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Solanum habrochaites

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Table of Contents

Details
Description
Synonyms
Common Names
Subtypes (subspecies, varieties, subvarieties, forms)
Germination/Propagation
Distribution
Links to other databases
Genome
Scientific Literature
Phytochemical Profile
Biological Material
Contributors
Collections

Details Top

Internal ID UUID644041ae4233f433252129
Scientific name Solanum habrochaites
Authority S.Knapp & D.M.Spooner
First published in Novon 9(3): 375. 1999.

Description Top

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Synonyms Top

Scientific name Authority First published in
Lycopersicon agrimonifolium Hort. Berol. ex Sendtn. Fl. Bras. (Martius) 10: 125. 1846
Lycopersicon agrimoniifolium Herb. Berol. ex Dunal Prodr. [A. P. de Candolle] 13(1): 27. 1852
Lycopersicon agrimoniifolium Dunal Prodr. [A. P. de Candolle] 13(1): 24. 1852
Lycopersicon hirsutum Dunal Solan. Syn. 4. 1816
Lycopersicon hirsutum var. agrimoniifolium (Dunal) Luckwill Aberdeen Univ. Studies 120: 36. 1943.
Lycopersicon hirsutum var. glabratum (C.H.Mull.) Luckwill Aberdeen Univ. Studies 120: 36. 1943.
Solanum agrimonifolium (Dunal) J.F.Macbr. Publ. Field Mus. Nat. Hist., Bot. 13(5-B,1): 159. 1962.
Solanum agrimoniifolium Pav. ex Dunal Prodr. [A. P. de Candolle] 13(1): 25. 1852.
Lycopersicon hirsutum f. glabratum C.H.Mull. U. S. Dept. Agric. Misc. Publ. 382 [383??]: 22. 1940.
Lycopersicon hirsutum f. glabratum (C.H.Mull.) C.M.Rick, Fobes & S.D.Tanksley Pl. Syst. Evol. 132: 280. 1979

Common names Top

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Subspecies (abbr. subsp./ssp.) Top

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Varieties (abbr. var.) Top

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Subvarieties (abbr. subvar.) Top

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Forms (abbr. f.) Top

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Germination/Propagation Top

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Distribution (via POWO/KEW) Top

Legend for the distribution data:
- Doubtful data
- Extinct
- Introduced
- Native

Links to other databases Top

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Database ID/link to page
World Flora Online wfo-0001028281
Tropicos 50152961
KEW urn:lsid:ipni.org:names:1009879-1
The Plant List tro-50152961
Open Tree Of Life 885264
NCBI Taxonomy 62890
IUCN Red List 71781788
IPNI 1009879-1
GBIF 2929599
EPPO LYPHI
USDA GRIN 415222
Wikipedia Solanum_habrochaites

Genomes (via NCBI) Top

Below is displayed the reference genome only!
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Accession Assembly
Name Level Submitter Released Coverage Size
GCA_027704765.1 ASM2770476v1 Scaffold Cornell University 2023-01-11 32.4x 915.24 Mb

