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Xylopia emarginata

Xylopia emarginata - Unknown
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Author: Public Domain - WikiMedia
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Table of Contents

Details
Description
Synonyms
Common Names
Subtypes (subspecies, varieties, subvarieties, forms)
Germination/Propagation
Distribution
Links to other databases
Genome
Scientific Literature
Phytochemical Profile
Biological Material
Contributors
Collections

Details Top

Internal ID UUID643ffbb6c1cb9958963404
Scientific name Xylopia emarginata
Authority Mart.
First published in Fl. Bras. 13(1): 42 (1841)

Description Top

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The species is a small tree or shrub, typically growing to a height of 1-3 meters. Its leaves are alternate, oblong-lanceolate, and measure up to 8 cm long. Its flowers are yellowish-green and its fruits are drupes, which are dark brown and measure up to 1 cm in diameter. Xylopia emarginata is used in traditional medicine for its anti-inflammatory, analgesic, and antiseptic properties. It is also used as a flavoring agent in food and beverages.

Xylopia emarginata is a species of plant in the Annonaceae family native to Cerrado vegetation in Colombia, Venezuela, Bolivia, and Northern Brazil. It is a small tree or shrub, typically growing to a height of 1-3 meters, with alternate, oblong-lanceolate leaves measuring up to 8 cm long. Its flowers are yellowish-green and its fruits are dark brown drupes measuring up to 1 cm in diameter. The species is used in traditional medicine for its anti-inflammatory, analgesic, and antiseptic properties, as well as a flavoring agent in food and beverages.

Synonyms Top

Scientific name Authority First published in
Xylopicrum emarginatum Kuntze Revis. Gen. Pl. 1: 8 (1891)
Xylopia emarginata var. duckei R.E.Fr. Acta Horti Berg. 12: 209 (1934)

Common names Top

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Subspecies (abbr. subsp./ssp.) Top

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Varieties (abbr. var.) Top

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Subvarieties (abbr. subvar.) Top

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Forms (abbr. f.) Top

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Germination/Propagation Top

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No germination or propagation data was added yet.

Distribution (via POWO/KEW) Top

Legend for the distribution data:
- Doubtful data
- Extinct
- Introduced
- Native
  • Southern America
    • Brazil
      • Brazil North
      • Brazil Northeast
      • Brazil Southeast
      • Brazil West-central
    • Northern South America
      • Venezuela
    • Western South America
      • Bolivia
      • Colombia

Links to other databases Top

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Database ID/link to page
World Flora Online wfo-0000428848
Tropicos 1600500
KEW urn:lsid:ipni.org:names:76126-1
The Plant List kew-2468076
Open Tree Of Life 3867957
NCBI Taxonomy 1005658
IUCN Red List 143322627
IPNI 76126-1
GBIF 3157276
Freebase /m/04zx6rb
EOL 1054221
Wikipedia Xylopia_emarginata
CMAUP NPO8738

Genomes (via NCBI) Top

No reference genome is available on NCBI yet. We are constantly monitoring for new data.

