Yadanziolide B

Details

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Internal ID b21469f1-3c8a-4f11-8b46-9075d263fa37
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Quassinoids
IUPAC Name (1R,2R,3R,6S,7R,8S,12S,13S,14R,15R,16S,17R)-2,3,7,12,15,16-hexahydroxy-17-(hydroxymethyl)-9,13-dimethyl-5,18-dioxapentacyclo[12.5.0.01,6.02,17.08,13]nonadec-9-ene-4,11-dione
SMILES (Canonical) CC1=CC(=O)C(C2(C1C(C3C45C2C(C(C(C4(C(C(=O)O3)O)O)(OC5)CO)O)O)O)C)O
SMILES (Isomeric) CC1=CC(=O)[C@H]([C@]2([C@H]1[C@H]([C@@H]3[C@]45[C@@H]2[C@H]([C@@H]([C@]([C@@]4([C@H](C(=O)O3)O)O)(OC5)CO)O)O)O)C)O
InChI InChI=1S/C20H26O11/c1-6-3-7(22)12(25)17(2)8(6)9(23)15-18-5-30-19(4-21,13(26)10(24)11(17)18)20(18,29)14(27)16(28)31-15/h3,8-15,21,23-27,29H,4-5H2,1-2H3/t8-,9-,10-,11-,12-,13+,14+,15-,17+,18+,19-,20+/m1/s1
InChI Key QPBBQXZJTIVCTO-VWXLKGNHSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C20H26O11
Molecular Weight 442.40 g/mol
Exact Mass 442.14751164 g/mol
Topological Polar Surface Area (TPSA) 194.00 Ų
XlogP -3.90
Atomic LogP (AlogP) -4.01
H-Bond Acceptor 11
H-Bond Donor 7
Rotatable Bonds 1

Synonyms

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95258-13-2
CHEBI:68932
(1R,2R,3R,6S,7R,8S,12S,13S,14R,15R,16S,17R)-2,3,7,12,15,16-hexahydroxy-17-(hydroxymethyl)-9,13-dimethyl-5,18-dioxapentacyclo[12.5.0.01,6.02,17.08,13]nonadec-9-ene-4,11-dione
CHEMBL1923105
HY-N8399
AKOS040760760
CS-0144048
Q27137286
(1beta,6alpha,11beta,12alpha,15beta)-1,6,11,12,14,15,21-heptahydroxy-13,20-epoxypicras-3-ene-2,16-dione

2D Structure

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2D Structure of Yadanziolide B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5797 57.97%
Caco-2 - 0.8534 85.34%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.7944 79.44%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8798 87.98%
OATP1B3 inhibitior + 0.9628 96.28%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.5258 52.58%
P-glycoprotein inhibitior - 0.7016 70.16%
P-glycoprotein substrate + 0.5533 55.33%
CYP3A4 substrate + 0.6423 64.23%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8958 89.58%
CYP3A4 inhibition - 0.9291 92.91%
CYP2C9 inhibition - 0.9003 90.03%
CYP2C19 inhibition - 0.8881 88.81%
CYP2D6 inhibition - 0.9488 94.88%
CYP1A2 inhibition - 0.9249 92.49%
CYP2C8 inhibition - 0.7819 78.19%
CYP inhibitory promiscuity - 0.9270 92.70%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5840 58.40%
Eye corrosion - 0.9884 98.84%
Eye irritation - 0.9470 94.70%
Skin irritation - 0.6915 69.15%
Skin corrosion - 0.9378 93.78%
Ames mutagenesis - 0.6418 64.18%
Human Ether-a-go-go-Related Gene inhibition - 0.6224 62.24%
Micronuclear - 0.7400 74.00%
Hepatotoxicity + 0.5211 52.11%
skin sensitisation - 0.8627 86.27%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.7375 73.75%
Nephrotoxicity + 0.7790 77.90%
Acute Oral Toxicity (c) III 0.4095 40.95%
Estrogen receptor binding + 0.8591 85.91%
Androgen receptor binding + 0.7234 72.34%
Thyroid receptor binding + 0.5949 59.49%
Glucocorticoid receptor binding + 0.6855 68.55%
Aromatase binding + 0.6646 66.46%
PPAR gamma + 0.5353 53.53%
Honey bee toxicity - 0.8386 83.86%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity + 0.9215 92.15%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.29% 91.11%
CHEMBL2581 P07339 Cathepsin D 92.90% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.09% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.81% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.55% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.67% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.56% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.93% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.99% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.39% 95.89%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 81.37% 85.14%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.04% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.96% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asplenium normale
Brucea javanica
Brucea mollis
Carpobrotus edulis
Castanea crenata
Centrolobium tomentosum
Ceratophyllum submersum
Dracocephalum kotschyi
Lippia carviodora
Myrica nana
Psilostrophe cooperi
Sideritis tragoriganum
Solanum jamaicense
Trifolium alexandrinum

Cross-Links

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PubChem 11744055
NPASS NPC122033
ChEMBL CHEMBL1923105
LOTUS LTS0107896
wikiData Q27137286