3-oxo-5,6-dehydrosuberyl-CoA

Details

Top
Internal ID 79a608e7-d17b-4a2b-b663-a01b59363ed2
Taxonomy Lipids and lipid-like molecules > Fatty Acyls > Fatty acyl thioesters > Acyl CoAs > 3-oxo-acyl CoAs
IUPAC Name 8-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-hydroxyphosphoryl]oxy-2-hydroxy-3,3-dimethylbutanoyl]amino]propanoylamino]ethylsulfanyl]-6,8-dioxooct-3-enoic acid
SMILES (Canonical) CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)N2C=NC3=C(N=CN=C32)N)O)OP(=O)(O)O)C(C(=O)NCCC(=O)NCCSC(=O)CC(=O)CC=CCC(=O)O)O
SMILES (Isomeric) CC(C)(COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)N2C=NC3=C(N=CN=C32)N)O)OP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCSC(=O)CC(=O)CC=CCC(=O)O)O
InChI InChI=1S/C29H44N7O20P3S/c1-29(2,24(43)27(44)32-8-7-18(38)31-9-10-60-20(41)11-16(37)5-3-4-6-19(39)40)13-53-59(50,51)56-58(48,49)52-12-17-23(55-57(45,46)47)22(42)28(54-17)36-15-35-21-25(30)33-14-34-26(21)36/h3-4,14-15,17,22-24,28,42-43H,5-13H2,1-2H3,(H,31,38)(H,32,44)(H,39,40)(H,48,49)(H,50,51)(H2,30,33,34)(H2,45,46,47)/t17-,22-,23-,24+,28-/m1/s1
InChI Key IFFFDKYRRUVOFP-NOQDIWQESA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C29H44N7O20P3S
Molecular Weight 935.70 g/mol
Exact Mass 935.15746899 g/mol
Topological Polar Surface Area (TPSA) 443.00 Ų
XlogP -5.70
Atomic LogP (AlogP) -0.96
H-Bond Acceptor 21
H-Bond Donor 10
Rotatable Bonds 25

Synonyms

Top
Q27132520

2D Structure

Top
2D Structure of 3-oxo-5,6-dehydrosuberyl-CoA

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8022 80.22%
Caco-2 - 0.8573 85.73%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.3508 35.08%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8545 85.45%
OATP1B3 inhibitior + 0.9347 93.47%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8349 83.49%
BSEP inhibitior + 0.8245 82.45%
P-glycoprotein inhibitior + 0.7454 74.54%
P-glycoprotein substrate + 0.7839 78.39%
CYP3A4 substrate + 0.7181 71.81%
CYP2C9 substrate - 0.5926 59.26%
CYP2D6 substrate - 0.8611 86.11%
CYP3A4 inhibition - 0.7662 76.62%
CYP2C9 inhibition - 0.7907 79.07%
CYP2C19 inhibition - 0.7616 76.16%
CYP2D6 inhibition - 0.8464 84.64%
CYP1A2 inhibition - 0.8006 80.06%
CYP2C8 inhibition + 0.7636 76.36%
CYP inhibitory promiscuity - 0.8899 88.99%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8900 89.00%
Carcinogenicity (trinary) Non-required 0.5150 51.50%
Eye corrosion - 0.9808 98.08%
Eye irritation - 0.9011 90.11%
Skin irritation - 0.7554 75.54%
Skin corrosion - 0.9168 91.68%
Ames mutagenesis - 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3710 37.10%
Micronuclear + 0.9600 96.00%
Hepatotoxicity + 0.5098 50.98%
skin sensitisation - 0.8324 83.24%
Respiratory toxicity + 0.8889 88.89%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity - 0.8627 86.27%
Acute Oral Toxicity (c) III 0.5373 53.73%
Estrogen receptor binding + 0.7764 77.64%
Androgen receptor binding + 0.7053 70.53%
Thyroid receptor binding + 0.6149 61.49%
Glucocorticoid receptor binding + 0.6758 67.58%
Aromatase binding + 0.6649 66.49%
PPAR gamma + 0.7434 74.34%
Honey bee toxicity - 0.6844 68.44%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9542 95.42%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.21% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 97.28% 99.17%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 96.63% 89.34%
CHEMBL2581 P07339 Cathepsin D 96.24% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 95.97% 99.23%
CHEMBL3401 O75469 Pregnane X receptor 95.30% 94.73%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.02% 91.11%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 93.54% 80.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 91.30% 96.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 90.43% 97.29%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.75% 89.00%
CHEMBL3891 P07384 Calpain 1 89.40% 93.04%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 86.65% 92.29%
CHEMBL1914 P06276 Butyrylcholinesterase 85.15% 95.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 85.15% 96.90%
CHEMBL1881 P43116 Prostanoid EP2 receptor 83.63% 93.00%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 82.33% 100.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.71% 94.33%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.65% 90.71%
CHEMBL5028 O14672 ADAM10 81.52% 97.50%
CHEMBL221 P23219 Cyclooxygenase-1 81.25% 90.17%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 81.11% 82.50%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 80.04% 91.03%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Calamus draco
Larix gmelinii var. gmelinii
Pinus merkusii
Pinus nigra
Pinus pinaster
Pinus taeda

Cross-Links

Top
PubChem 139031573
LOTUS LTS0043877
wikiData Q82979406