Scientific Literature Top

Below are displayed the latest 15 articles published in PMC (PubMed Central®) and other sources (DOI number only)!
If you wish to see all the related articles click here.
Title Authors Publication Released IDs
Natural Products as Mite Control Agents in Animals: A Review Liao F, Han C, Deng Q, Zhou Z, Bao T, Zhong M, Tao G, Li R, Han B, Qiao Y, Hu Y Molecules 27-Sep-2023
PMCID:PMC10574536
doi:10.3390/molecules28196818
PMID:37836661
Exploring the chemical composition, in vitro and in silico study of the anticandidal properties of annonaceae species essential oils from the Amazon Cascaes MM, Marques da Silva SH, de Oliveira MS, Cruz JN, de Moraes ÂA, do Nascimento LD, Ferreira OO, Guilhon GM, Andrade EH PLoS One 24-Aug-2023
PMCID:PMC10449155
doi:10.1371/journal.pone.0289991
PMID:37616214
Tree Species and Morphology of Holes Caused by Black-Tufted Marmosets to Obtain Exudates: Some Implications for the Exudativory Lamoglia JM, Boere V, Picoli EA, de Oliveira JA, Silva Neto CD, Silva ID Animals (Basel) 27-Sep-2022
PMCID:PMC9559504
doi:10.3390/ani12192578
PMID:36230319
Phytochemical Profile, Antioxidant Potential and Toxicity Evaluation of the Essential Oils from Duguetia and Xylopia Species (Annonaceae) from the Brazilian Amazon Cascaes MM, De Moraes ÂA, Cruz JN, Franco CD, E Silva RC, do Nascimento LD, Ferreira OO, dos Anjos TO, de Oliveira MS, Guilhon GM, Andrade EH Antioxidants (Basel) 30-Aug-2022
PMCID:PMC9495368
doi:10.3390/antiox11091709
PMID:36139777
Toxic Potential of Cerrado Plants on Different Organisms Rocha JD, Carneiro FM, Fernandes AS, Morais JM, Borges LL, Chen-Chen L, de Almeida LM, Bailão EF Int J Mol Sci 22-Mar-2022
PMCID:PMC8998518
doi:10.3390/ijms23073413
PMID:35408775
Antiprotozoal and Antitumor Activity of Natural Polycyclic Endoperoxides: Origin, Structures and Biological Activity Dembitsky VM, Ermolenko E, Savidov N, Gloriozova TA, Poroikov VV Molecules 28-Jan-2021
PMCID:PMC7865715
doi:10.3390/molecules26030686
PMID:33525706
In vitro and in vivo anti-malarial activity of plants from the Brazilian Amazon Lima RB, Rocha e Silva LF, Melo MR, Costa JS, Picanço NS, Lima ES, Vasconcellos MC, Boleti AP, Santos JM, Amorim RC, Chaves FC, Coutinho JP, Tadei WP, Krettli AU, Pohlit AM Malar J 18-Dec-2015
PMCID:PMC4683771
doi:10.1186/s12936-015-0999-2
PMID:26682750
Malaria in South America: a drug discovery perspective Cruz LR, Spangenberg T, Lacerda MV, Wells TN Malar J 24-May-2013
PMCID:PMC3665683
doi:10.1186/1475-2875-12-168
PMID:23706107
Alkaloid, flavonoids and terpenoids from leaves and fruits of Xylopia emarginata (Annonaceae) Isabel C Moreira, João Henrique G Lago, Nídia F Roque Elsevier BV 25-Mar-2003
doi:10.1016/S0305-1978(02)00180-1
Diterpenic adducts from Xylopia species Wagner Vilegas, Joana D'Arc Felicio, Nidia F. Roque, Hugo E. Gottlieb Elsevier BV 25-Jul-2002
doi:10.1016/0031-9422(91)85030-4
Foliar flavonoids of Annonaceae from Brazil: taxonomic significance. Santos DY, Salatino ML Phytochemistry 01-Nov-2000
doi:10.1016/S0031-9422(00)00227-2
PMID:11130666

