(25R)-3beta-(4-O-alpha-L-Rhamnopyranosyl-beta-D-glucopyranosyloxy)spirosta-5-ene

Details

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Internal ID 0baeb18f-0dd4-4bf0-9f98-819b0fc04d8d
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name 2-[4,5-dihydroxy-2-(hydroxymethyl)-6-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl)oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)C)O)O)O)O)O)C)C)C)OC1
SMILES (Isomeric) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)C)O)O)O)O)O)C)C)C)OC1
InChI InChI=1S/C39H62O12/c1-18-8-13-39(46-17-18)19(2)28-26(51-39)15-25-23-7-6-21-14-22(9-11-37(21,4)24(23)10-12-38(25,28)5)48-36-33(45)31(43)34(27(16-40)49-36)50-35-32(44)30(42)29(41)20(3)47-35/h6,18-20,22-36,40-45H,7-17H2,1-5H3
InChI Key ZUMDKMTZYHACBK-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C39H62O12
Molecular Weight 722.90 g/mol
Exact Mass 722.42412741 g/mol
Topological Polar Surface Area (TPSA) 177.00 Ų
XlogP 2.40
Atomic LogP (AlogP) 2.39
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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19057-68-2

2D Structure

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2D Structure of (25R)-3beta-(4-O-alpha-L-Rhamnopyranosyl-beta-D-glucopyranosyloxy)spirosta-5-ene

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6670 66.70%
Caco-2 - 0.8832 88.32%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.7312 73.12%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9065 90.65%
OATP1B3 inhibitior + 0.9077 90.77%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior + 0.6983 69.83%
P-glycoprotein inhibitior + 0.7048 70.48%
P-glycoprotein substrate - 0.5199 51.99%
CYP3A4 substrate + 0.7418 74.18%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8216 82.16%
CYP3A4 inhibition - 0.9365 93.65%
CYP2C9 inhibition - 0.9317 93.17%
CYP2C19 inhibition - 0.9163 91.63%
CYP2D6 inhibition - 0.9298 92.98%
CYP1A2 inhibition - 0.8611 86.11%
CYP2C8 inhibition + 0.7290 72.90%
CYP inhibitory promiscuity - 0.8619 86.19%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.4702 47.02%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.9244 92.44%
Skin irritation - 0.5365 53.65%
Skin corrosion - 0.9419 94.19%
Ames mutagenesis - 0.9870 98.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7259 72.59%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 1.0000 100.00%
skin sensitisation - 0.9151 91.51%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.8261 82.61%
Acute Oral Toxicity (c) III 0.4854 48.54%
Estrogen receptor binding + 0.8118 81.18%
Androgen receptor binding + 0.7038 70.38%
Thyroid receptor binding - 0.6188 61.88%
Glucocorticoid receptor binding + 0.5433 54.33%
Aromatase binding + 0.6646 66.46%
PPAR gamma + 0.6813 68.13%
Honey bee toxicity - 0.5530 55.30%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9347 93.47%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.60% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.27% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 96.82% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.48% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.56% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.47% 89.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.87% 97.25%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.98% 95.89%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.50% 95.89%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 88.69% 89.05%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.04% 94.45%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 86.29% 95.50%
CHEMBL1914 P06276 Butyrylcholinesterase 86.15% 95.00%
CHEMBL218 P21554 Cannabinoid CB1 receptor 85.67% 96.61%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.51% 86.33%
CHEMBL5255 O00206 Toll-like receptor 4 84.23% 92.50%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.47% 100.00%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 81.80% 91.71%
CHEMBL237 P41145 Kappa opioid receptor 81.49% 98.10%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.99% 92.62%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.89% 94.00%
CHEMBL2581 P07339 Cathepsin D 80.62% 98.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Borassus flabellifer
Dioscorea composita
Dioscorea floribunda
Dioscorea panthaica
Dracaena draco
Ruscus hypophyllum
Smilax china
Smilax menispermoidea

Cross-Links

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PubChem 163035150
LOTUS LTS0022091
wikiData Q105383805