Scientific Literature Top

Below are displayed the latest 15 articles published in PMC (PubMed Central®) and other sources (DOI number only)!
If you wish to see all the related articles click here.
Title Authors Publication Released IDs
Trading acyls and swapping sugars: metabolic innovations in Solanum trichomes Fiesel PD, Kerwin RE, Daniel Jones A, Last RL bioRxiv 19-Mar-2024
PMCID:PMC10274652
doi:10.1101/2023.06.05.542877
PMID:37333341
Systemically functional characterization of regiospecific flavonoid O-methyltransferases from Glycine max Feng B, Jiang Y, Li X, Wang Y, Ren Z, Lu J, Yan X, Zhou Z, Wang P Synth Syst Biotechnol 15-Mar-2024
PMCID:PMC10972763
doi:10.1016/j.synbio.2024.03.009
PMID:38549618
Integrated transcriptome and DNA methylome analysis reveal the biological base of increased resistance to gray leaf spot and growth inhibition in interspecific grafted tomato scions Liu C, Jia Y, He L, Li H, Song J, Ji L, Wang C BMC Plant Biol 21-Feb-2024
PMCID:PMC10880203
doi:10.1186/s12870-024-04764-8
PMID:38383283
Unveiling Molecular Effects of the Secondary Metabolite 2-Dodecanone in the Model Hymenopteran Nasonia vitripennis Planelló R, Aquilino M, Beaugeard L, Llorente L, Herrero Ó, Siaussat D, Lécureuil C Toxics 18-Feb-2024
PMCID:PMC10892068
doi:10.3390/toxics12020159
PMID:38393254
Mapping phenotypic performance and novel SNPs for cold tolerance in tomato (Solanum lycopersicum) genotypes through GWAS and population genetics Shah LR, Ahmed N, Hussain K, Mansoor S, Khan T, Khan I, Narayan S, Afroza B, Murtaza I, Shikari AB, Bhat B, Masoodi KZ BMC Genom Data 27-Jan-2024
PMCID:PMC10822167
doi:10.1186/s12863-024-01190-5
PMID:38281048
Integration of metabolomics and transcriptomics reveals the regulation mechanism of the phenylpropanoid biosynthesis pathway in insect resistance traits in Solanum habrochaites Wang M, Wang Y, Li X, Zhang Y, Chen X, Liu J, Qiua Y, Wang A Hortic Res 09-Jan-2024
PMCID:PMC10857935
doi:10.1093/hr/uhad277
PMID:38344649
Intra- and inter-specific reproductive barriers in the tomato clade Moreels P, Bigot S, Defalque C, Correa F, Martinez JP, Lutts S, Quinet M Front Plant Sci 08-Dec-2023
PMCID:PMC10739309
doi:10.3389/fpls.2023.1326689
PMID:38143584
Carboxypeptidase inhibitors from Solanaceae as a new subclass of pathogenesis related peptide aiming biotechnological targets for plant defense Gomes GD, Espósito PC, Baracat-Pereira MC Front Mol Biosci 16-Nov-2023
PMCID:PMC10687636
doi:10.3389/fmolb.2023.1259026
PMID:38033385
Cloning, Expression and Functional Characterization of a Novel α-Humulene Synthase, Responsible for the Formation of Sesquiterpene in Agarwood Originating from Aquilaria malaccensis Sundaraj Y, Abdullah H, Nezhad NG, Rodrigues KF, Sabri S, Baharum SN Curr Issues Mol Biol 10-Nov-2023
PMCID:PMC10670791
doi:10.3390/cimb45110564
PMID:37998741
Advances and Prospects of Virus-Resistant Breeding in Tomatoes Shahriari Z, Su X, Zheng K, Zhang Z Int J Mol Sci 22-Oct-2023
PMCID:PMC10607384
doi:10.3390/ijms242015448
PMID:37895127
Signaling and Resistosome Formation in Plant Innate Immunity to Viruses: Is There a Common Mechanism of Antiviral Resistance Conserved across Kingdoms? Ivanov PA, Gasanova TV, Repina MN, Zamyatnin AA Jr Int J Mol Sci 03-Sep-2023
PMCID:PMC10487714
doi:10.3390/ijms241713625
PMID:37686431
A systematic analysis of the phloem protein 2 (PP2) proteins in Gossypium hirsutum reveals that GhPP2-33 regulates salt tolerance Wei F, Chen P, Jian H, Guo X, Lv X, Lian B, Sun M, An L, Dang X, Yang M, Wu H, Zhang N, Wu A, Wang H, Ma L, Fu X, Lu J, Yu S, Wei H BMC Genomics 18-Aug-2023
PMCID:PMC10439568
doi:10.1186/s12864-023-09546-4
PMID:37596513
Top and Side Lighting Induce Morphophysiological Improvements in Korean Ginseng Sprouts (Panax ginseng C.A. Meyer) Grown from One-Year-Old Roots Yang J, Song J, Shilpha J, Jeong BR Plants (Basel) 02-Aug-2023
PMCID:PMC10421474
doi:10.3390/plants12152849
PMID:37571002
Leaf resistance to Botrytis cinerea in wild tomato Solanum habrochaites depends on inoculum composition You Y, Astudillo-Estévez I, Essenstam B, Qin S, van Kan JA Front Plant Sci 02-Aug-2023
PMCID:PMC10433766
doi:10.3389/fpls.2023.1156804
PMID:37600190
Abiotic Stress-Induced Leaf Senescence: Regulatory Mechanisms and Application Tan S, Sha Y, Sun L, Li Z Int J Mol Sci 26-Jul-2023
PMCID:PMC10418887
doi:10.3390/ijms241511996
PMID:37569371