Phytochemical Profile Top

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Below are displayed the proven (via scientific papers) natural compounds!
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Name PubChem ID Canonical SMILES MW Found in Proof
> Alkaloids and derivatives / Aporphines
Anonaine 160597 Click to see C1CNC2CC3=CC=CC=C3C4=C2C1=CC5=C4OCO5 265.31 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
> Lipids and lipid-like molecules / Prenol lipids / Diterpenoids / Kaurane diterpenoids
(1S,4S,5R,9S,10R,13R)-5,9-dimethyl-14-methylidenetetracyclo[11.2.1.01,10.04,9]hexadecan-5-ol 102239787 Click to see CC12CCCC(C1CCC34C2CCC(C3)C(=C)C4)(C)O 274.40 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
Kaurenoic Acid 73062 Click to see CC12CCCC(C1CCC34C2CCC(C3)C(=C)C4)(C)C(=O)O 302.50 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
> Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Acyclic monoterpenoids
Citral 638011 Click to see CC(=CCCC(=CC=O)C)C 152.23 unknown via CMAUP database
Neral 643779 Click to see CC(=CCCC(=CC=O)C)C 152.23 unknown via CMAUP database
> Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Aromatic monoterpenoids
methyl (1R,2S,6R)-3-methyl-2-(3-methylbut-2-enyl)-6-phenylcyclohex-3-ene-1-carboxylate 24864449 Click to see CC1=CCC(C(C1CC=C(C)C)C(=O)OC)C2=CC=CC=C2 298.40 unknown via CMAUP database
> Lipids and lipid-like molecules / Prenol lipids / Monoterpenoids / Bicyclic monoterpenoids
[(2S)-7-Hydroxy-5-methoxy-2-methyl-2-(4-methyl-3-pentenyl)-2H-1-benzopyran-8-yl][(1R,2S,6R)-3-methyl-2-(3-methyl-2-butenyl)-6-phenyl-3-cyclohexenyl]methanone 101855694 Click to see CC1=CCC(C(C1CC=C(C)C)C(=O)C2=C3C(=C(C=C2O)OC)C=CC(O3)(C)CCC=C(C)C)C4=CC=CC=C4 540.70 unknown via CMAUP database
Panduratin D 24864268 Click to see CC1=CCC(C(C1CC=C(C)C)C(=O)C2=C3C(=C(C=C2O)OC)C=CO3)C4=CC=CC=C4 430.50 unknown via CMAUP database
> Lipids and lipid-like molecules / Prenol lipids / Sesquiterpenoids
beta-CARYOPHYLLENE OXIDE 1742210 Click to see CC1(CC2C1CCC3(C(O3)CCC2=C)C)C 220.35 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
Caryophyllene epoxide 14350 Click to see CC1(CC2C1CCC3(C(O3)CCC2=C)C)C 220.35 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
> Lipids and lipid-like molecules / Prenol lipids / Sesquiterpenoids / Aromadendrane sesquiterpenoids / 5,10-cycloaromadendrane sesquiterpenoids
(1aS,4aS,7S,7aR,7bS)-1,1,7-trimethyl-4-methylidene-1a,2,3,4a,5,6,7a,7b-octahydrocyclopropa[h]azulen-7-ol 97032059 Click to see CC1(C2C1C3C(CCC3(C)O)C(=C)CC2)C 220.35 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
(7aR)-1,1,7-trimethyl-4-methylidene-1a,2,3,4a,5,6,7a,7b-octahydrocyclopropa[h]azulen-7-ol 5321422 Click to see CC1(C2C1C3C(CCC3(C)O)C(=C)CC2)C 220.35 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
> Lipids and lipid-like molecules / Prenol lipids / Sesquiterpenoids / Guaianes
(1R,3aS,8aS)-1-methyl-4-methylidene-7-propan-2-yl-2,3,3a,5,6,8a-hexahydroazulen-1-ol 137357 Click to see CC(C)C1=CC2C(CCC2(C)O)C(=C)CC1 220.35 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
