Desrhamnosylverbascosaponin

Details

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Internal ID 0447b856-a5e4-490e-8814-719bfc62680c
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2R,3R,4S,5S,6R)-5-hydroxy-2-[[(1S,4S,5R,8R,9R,10S,13S,14R,17S,18R)-9-(hydroxymethyl)-4,5,9,13,20,20-hexamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracos-15-en-10-yl]oxy]-6-methyl-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OC2CCC3(C(C2(C)CO)CCC4(C3C=CC56C4(CCC7(C5CC(CC7)(C)C)CO6)C)C)C)OC8C(C(C(C(O8)CO)O)O)O)OC9C(C(C(C(O9)CO)O)O)O)O
SMILES (Isomeric) C[C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O[C@H]2CC[C@]3([C@H]([C@]2(C)CO)CC[C@@]4([C@@H]3C=C[C@@]56[C@]4(CC[C@@]7([C@H]5CC(CC7)(C)C)CO6)C)C)C)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O)O)O[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O)O)O
InChI InChI=1S/C48H78O17/c1-23-30(52)37(64-39-35(57)33(55)31(53)24(19-49)61-39)38(65-40-36(58)34(56)32(54)25(20-50)62-40)41(60-23)63-29-10-11-43(4)26(44(29,5)21-51)8-12-45(6)27(43)9-13-48-28-18-42(2,3)14-16-47(28,22-59-48)17-15-46(45,48)7/h9,13,23-41,49-58H,8,10-12,14-22H2,1-7H3/t23-,24-,25-,26-,27-,28-,29+,30+,31-,32-,33+,34+,35-,36-,37+,38-,39+,40+,41+,43+,44+,45-,46+,47-,48+/m1/s1
InChI Key GIJQICBKLQJFPY-CSBHDFSNSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C48H78O17
Molecular Weight 927.10 g/mol
Exact Mass 926.52390102 g/mol
Topological Polar Surface Area (TPSA) 267.00 Ų
XlogP 1.90
Atomic LogP (AlogP) 0.63
H-Bond Acceptor 17
H-Bond Donor 10
Rotatable Bonds 9

Synonyms

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E8W7XS4JWX
UNII-E8W7XS4JWX
186000-04-4
(3beta,4alpha)-13,28-Epoxy-23-hydroxyolean-11-en-3-yl o-beta-D-glucopyranosyl-(1->2)-O-(beta-D-glucopyranosyl-(1->3))-6-deoxy-beta-D-galactopyranoside
beta-D-Galactopyranoside, (3beta,4alpha)-13,28-epoxy-23-hydroxyolean-11-en-3-yl o-beta-D-glucopyranosyl-(1->2)-O-(beta-D-glucopyranosyl-(1->3))-6-deoxy-
(2S,3R,4S,5S,6R)-2-((2R,3R,4S,5S,6R)-5-HYDROXY-2-(((1S,4S,5R,8R,9R,10S,13S,14R,17S,18R)-9-(HYDROXYMETHYL)-4,5,9,13,20,20-HEXAMETHYL-24-OXAHEXACYCLO(15.5.2.01,18.04,17.05,14.08,13)TETRACOS-15-EN-10-YL)OXY)-6-METHYL-3-((2S,3R,4S,5S,6R)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)OXAN-2-YL)OXYOXAN-4-YL)OXY-6-(HYDROXYMETHYL)OXANE-3,4,5-TRIOL
(3.BETA.,4.ALPHA.)-13,28-EPOXY-23-HYDROXYOLEAN-11-EN-3-YL O-.BETA.-D-GLUCOPYRANOSYL-(1->2)-O-(.BETA.-D-GLUCOPYRANOSYL-(1->3))-6-DEOXY-.BETA.-D-GALACTOPYRANOSIDE
.BETA.-D-GALACTOPYRANOSIDE, (3.BETA.,4.ALPHA.)-13,28-EPOXY-23-HYDROXYOLEAN-11-EN-3-YL O-.BETA.-D-GLUCOPYRANOSYL-(1->2)-O-(.BETA.-D-GLUCOPYRANOSYL-(1->3))-6-DEOXY-

2D Structure

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2D Structure of Desrhamnosylverbascosaponin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5804 58.04%
Caco-2 - 0.8803 88.03%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.7179 71.79%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8337 83.37%
OATP1B3 inhibitior + 0.8941 89.41%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior - 0.4931 49.31%
P-glycoprotein inhibitior + 0.7484 74.84%
P-glycoprotein substrate - 0.5297 52.97%
CYP3A4 substrate + 0.7244 72.44%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8287 82.87%
CYP3A4 inhibition - 0.9600 96.00%
CYP2C9 inhibition - 0.8537 85.37%
CYP2C19 inhibition - 0.8470 84.70%
CYP2D6 inhibition - 0.9453 94.53%
CYP1A2 inhibition - 0.8953 89.53%
CYP2C8 inhibition + 0.6810 68.10%
CYP inhibitory promiscuity - 0.9105 91.05%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6290 62.90%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.9056 90.56%
Skin irritation - 0.7074 70.74%
Skin corrosion - 0.9465 94.65%
Ames mutagenesis - 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7394 73.94%
Micronuclear - 0.9000 90.00%
Hepatotoxicity - 0.6189 61.89%
skin sensitisation - 0.9159 91.59%
Respiratory toxicity - 0.5667 56.67%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5500 55.00%
Nephrotoxicity - 0.6817 68.17%
Acute Oral Toxicity (c) I 0.5879 58.79%
Estrogen receptor binding + 0.7684 76.84%
Androgen receptor binding + 0.7586 75.86%
Thyroid receptor binding - 0.5531 55.31%
Glucocorticoid receptor binding + 0.6333 63.33%
Aromatase binding + 0.6509 65.09%
PPAR gamma + 0.7419 74.19%
Honey bee toxicity - 0.6689 66.89%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9421 94.21%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.03% 91.11%
CHEMBL3714130 P46095 G-protein coupled receptor 6 95.99% 97.36%
CHEMBL226 P30542 Adenosine A1 receptor 95.63% 95.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.10% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.15% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.37% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.86% 89.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.04% 95.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.21% 100.00%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 86.44% 92.78%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.19% 95.89%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 83.66% 93.04%
CHEMBL1937 Q92769 Histone deacetylase 2 83.04% 94.75%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.81% 91.07%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.78% 92.94%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 81.62% 97.47%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.04% 94.00%
CHEMBL2243 O00519 Anandamide amidohydrolase 80.51% 97.53%
CHEMBL2581 P07339 Cathepsin D 80.21% 98.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dimorphotheca fruticosa
Glinus oppositifolius
Hypericum reflexum
Markhamia stipulata
Nicotiana alata
Senecio sandersonii
Sideritis soluta
Sideritis trojana
Sidneya tenuifolia
Verbascum densiflorum
Verbascum phlomoides
Vinca minor

Cross-Links

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PubChem 102445401
NPASS NPC245082
LOTUS LTS0209297
wikiData Q105009035