Phytochemical Profile Top

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Below are displayed the proven (via scientific papers) natural compounds!
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Name PubChem ID Canonical SMILES MW Found in Proof
> Benzenoids / Benzene and substituted derivatives / Styrenes
Butyric Acid Cinnamyl Ester 7664 Click to see CCCC(=O)OCC=CC1=CC=CC=C1 204.26 unknown https://doi.org/10.1080/10412905.1995.9698562
Cinnamyl butyrate 5355254 Click to see CCCC(=O)OCC=CC1=CC=CC=C1 204.26 unknown https://doi.org/10.1080/10412905.1995.9698562
Cinnamyl isobutyrate 5355851 Click to see CC(C)C(=O)OCC=CC1=CC=CC=C1 204.26 unknown https://doi.org/10.1080/10412905.1995.9698562
> Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Acyclic monoterpenoids
Nerol 643820 Click to see CC(=CCCC(=CCO)C)C 154.25 unknown https://doi.org/10.1080/10412905.1995.9698562
> Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Bicyclic monoterpenoids
(2E)-2-methyl-5-[(1S,5S,6S)-6-methyl-2-methylidenebicyclo[3.1.1]heptan-6-yl]pent-2-enoic acid 11958248 Click to see CC(=CCCC1(C2CCC(=C)C1C2)C)C(=O)O 234.33 unknown https://doi.org/10.1007/BF01019351
(E)-5-[(1S,5S,6S)-2,6-dimethyl-6-bicyclo[3.1.1]hept-2-enyl]-2-methylpent-2-enoic acid 11031804 Click to see CC1=CCC2CC1C2(C)CCC=C(C)C(=O)O 234.33 unknown https://doi.org/10.1007/BF01019351
2-Methyl-5-(6-methyl-2-methylidene-6-bicyclo[3.1.1]heptanyl)pent-2-enoic acid 73153525 Click to see CC(=CCCC1(C2CCC(=C)C1C2)C)C(=O)O 234.33 unknown https://doi.org/10.1007/BF01019351
5-(2,6-Dimethyl-6-bicyclo[3.1.1]hept-2-enyl)-2-methylpent-2-enoic acid 73832369 Click to see CC1=CCC2CC1C2(C)CCC=C(C)C(=O)O 234.33 unknown https://doi.org/10.1007/BF01019351
Bergamotene 521569 Click to see CC(=CCCC1(C2CCC(=C)C1C2)C)C 204.35 unknown https://doi.org/10.1080/10412905.1995.9698562
beta-Pinene 14896 Click to see CC1(C2CCC(=C)C1C2)C 136.23 unknown https://doi.org/10.1080/10412905.1995.9698562
Camphene 6616 Click to see CC1(C2CCC(C2)C1=C)C 136.23 unknown https://doi.org/10.1080/10412905.1995.9698562
> Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Menthane monoterpenoids
Piperitone 6987 Click to see CC1=CC(=O)C(CC1)C(C)C 152.23 unknown https://doi.org/10.1080/10412905.1995.9698562
> Lipids and lipid-like molecules / Prenol lipids / Sesquiterpenoids
(-)-Zingiberene 521253 Click to see CC1=CCC(C=C1)C(C)CCC=C(C)C 204.35 unknown https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3193516/
(1Z,6E)-gamma-humulene 14038477 Click to see CC1=CCCC(=C)C=CC(CCC1)(C)C 204.35 unknown https://doi.org/10.1080/10412905.1995.9698562
