Gambogenin dimethyl acetal

Details

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Internal ID 4d417978-396c-4855-b3c9-59986d799379
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name (1S,2S,13S,15R)-15-[(Z)-4,4-dimethoxy-3-methylbut-2-enyl]-7-[(2E)-3,7-dimethylocta-2,6-dienyl]-6,8-dihydroxy-17,17-dimethyl-5-(3-methylbut-2-enyl)-3,16-dioxapentacyclo[11.4.1.02,11.02,15.04,9]octadeca-4,6,8,11-tetraene-10,14-dione
SMILES (Canonical) CC(=CCCC(=CCC1=C(C(=C2C(=C1O)C(=O)C3=CC4CC5C3(O2)C(C4=O)(OC5(C)C)CC=C(C)C(OC)OC)CC=C(C)C)O)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CC1=C(C(=C2C(=C1O)C(=O)C3=C[C@@H]4C[C@@H]5[C@@]3(O2)[C@](C4=O)(OC5(C)C)C/C=C(/C)\C(OC)OC)CC=C(C)C)O)/C)C
InChI InChI=1S/C40H52O8/c1-22(2)12-11-13-24(5)15-17-27-32(41)28(16-14-23(3)4)35-31(33(27)42)34(43)29-20-26-21-30-38(7,8)48-39(36(26)44,40(29,30)47-35)19-18-25(6)37(45-9)46-10/h12,14-15,18,20,26,30,37,41-42H,11,13,16-17,19,21H2,1-10H3/b24-15+,25-18-/t26-,30+,39+,40-/m1/s1
InChI Key GGGKTEHQXPLSER-VNNBHQEGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C40H52O8
Molecular Weight 660.80 g/mol
Exact Mass 660.36621861 g/mol
Topological Polar Surface Area (TPSA) 112.00 Ų
XlogP 8.50
Atomic LogP (AlogP) 7.80
H-Bond Acceptor 8
H-Bond Donor 2
Rotatable Bonds 12

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Gambogenin dimethyl acetal

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9809 98.09%
Caco-2 - 0.7971 79.71%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.7535 75.35%
OATP2B1 inhibitior - 0.5673 56.73%
OATP1B1 inhibitior + 0.7569 75.69%
OATP1B3 inhibitior - 0.4437 44.37%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.9949 99.49%
P-glycoprotein inhibitior + 0.8430 84.30%
P-glycoprotein substrate + 0.5820 58.20%
CYP3A4 substrate + 0.7077 70.77%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8495 84.95%
CYP3A4 inhibition - 0.6680 66.80%
CYP2C9 inhibition - 0.6016 60.16%
CYP2C19 inhibition - 0.7174 71.74%
CYP2D6 inhibition - 0.8962 89.62%
CYP1A2 inhibition - 0.6391 63.91%
CYP2C8 inhibition + 0.6942 69.42%
CYP inhibitory promiscuity - 0.7350 73.50%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5387 53.87%
Eye corrosion - 0.9894 98.94%
Eye irritation - 0.8984 89.84%
Skin irritation - 0.7044 70.44%
Skin corrosion - 0.9292 92.92%
Ames mutagenesis + 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5242 52.42%
Micronuclear - 0.6700 67.00%
Hepatotoxicity - 0.6823 68.23%
skin sensitisation - 0.8395 83.95%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.6527 65.27%
Acute Oral Toxicity (c) I 0.4052 40.52%
Estrogen receptor binding + 0.8157 81.57%
Androgen receptor binding + 0.7649 76.49%
Thyroid receptor binding + 0.6308 63.08%
Glucocorticoid receptor binding + 0.8607 86.07%
Aromatase binding + 0.7623 76.23%
PPAR gamma + 0.7312 73.12%
Honey bee toxicity - 0.5609 56.09%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9961 99.61%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.74% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 97.39% 94.45%
CHEMBL2581 P07339 Cathepsin D 96.48% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.45% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.77% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.58% 97.09%
CHEMBL3401 O75469 Pregnane X receptor 90.50% 94.73%
CHEMBL215 P09917 Arachidonate 5-lipoxygenase 90.37% 92.68%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 89.20% 97.21%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.77% 99.23%
CHEMBL284 P27487 Dipeptidyl peptidase IV 87.13% 95.69%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.91% 85.14%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.62% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.50% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.81% 100.00%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 81.15% 85.30%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.80% 86.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.61% 96.00%
CHEMBL340 P08684 Cytochrome P450 3A4 80.00% 91.19%

Plants that contains it

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Cross-Links

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PubChem 10532388
NPASS NPC114031
LOTUS LTS0219678
wikiData Q105008031