(-)-Bakkenolide D

Details

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Internal ID a0becaea-4a75-48a7-8219-7babcab265e2
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones
IUPAC Name [(2R,3R,3aR,4S,7S,7aR)-3-acetyloxy-7,7a-dimethyl-4'-methylidene-2'-oxospiro[3,3a,4,5,6,7-hexahydro-1H-indene-2,3'-oxolane]-4-yl] (Z)-3-methylsulfanylprop-2-enoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C21H28O6S/c1-12-6-7-15(27-16(23)8-9-28-5)17-18(26-14(3)22)21(11-20(12,17)4)13(2)10-25-19(21)24/h8-9,12,15,17-18H,2,6-7,10-11H2,1,3-5H3/b9-8-/t12-,15-,17+,18+,20+,21+/m0/s1
InChI Key LWHLMCCRIWZBQO-PDSBHGERSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C21H28O6S
Molecular Weight 408.50 g/mol
Exact Mass 408.16065978 g/mol
Topological Polar Surface Area (TPSA) 104.00 Ų
XlogP 2.90
Atomic LogP (AlogP) 3.26
H-Bond Acceptor 7
H-Bond Donor 0
Rotatable Bonds 4

Synonyms

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18456-03-6
(-)-Bakkenolide D
orb1683096
DTXSID001316458
[(2R,3R,3Ar,4S,7S,7aR)-3-acetyloxy-7,7a-dimethyl-4'-methylidene-2'-oxospiro[3,3a,4,5,6,7-hexahydro-1H-indene-2,3'-oxolane]-4-yl] (Z)-3-methylsulfanylprop-2-enoate
HY-N7293
AKOS040761400
FS-7124
CS-0113198

2D Structure

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2D Structure of (-)-Bakkenolide D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9890 98.90%
Caco-2 - 0.5248 52.48%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7038 70.38%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8969 89.69%
OATP1B3 inhibitior + 0.9367 93.67%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.5250 52.50%
BSEP inhibitior - 0.5421 54.21%
P-glycoprotein inhibitior + 0.6315 63.15%
P-glycoprotein substrate - 0.7012 70.12%
CYP3A4 substrate + 0.6694 66.94%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8849 88.49%
CYP3A4 inhibition - 0.7778 77.78%
CYP2C9 inhibition - 0.8702 87.02%
CYP2C19 inhibition - 0.8261 82.61%
CYP2D6 inhibition - 0.9573 95.73%
CYP1A2 inhibition - 0.5728 57.28%
CYP2C8 inhibition + 0.4780 47.80%
CYP inhibitory promiscuity - 0.8964 89.64%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.6230 62.30%
Eye corrosion - 0.9788 97.88%
Eye irritation - 0.9410 94.10%
Skin irritation - 0.6187 61.87%
Skin corrosion - 0.9306 93.06%
Ames mutagenesis - 0.5000 50.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5612 56.12%
Micronuclear - 0.7400 74.00%
Hepatotoxicity + 0.6973 69.73%
skin sensitisation - 0.8260 82.60%
Respiratory toxicity - 0.6444 64.44%
Reproductive toxicity + 0.7111 71.11%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity + 0.8277 82.77%
Acute Oral Toxicity (c) III 0.4755 47.55%
Estrogen receptor binding + 0.8047 80.47%
Androgen receptor binding + 0.6118 61.18%
Thyroid receptor binding + 0.5705 57.05%
Glucocorticoid receptor binding + 0.7307 73.07%
Aromatase binding + 0.6310 63.10%
PPAR gamma + 0.7376 73.76%
Honey bee toxicity - 0.6237 62.37%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.9950 99.50%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.65% 94.45%
CHEMBL4040 P28482 MAP kinase ERK2 94.23% 83.82%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.16% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.76% 96.09%
CHEMBL340 P08684 Cytochrome P450 3A4 90.67% 91.19%
CHEMBL2039 P27338 Monoamine oxidase B 89.67% 92.51%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.69% 92.94%
CHEMBL2581 P07339 Cathepsin D 87.41% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.03% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.46% 85.14%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.62% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.49% 86.33%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 85.19% 96.77%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.49% 97.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.99% 89.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.01% 95.89%

Cross-Links

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PubChem 12299954
NPASS NPC81198
LOTUS LTS0271349
wikiData Q105158286