(1S,3aS)-1-methyl-4-methylidene-7-propan-2-yl-2,3,3a,5,6,8a-hexahydroazulen-1-ol 129316993 Click to see CC(C)C1=CC2C(CCC2(C)O)C(=C)CC1 220.35 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
> Lipids and lipid-like molecules / Prenol lipids / Triterpenoids
(1'R,2'S,4'S,5S,5'R,9'S,10'S,13'R)-1-[2-[(1R,4aR,8aR)-5,5,8a-trimethyl-2-methylidene-3,4,4a,6,7,8-hexahydro-1H-naphthalen-1-yl]ethyl]-2'-acetyloxy-5',9'-dimethyl-15'-oxospiro[cyclohexene-5,14'-tetracyclo[11.2.1.01,10.04,9]hexadecane]-5'-carboxylic acid 162988034 Click to see CC(=O)OC1CC2C(CCCC2(C)C(=O)O)(C3C14CC(CC3)C5(C4=O)CCC=C(C5)CCC6C(=C)CCC7C6(CCCC7(C)C)C)C 646.90 unknown https://doi.org/10.1016/0031-9422(91)85030-4
(1'R,2'S,4S,4'S,5'R,9'S,10'S,13'R)-1-[2-[(1R,4aR,8aR)-5,5,8a-trimethyl-2-methylidene-3,4,4a,6,7,8-hexahydro-1H-naphthalen-1-yl]ethyl]-2'-acetyloxy-5',9'-dimethyl-15'-oxospiro[cyclohexene-4,14'-tetracyclo[11.2.1.01,10.04,9]hexadecane]-5'-carboxylic acid 162982885 Click to see CC(=O)OC1CC2C(CCCC2(C)C(=O)O)(C3C14CC(CC3)C5(C4=O)CCC(=CC5)CCC6C(=C)CCC7C6(CCCC7(C)C)C)C 646.90 unknown https://doi.org/10.1016/0031-9422(91)85030-4
2'-acetyloxy-1-[2-(5,5,8a-trimethyl-2-methylidene-3,4,4a,6,7,8-hexahydro-1H-naphthalen-1-yl)ethyl]-5',9'-dimethyl-15'-oxospiro[cyclohexene-4,14'-tetracyclo[11.2.1.01,10.04,9]hexadecane]-5'-carboxylic acid 162982884 Click to see CC(=O)OC1CC2C(CCCC2(C)C(=O)O)(C3C14CC(CC3)C5(C4=O)CCC(=CC5)CCC6C(=C)CCC7C6(CCCC7(C)C)C)C 646.90 unknown https://doi.org/10.1016/0031-9422(91)85030-4
2'-acetyloxy-1-[2-(5,5,8a-trimethyl-2-methylidene-3,4,4a,6,7,8-hexahydro-1H-naphthalen-1-yl)ethyl]-5',9'-dimethyl-15'-oxospiro[cyclohexene-5,14'-tetracyclo[11.2.1.01,10.04,9]hexadecane]-5'-carboxylic acid 162988033 Click to see CC(=O)OC1CC2C(CCCC2(C)C(=O)O)(C3C14CC(CC3)C5(C4=O)CCC=C(C5)CCC6C(=C)CCC7C6(CCCC7(C)C)C)C 646.90 unknown https://doi.org/10.1016/0031-9422(91)85030-4
> Lipids and lipid-like molecules / Steroids and steroid derivatives / Stigmastanes and derivatives
17-(5-ethyl-6-methylheptan-2-yl)-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-ol 86821 Click to see CCC(CCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C)C(C)C 414.70 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
24-Ethylcholest-5-en-3beta-ol 22012 Click to see CCC(CCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C)C(C)C 414.70 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
> Organic acids and derivatives / Carboxylic acids and derivatives / Tricarboxylic acids and derivatives
[(1S,2S,3R,7R,8S,9R,11R,13S)-1,9-dihydroxy-9,13-dimethyl-4-methylidene-8-(2-methylpropanoyloxy)-5-oxo-6,14-dioxatricyclo[9.2.1.03,7]tetradecan-2-yl] 2-methylbut-2-enoate 123441477 Click to see CC=C(C)C(=O)OC1C2C(C(C(CC3CC(C1(O3)O)C)(C)O)OC(=O)C(C)C)OC(=O)C2=C 466.50 unknown via CMAUP database
[(1S,2S,3R,7R,8S,9R,11R,13S)-1,9-dihydroxy-9,13-dimethyl-8-(3-methylbutanoyloxy)-4-methylidene-5-oxo-6,14-dioxatricyclo[9.2.1.03,7]tetradecan-2-yl] 2-methylbut-2-enoate 123772000 Click to see CC=C(C)C(=O)OC1C2C(C(C(CC3CC(C1(O3)O)C)(C)O)OC(=O)CC(C)C)OC(=O)C2=C 480.50 unknown via CMAUP database
