.24%
Aromatase binding - 0.5618 56.18%
PPAR gamma - 0.6929 69.29%
Honey bee toxicity - 0.8874 88.74%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.8600 86.00%
Fish aquatic toxicity + 0.8982 89.82%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293232 Q16637 Survival motor neuron protein 891.3 nM
Potency
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.09% 96.09%
CHEMBL2581 P07339 Cathepsin D 93.83% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.74% 94.45%
CHEMBL4072 P07858 Cathepsin B 88.97% 93.67%
CHEMBL3359 P21462 Formyl peptide receptor 1 88.18% 93.56%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.39% 97.25%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 85.29% 89.34%
CHEMBL268 P43235 Cathepsin K 84.84% 96.85%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 84.76% 96.47%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.25% 100.00%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 82.01% 93.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.79% 99.17%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 80.38% 91.11%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Anacyclus monanthos
Arum palaestinum
Astragalus siculus
Caulophyllum robustum
Corydalis balansae
Euphorbia cuneata
Guizotia scabra
Hakea trifurcata
Mikania cordifolia
Prunus speciosa
Raoulia australis
Senecio chionophilus
Terminalia brachystemma
Ulmus glabra

Cross-Links

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PubChem 6442551
NPASS NPC127045
LOTUS LTS0137956
wikiData Q104396356