3,7,11-Trimethyldodeca-2,6,10-trienoic acid 93051 Click to see CC(=CCCC(=CCCC(=CC(=O)O)C)C)C 236.35 unknown https://doi.org/10.1007/BF00980597
7-Epizingiberene 21729595 Click to see CC1=CCC(C=C1)C(C)CCC=C(C)C 204.35 unknown https://doi.org/10.1016/S0040-4020(01)89415-1
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3193516/
alpha-Curcumene 92139 Click to see CC1=CC=C(C=C1)C(C)CCC=C(C)C 202.33 unknown https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1075798/
https://doi.org/10.1016/S0040-4020(01)89415-1
beta-Farnesene 5281517 Click to see CC(=CCCC(=CCCC(=C)C=C)C)C 204.35 unknown https://doi.org/10.1080/10412905.1995.9698562
Caryophyllene 5281515 Click to see CC1=CCCC(=C)C2CC(C2CC1)(C)C 204.35 unknown https://doi.org/10.1080/10412905.1995.9698562
CID 16396350 16396350 Click to see CC1(CCCC2(C3C1C(C2=C)CC3)C)C 204.35 unknown https://doi.org/10.1080/10412905.1995.9698562
Cyclohexene, 4-ethenyl-4-methyl-3-(1-methylethenyl)-1-(1-methylethyl)-, (3R-trans)- 89316 Click to see CC(C)C1=CC(C(CC1)(C)C=C)C(=C)C 204.35 unknown https://doi.org/10.1080/10412905.1995.9698562
delta-Elemene 12309449 Click to see CC(C)C1=CC(C(CC1)(C)C=C)C(=C)C 204.35 unknown https://doi.org/10.1080/10412905.1995.9698562
Farnesoic acid 5275507 Click to see CC(=CCCC(=CCCC(=CC(=O)O)C)C)C 236.35 unknown https://doi.org/10.1007/BF00980597
gamma-Bisabolene, (Z)- 3033866 Click to see CC1=CCC(=C(C)CCC=C(C)C)CC1 204.35 unknown https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1075798/
Longifolene 289151 Click to see CC1(CCCC2(C3C1C(C2=C)CC3)C)C 204.35 unknown https://doi.org/10.1080/10412905.1995.9698562
Zingiberene 92776 Click to see CC1=CCC(C=C1)C(C)CCC=C(C)C 204.35 unknown https://doi.org/10.1021/JF00085A047
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1075798/
> Lipids and lipid-like molecules / Prenol lipids / Sesquiterpenoids / Elemane sesquiterpenoids
Beta-Elemene 6918391 Click to see CC(=C)C1CCC(C(C1)C(=C)C)(C)C=C 204.35 unknown https://doi.org/10.1080/10412905.1995.9698562
> Lipids and lipid-like molecules / Prenol lipids / Sesquiterpenoids / Eudesmane, isoeudesmane or cycloeudesmane sesquiterpenoids
beta-Selinene 442393 Click to see CC(=C)C1CCC2(CCCC(=C)C2C1)C 204.35 unknown https://doi.org/10.1080/10412905.1995.9698562
> Organic oxygen compounds / Organooxygen compounds / Carbonyl compounds / Ketones
2-Tridecanone 11622 Click to see CCCCCCCCCCCC(=O)C 198.34 unknown https://doi.org/10.1021/JF00085A047
https://doi.org/10.1023/B:JOEC.0000006466.63606.0D
https://doi.org/10.1007/BF01020164
2-Undecanone 8163 Click to see CCCCCCCCCC(=O)C 170.29 unknown https://doi.org/10.1007/BF01020164
https://doi.org/10.1023/B:JOEC.0000006466.63606.0D

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