[(1S,2S,3R,7R,8S,9R,11R,13S)-8-but-2-enoyloxy-1,9-dihydroxy-9,13-dimethyl-4-methylidene-5-oxo-6,14-dioxatricyclo[9.2.1.03,7]tetradecan-2-yl] 2-methylbut-2-enoate 123438394 Click to see CC=CC(=O)OC1C2C(C(C3(C(CC(O3)CC1(C)O)C)O)OC(=O)C(=CC)C)C(=C)C(=O)O2 464.50 unknown via CMAUP database
> Organoheterocyclic compounds / Benzopyrans / 1-benzopyrans / 2,2-dimethyl-1-benzopyrans
Panduratin E 24864269 Click to see CC1=CCC(C(C1CC=C(C)C)C(=O)C2=C3C(=C(C=C2O)OC)C=CC(O3)(C)C)C4=CC=CC=C4 472.60 unknown via CMAUP database
> Phenylpropanoids and polyketides / Diarylheptanoids / Linear diarylheptanoids
(2,6-dihydroxy-4-methoxyphenyl)-[(1S,2R,6S)-3-methyl-2-(3-methylbut-2-enyl)-6-phenylcyclohex-3-en-1-yl]methanone 25023021 Click to see CC1=CCC(C(C1CC=C(C)C)C(=O)C2=C(C=C(C=C2O)OC)O)C3=CC=CC=C3 406.50 unknown via CMAUP database
4-hydroxypanduratin A 636530 Click to see CC1=CCC(C(C1CC=C(C)C)C(=O)C2=C(C=C(C=C2O)O)O)C3=CC=CC=C3 392.50 unknown via CMAUP database
Isopanduratin A 10069916 Click to see CC1=CCC(C(C1CC=C(C)C)C(=O)C2=C(C=C(C=C2OC)O)O)C3=CC=CC=C3 406.50 unknown via CMAUP database
Isopanduratin A1 44444913 Click to see CC1=CCC(C(C1CC=C(C)C)C2=CC=CC=C2)C(=O)C3=C(C=C(C=C3OC)O)O 406.50 unknown via CMAUP database
Panduratin A 6483648 Click to see CC1=CCC(C(C1CC=C(C)C)C(=O)C2=C(C=C(C=C2O)OC)O)C3=CC=CC=C3 406.50 unknown via CMAUP database
> Phenylpropanoids and polyketides / Flavonoids / Flavans / Flavanones
Pinocembrin 68071 Click to see C1C(OC2=CC(=CC(=C2C1=O)O)O)C3=CC=CC=C3 256.25 unknown via CMAUP database
> Phenylpropanoids and polyketides / Flavonoids / Flavonoid glycosides / Flavonoid O-glycosides / Flavonoid-3-O-glycosides
5,7-Dihydroxy-2-(4-hydroxyphenyl)-3-(3,4,5-trihydroxyoxan-2-yl)oxychromen-4-one 14749097 Click to see C1C(C(C(C(O1)OC2=C(OC3=CC(=CC(=C3C2=O)O)O)C4=CC=C(C=C4)O)O)O)O 418.30 unknown https://doi.org/10.1016/S0031-9422(00)00227-2
Quercitrin 5280459 Click to see CC1C(C(C(C(O1)OC2=C(OC3=CC(=CC(=C3C2=O)O)O)C4=CC(=C(C=C4)O)O)O)O)O 448.40 unknown https://doi.org/10.1016/S0305-1978(02)00180-1
> Phenylpropanoids and polyketides / Flavonoids / O-methylated flavonoids / 5-O-methylated flavonoids
Alpinetin 154279 Click to see COC1=CC(=CC2=C1C(=O)CC(O2)C3=CC=CC=C3)O 270.28 unknown via CMAUP database
> Phenylpropanoids and polyketides / Flavonoids / O-methylated flavonoids / 7-O-methylated flavonoids
5-Hydroxy-7-methoxy-2-phenylchroman-4-one 73201 Click to see COC1=CC(=C2C(=O)CC(OC2=C1)C3=CC=CC=C3)O 270.28 unknown via CMAUP database
> Phenylpropanoids and polyketides / Linear 1,3-diarylpropanoids / Chalcones and dihydrochalcones / 2-Hydroxychalcones
Cardamonin 641785 Click to see COC1=CC(=CC(=C1C(=O)C=CC2=CC=CC=C2)O)O 270.28 unknown via CMAUP database
Pinostrobin chalcone 5316793 Click to see COC1=CC(=C(C(=C1)O)C(=O)C=CC2=CC=CC=C2)O 270.28 unknown via CMAUP database

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