Cimifugin

Details

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Internal ID 9afb4c88-070f-488c-a277-1f7fa00775f1
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Chromones > Furanochromones
IUPAC Name (2S)-7-(hydroxymethyl)-2-(2-hydroxypropan-2-yl)-4-methoxy-2,3-dihydrofuro[3,2-g]chromen-5-one
SMILES (Canonical) CC(C)(C1CC2=C(O1)C=C3C(=C2OC)C(=O)C=C(O3)CO)O
SMILES (Isomeric) CC(C)([C@@H]1CC2=C(O1)C=C3C(=C2OC)C(=O)C=C(O3)CO)O
InChI InChI=1S/C16H18O6/c1-16(2,19)13-5-9-11(22-13)6-12-14(15(9)20-3)10(18)4-8(7-17)21-12/h4,6,13,17,19H,5,7H2,1-3H3/t13-/m0/s1
InChI Key ATDBDSBKYKMRGZ-ZDUSSCGKSA-N
Popularity 24 references in papers

Physical and Chemical Properties

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Molecular Formula C16H18O6
Molecular Weight 306.31 g/mol
Exact Mass 306.11033829 g/mol
Topological Polar Surface Area (TPSA) 85.20 Ų
XlogP 0.60
Atomic LogP (AlogP) 1.37
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

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37921-38-3
Cimitin
(2S)-7-(hydroxymethyl)-2-(2-hydroxypropan-2-yl)-4-methoxy-2,3-dihydrofuro[3,2-g]chromen-5-one
C09000
AKOS015896760
AC1L9C0B
CHEBI:3701
GTPL12555
DTXSID10331690
HY-N0634
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Cimifugin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9796 97.96%
Caco-2 + 0.6061 60.61%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.7809 78.09%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9263 92.63%
OATP1B3 inhibitior + 0.8900 89.00%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.7678 76.78%
P-glycoprotein inhibitior - 0.7111 71.11%
P-glycoprotein substrate - 0.7215 72.15%
CYP3A4 substrate + 0.5497 54.97%
CYP2C9 substrate - 0.6228 62.28%
CYP2D6 substrate - 0.8112 81.12%
CYP3A4 inhibition - 0.8113 81.13%
CYP2C9 inhibition - 0.6924 69.24%
CYP2C19 inhibition - 0.6125 61.25%
CYP2D6 inhibition - 0.8521 85.21%
CYP1A2 inhibition + 0.5353 53.53%
CYP2C8 inhibition - 0.7752 77.52%
CYP inhibitory promiscuity - 0.6646 66.46%
UGT catelyzed - 0.9000 90.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5998 59.98%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.8423 84.23%
Skin irritation - 0.8303 83.03%
Skin corrosion - 0.9597 95.97%
Ames mutagenesis + 0.6163 61.63%
Human Ether-a-go-go-Related Gene inhibition + 0.6469 64.69%
Micronuclear - 0.6000 60.00%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.8083 80.83%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.8000 80.00%
Mitochondrial toxicity + 0.6625 66.25%
Nephrotoxicity - 0.8720 87.20%
Acute Oral Toxicity (c) III 0.6155 61.55%
Estrogen receptor binding + 0.8110 81.10%
Androgen receptor binding + 0.5706 57.06%
Thyroid receptor binding + 0.6456 64.56%
Glucocorticoid receptor binding + 0.7470 74.70%
Aromatase binding + 0.6629 66.29%
PPAR gamma + 0.9334 93.34%
Honey bee toxicity - 0.8900 89.00%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.7619 76.19%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.69% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.24% 97.25%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.83% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.70% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.46% 86.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.00% 96.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.64% 94.00%
CHEMBL2581 P07339 Cathepsin D 89.58% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 87.81% 94.73%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 85.76% 89.34%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.75% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.85% 99.17%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 84.63% 96.77%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.34% 92.62%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.72% 86.92%
CHEMBL3192 Q9BY41 Histone deacetylase 8 81.82% 93.99%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.07% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.57% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Actaea cimicifuga
Actaea dahurica
Actaea racemosa
Actaea simplex
Angelica genuflexa
Angelica japonica
Eranthis cilicica
Ostericum grossiserratum
Saposhnikovia divaricata
Styphnolobium japonicum

Cross-Links

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PubChem 441960
NPASS NPC11232
LOTUS LTS0180847
wikiData Q27106170